Gene: Thecc.01G228800

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.01G228800
  • Transcript Identifier Thecc.01G228800.1
  • Gene Type Coding gene
  • Location Chromosome_1 : 18488453-18489950 : positive

Gene Family Information

  • ID HOM05D004922
  • #Genes/#Species 151/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.01G228800.v2.1
  • pacid 42014663
  • ancestorIdentifier Thecc1EG003004.CGDv1.1
  • ancestorIdentifier Thecc1EG003004t1.CGDv1.1

Descriptions

  • Description Small nuclear ribonucleoprotein family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G48870
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G48870

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G48870

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033871 Sm-like protein LSm5
IPR001163 LSM domain, eukaryotic/archaea-type
IPR010920 LSM domain superfamily
Mapman id Description
16.2.3.5 RNA processing.pre-mRNA splicing.U6-associated LSm accessory ribonucleoprotein complex.component LSm5