Gene: TPR.G1594

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G1594
  • Transcript Identifier TPR.T1622
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_scaf_74 : 40252-41476 : positive

Gene Family Information

  • ID HOM05D004922
  • #Genes/#Species 151/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA1622.v2
  • id Tp57577_TGAC_v2_gene1594.v2
  • pacid 35952619
  • uniprot A0A2K3MIH0

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G48870
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G48870

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G48870

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005681
IEA
GOA Databasespliceosomal complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001163 LSM domain, eukaryotic/archaea-type
IPR033871 Sm-like protein LSm5
IPR010920 LSM domain superfamily
Mapman id Description
16.2.3.5 RNA processing.pre-mRNA splicing.U6-associated LSm accessory ribonucleoprotein complex.component LSm5