Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002920g0030 Nicotiana tabacum HOM05D004922 ORTHO05D005990 3.5e-61 238.0 114 100.0
Nitab4.5_0003904g0020 Nicotiana tabacum HOM05D004922 ORTHO05D005990 2.5e-43 178.7 88 98.9
Ah.06g191400 Amaranthus hybridus HOM05D004922 ORTHO05D005990 2.0e-40 169.1 83 97.6
MD05G1178700 Malus domestica HOM05D004922 ORTHO05D005990 9.8e-40 166.8 83 95.2
Actinidia35950 Actinidia chinensis HOM05D004922 ORTHO05D005990 1.3e-39 166.4 87 93.1
Nn7g37520 Nelumbo nucifera HOM05D004922 ORTHO05D005990 1.3e-39 166.4 87 93.1
SalBow3G3780 Salvia bowleyana HOM05D004922 ORTHO05D005990 1.3e-39 166.4 87 93.1
EL10Ac4g08876 Beta vulgaris HOM05D004922 ORTHO05D005990 1.7e-39 166.0 83 96.4
CAN.G500.78 Capsicum annuum HOM05D004922 ORTHO05D005990 1.7e-39 166.0 83 96.4
Peaxi162Scf00122g00811 Petunia axillaris HOM05D004922 ORTHO05D005990 1.7e-39 166.0 83 96.4
Prupe.8G205100 Prunus persica HOM05D004922 ORTHO05D005990 1.7e-39 166.0 85 92.9
Solyc09g091500.3 Solanum lycopersicum HOM05D004922 ORTHO05D005990 1.7e-39 166.0 83 96.4
Sopen09g034430 Solanum pennellii HOM05D004922 ORTHO05D005990 1.7e-39 166.0 83 96.4
PGSC0003DMG400029651 Solanum tuberosum HOM05D004922 ORTHO05D005990 1.7e-39 166.0 83 96.4
CSS0022478 Camellia sinensis var. sinensis HOM05D004922 ORTHO05D005990 2.9e-39 165.2 87 92.0
CSS0038803 Camellia sinensis var. sinensis HOM05D004922 ORTHO05D005990 2.9e-39 165.2 87 92.0
MD10G1167200 Malus domestica HOM05D004922 ORTHO05D005990 2.9e-39 165.2 83 94.0
Sc05g0002390 Simmondsia chinensis HOM05D004922 ORTHO05D005990 3.7e-39 164.9 83 95.2
CiPaw.03G151500 Carya illinoinensis HOM05D004922 ORTHO05D005990 6.4e-39 164.1 87 90.8
Haze_24774 Corylus avellana HOM05D004922 ORTHO05D005990 6.4e-39 164.1 87 90.8
ECA236G1627 Erigeron canadensis HOM05D004922 ORTHO05D005990 6.4e-39 164.1 85 91.8
CANSAT01G0689 Cannabis sativa HOM05D004922 ORTHO05D005990 1.4e-38 162.9 85 91.8
CANSAT01G1757 Cannabis sativa HOM05D004922 ORTHO05D005990 1.4e-38 162.9 85 91.8
Sed0024440 Sechium edule HOM05D004922 ORTHO05D005990 1.9e-38 162.5 85 92.9
SMO118G0467 Selaginella moellendorffii HOM05D004922 ORTHO05D005990 1.9e-38 162.5 81 95.1
TPR.G1594 Trifolium pratense HOM05D004922 ORTHO05D005990 1.9e-38 162.5 85 92.9
Atru.chr8.785 Acer truncatum HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
arahy.Tifrunner.gnm1.ann1.AXK6HV Arachis hypogaea HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
arahy.Tifrunner.gnm1.ann1.N94L43 Arachis hypogaea HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
Ca_18278_v3 Cicer arietinum L. HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
Cc01_g17260 Coffea canephora HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
COL.COLO4_37469 Corchorus olitorius HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
Dinv04668 Davidia involucrata HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
Duzib138G1451 Durio zibethinus HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
Gohir.A07G155600 Gossypium hirsutum HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
Gohir.A11G136000 Gossypium hirsutum HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
Gohir.D11G142400 Gossypium hirsutum HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
Gorai.001G185300 Gossypium raimondii HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
Gorai.007G152700 Gossypium raimondii HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
HanXRQChr04g0110651 Helianthus annuus HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 90.6
Hma1.2p1_1061F.1_g253320 Hydrangea macrophylla HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
Lsat_1_v5_gn_8_90161 Lactuca sativa HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 90.6
Manes.12G042100 Manihot esculenta HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
Manes.13G044200 Manihot esculenta HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
Medtr4g094600 Medicago truncatula HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
Psat7g092040 Pisum sativum HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
QL09p007931 Quercus lobata HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
QL09p044611 Quercus lobata HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
Sed0006654 Sechium edule HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
Thecc.01G228800 Theobroma cacao HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
TPR.G4933 Trifolium pratense HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
TWI09G0408 Tripterygium wilfordii HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
TWI59G0402 Tripterygium wilfordii HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
TAR365G0710 Trochodendron aralioides HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
TAR636G3017 Trochodendron aralioides HOM05D004922 ORTHO05D005990 2.4e-38 162.2 85 91.8
ClCG07G001790 Citrullus lanatus HOM05D004922 ORTHO05D005990 3.2e-38 161.8 85 90.6
Migut.N00343 Erythranthe guttata HOM05D004922 ORTHO05D005990 3.2e-38 161.8 83 92.8
Gohir.D07G162000 Gossypium hirsutum HOM05D004922 ORTHO05D005990 3.2e-38 161.8 85 90.6
PSO210G2196 Papaver somniferum HOM05D004922 ORTHO05D005990 3.2e-38 161.8 85 92.9
PSO591G0020 Papaver somniferum HOM05D004922 ORTHO05D005990 3.2e-38 161.8 85 92.9
PSO832G2289 Papaver somniferum HOM05D004922 ORTHO05D005990 3.2e-38 161.8 85 92.9
Potri.001G277900 Populus trichocarpa HOM05D004922 ORTHO05D005990 3.2e-38 161.8 87 89.7
Potri.009G072500 Populus trichocarpa HOM05D004922 ORTHO05D005990 3.2e-38 161.8 87 89.7
Sabra16G0171900 Salix brachista HOM05D004922 ORTHO05D005990 3.2e-38 161.8 87 89.7
Aqoxy1G00374 Aquilegia oxysepala HOM05D004922 ORTHO05D005990 4.1e-38 161.4 85 92.9
CDE02G4734 Ceratophyllum demersum HOM05D004922 ORTHO05D005990 4.1e-38 161.4 85 91.8
Eucgr.H03678 Eucalyptus grandis HOM05D004922 ORTHO05D005990 4.1e-38 161.4 81 95.1
HanXRQChr10g0287281 Helianthus annuus HOM05D004922 ORTHO05D005990 4.1e-38 161.4 81 93.8
Phvul.001G007400 Phaseolus vulgaris HOM05D004922 ORTHO05D005990 4.1e-38 161.4 81 95.1
Phvul.002G196500 Phaseolus vulgaris HOM05D004922 ORTHO05D005990 4.1e-38 161.4 81 95.1
PGR044G2430 Punica granatum HOM05D004922 ORTHO05D005990 4.1e-38 161.4 81 95.1
RcHm_v2.0_Chr2g0121221 Rosa chinensis HOM05D004922 ORTHO05D005990 4.1e-38 161.4 81 95.1
THA.LOC104818942 Tarenaya hassleriana HOM05D004922 ORTHO05D005990 4.1e-38 161.4 81 95.1
THA.LOC104827350 Tarenaya hassleriana HOM05D004922 ORTHO05D005990 4.1e-38 161.4 81 95.1
Dinv19219 Davidia involucrata HOM05D004922 ORTHO05D005990 5.4e-38 161.0 85 90.6
Duzib133G0821 Durio zibethinus HOM05D004922 ORTHO05D005990 5.4e-38 161.0 85 90.6
Lalb_Chr07g0188871 Lupinus albus HOM05D004922 ORTHO05D005990 5.4e-38 161.0 85 90.6
GSVIVG01029076001 Vitis vinifera HOM05D004922 ORTHO05D005990 5.4e-38 161.0 85 91.8
CARHR182850 Cardamine hirsuta HOM05D004922 ORTHO05D005990 7.1e-38 160.6 83 92.8
MELO3C018062.2 Cucumis melo HOM05D004922 ORTHO05D005990 7.1e-38 160.6 94 85.1
CsaV3_3G028790 Cucumis sativus L. HOM05D004922 ORTHO05D005990 7.1e-38 160.6 94 85.1
Sp2g19260 Schrenkiella parvula HOM05D004922 ORTHO05D005990 7.1e-38 160.6 83 92.8
Lj4g0004779 Lotus japonicus HOM05D004922 ORTHO05D005990 9.2e-38 160.2 85 90.6
HPP92_027867 Vanilla planifolia HOM05D004922 ORTHO05D005990 9.2e-38 160.2 81 93.8
Glyma.05G127900 Glycine max HOM05D004922 ORTHO05D005990 1.2e-37 159.8 81 93.8
Mapoly0016s0054 Marchantia polymorpha HOM05D004922 ORTHO05D005990 1.2e-37 159.8 81 92.6
Os05g0389300 Oryza sativa ssp. japonica HOM05D004922 ORTHO05D005990 1.6e-37 159.5 83 92.8
SEGI_22867 Sequoiadendron giganteum HOM05D004922 ORTHO05D005990 1.6e-37 159.5 81 93.8
Zm00001eb287110 Zea mays HOM05D004922 ORTHO05D005990 1.6e-37 159.5 83 92.8
Zm00001eb350780 Zea mays HOM05D004922 ORTHO05D005990 1.6e-37 159.5 83 92.8
Ciclev10022785m.g Citrus clementina HOM05D004922 ORTHO05D005990 2.1e-37 159.1 85 89.4
FvH4_1g24390 Fragaria vesca HOM05D004922 ORTHO05D005990 2.7e-37 158.7 81 92.6
FAN19G2048 Fragaria x ananassa HOM05D004922 ORTHO05D005990 2.7e-37 158.7 81 92.6
FAN23G2197 Fragaria x ananassa HOM05D004922 ORTHO05D005990 2.7e-37 158.7 81 92.6
FAN28G0422 Fragaria x ananassa HOM05D004922 ORTHO05D005990 2.7e-37 158.7 81 92.6
Lalb_Chr13g0291421 Lupinus albus HOM05D004922 ORTHO05D005990 2.7e-37 158.7 85 89.4
Pp3c1_36020 Physcomitrium patens HOM05D004922 ORTHO05D005990 2.7e-37 158.7 83 90.4
AagrBONN_evm.TU.Sc2ySwM_228.5635 Anthoceros agrestis HOM05D004922 ORTHO05D005990 3.5e-37 158.3 80 93.8
AT5G48870 Arabidopsis thaliana HOM05D004922 ORTHO05D005990 3.5e-37 158.3 81 93.8
Thhalv10005202m.g Eutrema salsugineum HOM05D004922 ORTHO05D005990 3.5e-37 158.3 81 93.8
CSS0043203 Camellia sinensis var. sinensis HOM05D004922 ORTHO05D005990 4.6e-37 157.9 85 89.4
Carub.0008s0859 Capsella rubella HOM05D004922 ORTHO05D005990 4.6e-37 157.9 81 92.6
Migut.D00519 Erythranthe guttata HOM05D004922 ORTHO05D005990 7.8e-37 157.1 81 91.4
Lalb_Chr11g0067741 Lupinus albus HOM05D004922 ORTHO05D005990 7.8e-37 157.1 85 87.1
AL8G22040 Arabidopsis lyrata HOM05D004922 ORTHO05D005990 1.3e-36 156.4 81 92.6
BcaB07g30046 Brassica carinata HOM05D004922 ORTHO05D005990 1.7e-36 156.0 83 92.8
BcaC03g17679 Brassica carinata HOM05D004922 ORTHO05D005990 1.7e-36 156.0 83 92.8
BcaC04g23758 Brassica carinata HOM05D004922 ORTHO05D005990 1.7e-36 156.0 83 92.8
A02p37760 Brassica napus HOM05D004922 ORTHO05D005990 1.7e-36 156.0 83 92.8
A09p04660 Brassica napus HOM05D004922 ORTHO05D005990 1.7e-36 156.0 83 92.8
C02p56860 Brassica napus HOM05D004922 ORTHO05D005990 1.7e-36 156.0 83 92.8
C09p04970 Brassica napus HOM05D004922 ORTHO05D005990 1.7e-36 156.0 83 92.8
BolC2t11755H Brassica oleracea HOM05D004922 ORTHO05D005990 1.7e-36 156.0 83 92.8
BraA02t08759Z Brassica rapa HOM05D004922 ORTHO05D005990 1.7e-36 156.0 83 92.8
BraA09t36102Z Brassica rapa HOM05D004922 ORTHO05D005990 1.7e-36 156.0 83 92.8
BcaB04g19588 Brassica carinata HOM05D004922 ORTHO05D005990 2.3e-36 155.6 83 90.4
BolC9t53426H Brassica oleracea HOM05D004922 ORTHO05D005990 2.3e-36 155.6 83 91.6
Peaxi162Scf00047g01222 Petunia axillaris HOM05D004922 ORTHO05D005990 2.3e-36 155.6 79 94.9
Sabra09G0054700 Salix brachista HOM05D004922 ORTHO05D005990 2.3e-36 155.6 84 88.1
Rhsim02G0053600 Rhododendron simsii HOM05D004922 ORTHO05D005990 8.6e-36 153.7 83 90.4
CiPaw.04G107000 Carya illinoinensis HOM05D004922 ORTHO05D005990 1.1e-35 153.3 79 92.4
Aa31LG5G17580 Aethionema arabicum HOM05D004922 ORTHO05D005990 1.5e-35 152.9 79 92.4
unitig_22.g5302 Utricularia gibba HOM05D004922 ORTHO05D005990 1.9e-35 152.5 85 84.7
Glyma.08G082700 Glycine max HOM05D004922 ORTHO05D005990 2.5e-35 152.1 77 94.8
DCAR_000537 Daucus carota HOM05D004922 ORTHO05D005990 3.3e-35 151.8 98 79.6
unitig_8.g3754 Utricularia gibba HOM05D004922 ORTHO05D005990 4.3e-35 151.4 84 84.5
MCO15G079 Micromonas commoda HOM05D004922 ORTHO05D005990 7.3e-35 150.6 81 84.0
Cpa.g.sc3.67 Carica papaya HOM05D004922 ORTHO05D005990 1.2e-34 149.8 76 93.4
FAN26G0321 Fragaria x ananassa HOM05D004922 ORTHO05D005990 4.7e-34 147.9 76 92.1
FAN26G0401 Fragaria x ananassa HOM05D004922 ORTHO05D005990 4.7e-34 147.9 76 92.1
PRCOL_00003510 Prasinoderma coloniale HOM05D004922 ORTHO05D005990 3.1e-33 145.2 83 75.9
Lj6C614G9 Lonicera japonica HOM05D003979 ORTHO05D005530 8.9e-33 143.7 75 92.0
Actinidia39954 Actinidia chinensis HOM05D004922 ORTHO05D005990 3.3e-27 125.2 81 82.7
SGA_v2.0_scaffold8G04653 Striga asiatica HOM05D004922 ORTHO05D005990 9.6e-27 123.6 107 62.6
HPP92_006337 Vanilla planifolia HOM05D004922 ORTHO05D005990 1.2e-26 123.2 81 77.8
CDE05G0301 Ceratophyllum demersum HOM05D004922 ORTHO05D005990 1.8e-25 119.4 58 98.3
Haze_26353 Corylus avellana HOM05D004922 ORTHO05D005990 5.8e-24 114.4 80 61.2
AUR62033984 Chenopodium quinoa HOM05D004922 ORTHO05D005990 9.9e-24 113.6 57 94.7
Oeu016707.1 Olea europaea HOM05D004922 ORTHO05D005990 1.1e-22 110.2 53 100.0
HanXRQChr11g0331491 Helianthus annuus HOM05D004922 ORTHO05D005990 1.2e-21 106.7 57 89.5
ATR0580G296 Amborella trichopoda HOM05D004922 ORTHO05D005990 2.1e-21 105.9 53 96.2
CARHR182860 Cardamine hirsuta HOM05D004922 ORTHO05D005990 4.6e-21 104.8 70 78.6
MD00G1053800 Malus domestica HOM05D004922 ORTHO05D005990 4.6e-21 104.8 53 92.5
MD10G1019300 Malus domestica HOM05D004922 ORTHO05D005990 7.8e-21 104.0 53 92.5
DCAR_023130 Daucus carota HOM05D004922 ORTHO05D005990 3.0e-20 102.1 53 92.5
Hund05521 Selenicereus undatus HOM05D004922 ORTHO05D005990 3.9e-20 101.7 50 96.0
Atru.chr10.1425 Acer truncatum HOM05D004922 ORTHO05D005990 5.6e-19 97.8 51 90.2
EL10Ac1g01454 Beta vulgaris HOM05D004922 ORTHO05D005990 8.1e-10 67.4 31 100.0
TPR.G35576 Trifolium pratense HOM05D004922 ORTHO05D005990 5.3e-09 64.7 85 45.9


User provided reference genes

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