Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002719g0090 Nicotiana tabacum HOM05D005565 ORTHO05D006950 8.4e-87 323.9 198 100.0
Nitab4.5_0004596g0030 Nicotiana tabacum HOM05D005565 ORTHO05D006950 1.5e-48 196.8 98 98.0
Lalb_Chr05g0219831 Lupinus albus HOM05D005565 ORTHO05D006950 3.4e-48 195.7 235 48.9
Peaxi162Scf00670g00348 Petunia axillaris HOM05D005565 ORTHO05D006950 5.9e-48 194.9 98 94.9
Sopen02g018950 Solanum pennellii HOM05D005565 ORTHO05D006950 1.3e-47 193.7 392 41.3
SGA_v2.0_scaffold223G42860 Striga asiatica HOM05D005565 ORTHO05D006950 1.3e-47 193.7 122 78.7
CAN.G954.26 Capsicum annuum HOM05D005565 ORTHO05D006950 1.7e-47 193.4 98 94.9
Solyc02g069790.3 Solanum lycopersicum HOM05D005565 ORTHO05D006950 2.2e-47 193.0 394 43.7
PGSC0003DMG400021191 Solanum tuberosum HOM05D005565 ORTHO05D006950 2.2e-47 193.0 388 43.8
Migut.H01333 Erythranthe guttata HOM05D005565 ORTHO05D006950 4.2e-46 188.7 97 90.7
SGA_v2.0_scaffold1G00240 Striga asiatica HOM05D005565 ORTHO05D006950 4.2e-46 188.7 123 76.4
MSTRG.14795 Avicennia marina HOM05D005565 ORTHO05D006950 3.6e-45 185.7 97 90.7
Oeu015183.1 Olea europaea HOM05D005565 ORTHO05D006950 6.1e-45 184.9 97 90.7
Oeu041100.1 Olea europaea HOM05D005565 ORTHO05D006950 3.9e-44 182.2 97 87.6
AUR62042519 Chenopodium quinoa HOM05D005565 ORTHO05D006950 6.7e-44 181.4 289 40.5
Cc09_g08070 Coffea canephora HOM05D005565 ORTHO05D006950 1.1e-43 180.6 98 85.7
Hma1.2p1_0333F.1_g128290 Hydrangea macrophylla HOM05D005565 ORTHO05D006950 6.3e-42 174.9 98 85.7
ECA240G3173 Erigeron canadensis HOM05D005565 ORTHO05D006950 8.2e-42 174.5 97 84.5
unitig_21.g20207 Utricularia gibba HOM05D003481 ORTHO05D004001 1.8e-41 173.3 95 85.3
Hma1.2p1_0333F.1_g128300 Hydrangea macrophylla HOM05D005565 ORTHO05D006950 2.4e-41 172.9 97 85.6
HanXRQChr01g0003371 Helianthus annuus HOM05D005565 ORTHO05D006950 3.1e-41 172.6 97 83.5
Lsat_1_v5_gn_1_117781 Lactuca sativa HOM05D005565 ORTHO05D006950 3.1e-41 172.6 97 83.5
CSS0026797 Camellia sinensis var. sinensis HOM05D005565 ORTHO05D006950 1.5e-40 170.2 98 82.7
CDE10G1222 Ceratophyllum demersum HOM05D005565 ORTHO05D006950 1.5e-40 170.2 241 46.1
Sabra16G0245100 Salix brachista HOM05D005565 ORTHO05D006950 3.4e-40 169.1 98 81.6
CDE10G1151 Ceratophyllum demersum HOM05D005565 ORTHO05D006950 4.5e-40 168.7 114 71.1
DCAR_027864 Daucus carota HOM05D005565 ORTHO05D006950 4.5e-40 168.7 97 82.5
Dinv06439 Davidia involucrata HOM05D005565 ORTHO05D006950 4.5e-40 168.7 97 82.5
Gohir.A10G003700 Gossypium hirsutum HOM05D005565 ORTHO05D006950 5.9e-40 168.3 125 67.2
Prupe.4G089800 Prunus persica HOM05D005565 ORTHO05D006950 5.9e-40 168.3 97 80.4
Duzib192G0128 Durio zibethinus HOM05D005565 ORTHO05D006950 7.7e-40 167.9 125 67.2
Eucgr.D00186 Eucalyptus grandis HOM05D005565 ORTHO05D006950 7.7e-40 167.9 98 81.6
Lj1A1162G46 Lonicera japonica HOM05D005565 ORTHO05D006950 7.7e-40 167.9 97 81.4
MD10G1253700 Malus domestica HOM05D005565 ORTHO05D006950 7.7e-40 167.9 97 79.4
Potri.011G098100 Populus trichocarpa HOM05D005565 ORTHO05D006950 7.7e-40 167.9 98 80.6
Gorai.011G004100 Gossypium raimondii HOM05D005565 ORTHO05D006950 1.0e-39 167.5 125 66.4
Manes.06G055100 Manihot esculenta HOM05D005565 ORTHO05D006950 1.0e-39 167.5 98 80.6
RcHm_v2.0_Chr5g0015891 Rosa chinensis HOM05D005565 ORTHO05D006950 1.0e-39 167.5 97 80.4
Actinidia13472 Actinidia chinensis HOM05D005565 ORTHO05D006950 1.7e-39 166.8 98 79.6
Sabra11G0084800 Salix brachista HOM05D005565 ORTHO05D006950 1.7e-39 166.8 99 79.8
Sc17g0004650 Simmondsia chinensis HOM05D005565 ORTHO05D006950 1.7e-39 166.8 98 79.6
HPP92_019891 Vanilla planifolia HOM05D005565 ORTHO05D006950 1.7e-39 166.8 97 78.4
FvH4_3g10030 Fragaria vesca HOM05D005565 ORTHO05D006950 2.2e-39 166.4 97 79.4
FAN11G0475 Fragaria x ananassa HOM05D005565 ORTHO05D006950 2.2e-39 166.4 97 79.4
MD05G1274000 Malus domestica HOM05D005565 ORTHO05D006950 2.2e-39 166.4 97 78.4
Ca_18788_v3 Cicer arietinum L. HOM05D005565 ORTHO05D006950 2.9e-39 166.0 97 79.4
Psat7g132960 Pisum sativum HOM05D005565 ORTHO05D006950 2.9e-39 166.0 97 79.4
Potri.001G372600 Populus trichocarpa HOM05D005565 ORTHO05D006950 3.8e-39 165.6 98 79.6
GSVIVG01021628001 Vitis vinifera HOM05D005565 ORTHO05D006950 3.8e-39 165.6 97 79.4
COL.COLO4_26828 Corchorus olitorius HOM05D005565 ORTHO05D006950 5.0e-39 165.2 125 64.0
MELO3C007079.2 Cucumis melo HOM05D005565 ORTHO05D006950 5.0e-39 165.2 97 78.4
CsaV3_6G052300 Cucumis sativus L. HOM05D005565 ORTHO05D006950 5.0e-39 165.2 97 78.4
Lj4g0020694 Lotus japonicus HOM05D005565 ORTHO05D006950 5.0e-39 165.2 97 79.4
Sabra11G0091000 Salix brachista HOM05D005565 ORTHO05D006950 5.0e-39 165.2 99 78.8
vmacro03395 Vaccinium macrocarpon HOM05D005565 ORTHO05D006950 5.0e-39 165.2 113 70.8
Cfa000824 Carpinus fangiana HOM05D005565 ORTHO05D006950 6.5e-39 164.9 125 64.8
FAN25G2018 Fragaria x ananassa HOM05D005565 ORTHO05D006950 6.5e-39 164.9 97 78.4
Phvul.002G100900 Phaseolus vulgaris HOM05D005565 ORTHO05D006950 6.5e-39 164.9 97 79.4
Thecc.06G001100 Theobroma cacao HOM05D005565 ORTHO05D006950 8.5e-39 164.5 97 78.4
CiPaw.10G085900 Carya illinoinensis HOM05D005565 ORTHO05D006950 1.1e-38 164.1 97 79.4
Glyma.20G024100 Glycine max HOM05D005565 ORTHO05D006950 1.1e-38 164.1 97 78.4
Medtr4g083380 Medicago truncatula HOM05D005565 ORTHO05D006950 1.1e-38 164.1 97 78.4
PGR083G1318 Punica granatum HOM05D005565 ORTHO05D006950 1.1e-38 164.1 98 78.6
Rhsim13G0120300 Rhododendron simsii HOM05D005565 ORTHO05D006950 1.1e-38 164.1 117 67.5
Sed0002078 Sechium edule HOM05D005565 ORTHO05D006950 1.1e-38 164.1 97 77.3
VMungo0251G3128 Vigna mungo HOM05D005565 ORTHO05D006950 1.1e-38 164.1 97 78.4
EL10Ac8g19576 Beta vulgaris HOM05D005565 ORTHO05D006950 1.9e-38 163.3 97 76.3
CANSAT35G0106 Cannabis sativa HOM05D005565 ORTHO05D006950 1.9e-38 163.3 97 79.4
Haze_05809 Corylus avellana HOM05D005565 ORTHO05D006950 1.9e-38 163.3 97 78.4
FAN16G1178 Fragaria x ananassa HOM05D005565 ORTHO05D006950 1.9e-38 163.3 97 78.4
Zm00001eb315350 Zea mays HOM05D005565 ORTHO05D006950 1.9e-38 163.3 97 76.3
Atru.chr10.872 Acer truncatum HOM05D005565 ORTHO05D006950 2.5e-38 162.9 97 78.4
Aqoxy1G01543 Aquilegia oxysepala HOM05D005565 ORTHO05D006950 3.2e-38 162.5 97 77.3
QL05p061027 Quercus lobata HOM05D005565 ORTHO05D006950 3.2e-38 162.5 97 78.4
TWI53G0754 Tripterygium wilfordii HOM05D005565 ORTHO05D006950 3.2e-38 162.5 98 77.6
FAN21G3355 Fragaria x ananassa HOM05D005565 ORTHO05D006950 5.5e-38 161.8 97 77.3
Glyma.07G224200 Glycine max HOM05D005565 ORTHO05D006950 5.5e-38 161.8 97 77.3
ATR0165G027 Amborella trichopoda HOM05D005565 ORTHO05D006950 7.2e-38 161.4 97 78.4
arahy.Tifrunner.gnm1.ann1.59WFQY Arachis hypogaea HOM05D005565 ORTHO05D006950 7.2e-38 161.4 97 77.3
arahy.Tifrunner.gnm1.ann1.V3UUHR Arachis hypogaea HOM05D005565 ORTHO05D006950 7.2e-38 161.4 97 77.3
Zm00001eb376390 Zea mays HOM05D005565 ORTHO05D006950 7.2e-38 161.4 97 74.2
TAR626G1362 Trochodendron aralioides HOM05D005565 ORTHO05D006950 9.4e-38 161.0 97 77.3
A09p35980 Brassica napus HOM05D005565 ORTHO05D006950 1.6e-37 160.2 98 77.6
BraA09t39122Z Brassica rapa HOM05D005565 ORTHO05D006950 1.6e-37 160.2 98 77.6
Cpa.g.sc17.91 Carica papaya HOM05D005565 ORTHO05D006950 1.6e-37 160.2 97 76.3
SHI20681 Sapria himalayana HOM05D005565 ORTHO05D006950 1.6e-37 160.2 98 75.5
SEGI_17605 Sequoiadendron giganteum HOM05D005565 ORTHO05D006950 1.6e-37 160.2 97 77.3
BcaB07g32657 Brassica carinata HOM05D005565 ORTHO05D006950 2.7e-37 159.5 98 77.6
C05p29480 Brassica napus HOM05D005565 ORTHO05D006950 2.7e-37 159.5 98 77.6
BolC5t31678H Brassica oleracea HOM05D005565 ORTHO05D006950 2.7e-37 159.5 98 77.6
Os01g0526100 Oryza sativa ssp. japonica HOM05D005565 ORTHO05D006950 2.7e-37 159.5 97 76.3
Sp1g26320 Schrenkiella parvula HOM05D005565 ORTHO05D006950 2.7e-37 159.5 98 77.6
THA.LOC104812687 Tarenaya hassleriana HOM05D005565 ORTHO05D006950 2.7e-37 159.5 98 74.5
AagrBONN_evm.TU.Sc2ySwM_228.4814 Anthoceros agrestis HOM05D005565 ORTHO05D006950 4.7e-37 158.7 95 77.9
Mapoly0023s0048 Marchantia polymorpha HOM05D005565 ORTHO05D006950 6.1e-37 158.3 95 78.9
Nn3g20239 Nelumbo nucifera HOM05D005565 ORTHO05D006950 6.1e-37 158.3 97 75.3
BcaNung05265 Brassica carinata HOM05D005565 ORTHO05D006950 1.0e-36 157.5 98 76.5
CANSAT35G0536 Cannabis sativa HOM05D005565 ORTHO05D006950 1.0e-36 157.5 97 78.4
ClCG01G025100 Citrullus lanatus HOM05D005565 ORTHO05D006950 1.0e-36 157.5 94 77.7
Pp3c2_18610 Physcomitrium patens HOM05D005565 ORTHO05D006950 1.0e-36 157.5 95 75.8
Aa31LG6G11740 Aethionema arabicum HOM05D005565 ORTHO05D006950 2.3e-36 156.4 98 76.5
AL1G44510 Arabidopsis lyrata HOM05D005565 ORTHO05D006950 3.0e-36 156.0 98 75.5
Thhalv10007861m.g Eutrema salsugineum HOM05D005565 ORTHO05D006950 3.0e-36 156.0 96 77.1
PSO541G0264 Papaver somniferum HOM05D005565 ORTHO05D006950 5.1e-36 155.2 97 73.2
PSO675G3222 Papaver somniferum HOM05D005565 ORTHO05D006950 5.1e-36 155.2 97 73.2
AT1G30480 Arabidopsis thaliana HOM05D005565 ORTHO05D006950 6.7e-36 154.8 98 74.5
CARHR029890 Cardamine hirsuta HOM05D005565 ORTHO05D006950 6.7e-36 154.8 98 74.5
Carub.0001s2870 Capsella rubella HOM05D005565 ORTHO05D006950 1.1e-35 154.1 98 74.5
BcaB07g32658 Brassica carinata HOM05D005565 ORTHO05D006950 2.0e-35 153.3 98 72.4
A08p24410 Brassica napus HOM05D005565 ORTHO05D006950 2.6e-35 152.9 95 76.8
C03p76800 Brassica napus HOM05D005565 ORTHO05D006950 2.6e-35 152.9 95 76.8
BolC3t19934H Brassica oleracea HOM05D005565 ORTHO05D006950 2.6e-35 152.9 95 76.8
BraA08t34396Z Brassica rapa HOM05D005565 ORTHO05D006950 2.6e-35 152.9 95 76.8
BcaC01g00198 Brassica carinata HOM05D005565 ORTHO05D006950 3.3e-35 152.5 95 76.8
BcaNung05264 Brassica carinata HOM05D005565 ORTHO05D006950 3.3e-35 152.5 95 76.8
MBI10_g00722_MAGBIO Magnolia biondii HOM05D005565 ORTHO05D006950 9.7e-35 151.0 92 78.3
C07p15100 Brassica napus HOM05D005565 ORTHO05D006950 1.1e-30 137.5 206 45.1
CBR_g29718 Chara braunii HOM05D005565 ORTHO05D006950 1.1e-30 137.5 94 70.2
SMO351G0200 Selaginella moellendorffii HOM05D005565 ORTHO05D006950 1.1e-30 137.5 93 69.9
Manes.14G122600 Manihot esculenta HOM05D005565 ORTHO05D006950 4.7e-29 132.1 91 68.1
MCO12G324 Micromonas commoda HOM05D005565 ORTHO05D006950 7.5e-27 124.8 92 63.0
Cre11.g467591 Chlamydomonas reinhardtii HOM05D005565 ORTHO05D006950 3.7e-26 122.5 93 62.4
BcaB07g32683 Brassica carinata HOM05D005565 ORTHO05D006950 6.3e-26 121.7 315 32.7
Haze_26712 Corylus avellana HOM05D005565 ORTHO05D006950 1.2e-24 117.5 92 59.8
SGA_v2.0_scaffold22G09881 Striga asiatica HOM05D005565 ORTHO05D006950 5.9e-24 115.2 98 60.2
vmacro03441 Vaccinium macrocarpon HOM05D005565 ORTHO05D006950 8.0e-21 104.8 79 67.1
Nitab4.5_0004596g0040 Nicotiana tabacum HOM05D005565 ORTHO05D006950 2.9e-15 86.3 55 87.3
CBR_g23080 Chara braunii HOM05D005565 ORTHO05D006950 1.9e-14 83.6 88 46.6
PRCOL_00005056 Prasinoderma coloniale HOM05D005565 ORTHO05D006950 9.4e-14 81.3 89 49.4
Haze_05807 Corylus avellana HOM05D005565 ORTHO05D006950 6.3e-10 68.6 58 69.0
AUR62027340 Chenopodium quinoa HOM05D005565 ORTHO05D006950 1.4e-09 67.4 56 60.7
Gohir.D10G003700 Gossypium hirsutum HOM05D005565 ORTHO05D006950 2.4e-09 66.6 58 65.5
Dinv23083 Davidia involucrata HOM05D005565 ORTHO05D006950 1.2e-08 64.3 58 62.1
TPR.G34068 Trifolium pratense HOM05D005565 ORTHO05D006950 7.7e-08 61.6 58 62.1
Dinv26814 Davidia involucrata HOM05D001563 ORTHO05D001956 1.3e-07 60.8 100 35.0
Lsat_1_v5_gn_4_153381 Lactuca sativa HOM05D001563 ORTHO05D012319 8.6e-07 58.2 92 35.9
Dinv20611 Davidia involucrata HOM05D001563 ORTHO05D001956 1.5e-06 57.4 87 35.6
DCAR_025929 Daucus carota HOM05D001563 ORTHO05D001956 2.5e-06 56.6 105 34.3
CANSAT01G0666 Cannabis sativa HOM05D001563 ORTHO05D001956 4.3e-06 55.8 103 32.0
CBR_g28575 Chara braunii HOM05D001563 ORTHO05D001956 4.3e-06 55.8 96 33.3
SGA_v2.0_scaffold2G01114 Striga asiatica HOM05D001563 ORTHO05D001956 5.6e-06 55.5 104 28.8
SGA_v2.0_scaffold221G42757 Striga asiatica HOM05D001563 ORTHO05D001956 9.5e-06 54.7 104 28.8


User provided reference genes

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