Gene: Carub.0008s0859

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s0859
  • Transcript Identifier Carub.0008s0859.1
  • Gene Type Coding gene
  • Location scaffold_8 : 5628158-5629692 : positive

Gene Family Information

  • ID HOM05D004922
  • #Genes/#Species 151/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s0859.v1.1
  • pacid 39250635
  • synonym Carubv10027453m.g

Descriptions

  • Description K12624 - U6 snRNA-associated Sm-like protein LSm5 (LSM5)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G48870
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G48870

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G48870

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010920 LSM domain superfamily
IPR033871 Sm-like protein LSm5
IPR001163 LSM domain, eukaryotic/archaea-type
Mapman id Description
16.2.3.5 RNA processing.pre-mRNA splicing.U6-associated LSm accessory ribonucleoprotein complex.component LSm5