Gene: Lj6C614G9

General Information

Structural Information

  • Species Lonicera japonica
  • Gene Identifier Lj6C614G9
  • Transcript Identifier Lj6C614G9.1
  • Gene Type Coding gene
  • Location GWHAAZE00000006 : 61468600-61481318 : negative

Gene Family Information

  • ID HOM05D003979
  • #Genes/#Species 176/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Lj6C614G9.1
  • Accession GWHGAAZE021788
  • Accession GWHTAAZE021812

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT3G23940
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT3G23940
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT3G23940
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT3G23940
GO:0009082
ISO
PLAZA Integrative Orthologybranched-chain amino acid biosynthetic process AT3G23940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0016836
ISO
PLAZA Integrative Orthologyhydro-lyase activity AT3G23940
GO:0005507
ISO
PLAZA Integrative Orthologycopper ion binding AT3G23940
GO:0004160
ISO
PLAZA Homology (enrichment)dihydroxy-acid dehydratase activity HOM05D003979

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G23940
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G23940
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT3G23940

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037237 IlvD/EDD, N-terminal domain
IPR010920 LSM domain superfamily
IPR033871 Sm-like protein LSm5
IPR001163 LSM domain, eukaryotic/archaea-type
IPR042096 Dihydroxy-acid dehydratase, C-terminal
IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase
Mapman id Description
16.2.3.5 RNA processing.pre-mRNA splicing.U6-associated LSm accessory ribonucleoprotein complex.component LSm5
4.1.2.2.8.5 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.isoleucine.dihydroxy-acid dehydratase
4.1.3.2.3 Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.dihydroxy-acid dehydratase