Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001277g0040 Nicotiana tabacum HOM05D002182 ORTHO05D004671 4.1e-124 448.0 212 100.0
Nitab4.5_0000120g0160 Nicotiana tabacum HOM05D002182 ORTHO05D004671 2.7e-83 312.4 155 95.5
CAN.G163.2 Capsicum annuum HOM05D002182 ORTHO05D004671 3.8e-69 265.4 138 89.1
Sopen05g009910 Solanum pennellii HOM05D002182 ORTHO05D004671 3.8e-69 265.4 139 88.5
Solyc05g014740.1 Solanum lycopersicum HOM05D002182 ORTHO05D004671 4.9e-69 265.0 129 94.6
vmacro12743 Vaccinium macrocarpon HOM05D002182 ORTHO05D004671 3.0e-66 255.8 132 88.6
Dinv35485 Davidia involucrata HOM05D002182 ORTHO05D004671 1.1e-65 253.8 138 84.8
Peaxi162Scf00151g00069 Petunia axillaris HOM05D002182 ORTHO05D004671 9.6e-65 250.8 146 82.9
Actinidia20029 Actinidia chinensis HOM05D002182 ORTHO05D004671 1.1e-63 247.3 144 81.9
FAN23G2071 Fragaria x ananassa HOM05D002182 ORTHO05D004671 4.1e-63 245.4 141 81.6
FAN19G2097 Fragaria x ananassa HOM05D002182 ORTHO05D004671 5.3e-63 245.0 141 81.6
Oeu050090.2 Olea europaea HOM05D002182 ORTHO05D004671 5.3e-63 245.0 128 85.9
Eucgr.H05141 Eucalyptus grandis HOM05D002182 ORTHO05D004671 6.9e-63 244.6 145 79.3
FAN26G0537 Fragaria x ananassa HOM05D002182 ORTHO05D004671 2.0e-62 243.0 141 80.9
HanXRQChr01g0016921 Helianthus annuus HOM05D002182 ORTHO05D004671 2.0e-62 243.0 145 77.9
Migut.H00803 Erythranthe guttata HOM05D002182 ORTHO05D004671 2.6e-62 242.7 145 76.6
FvH4_1g24710 Fragaria vesca HOM05D002182 ORTHO05D004671 4.5e-62 241.9 137 82.5
EL10Ac4g09621 Beta vulgaris HOM05D002182 ORTHO05D004671 5.8e-62 241.5 145 76.6
Ca_16979_v3 Cicer arietinum L. HOM05D002182 ORTHO05D004671 5.8e-62 241.5 137 81.0
arahy.Tifrunner.gnm1.ann1.XVSB6Y Arachis hypogaea HOM05D002182 ORTHO05D004671 7.6e-62 241.1 156 71.8
Lj4C830T7 Lonicera japonica HOM05D002182 ORTHO05D004671 7.6e-62 241.1 138 81.9
Prupe.4G275500 Prunus persica HOM05D002182 ORTHO05D004671 7.6e-62 241.1 137 81.8
GSVIVG01026461001 Vitis vinifera HOM05D002182 ORTHO05D004671 7.6e-62 241.1 137 81.8
Phvul.009G154850 Phaseolus vulgaris HOM05D002182 ORTHO05D004671 1.0e-61 240.7 145 76.6
Potri.005G067100 Populus trichocarpa HOM05D002182 ORTHO05D004671 1.3e-61 240.4 145 78.6
Lalb_Chr11g0068591 Lupinus albus HOM05D002182 ORTHO05D004671 1.7e-61 240.0 145 77.2
arahy.Tifrunner.gnm1.ann1.K5KUZ3 Arachis hypogaea HOM05D002182 ORTHO05D004671 2.2e-61 239.6 145 74.5
RcHm_v2.0_Chr2g0122231 Rosa chinensis HOM05D002182 ORTHO05D004671 2.9e-61 239.2 137 81.8
MD15G1134700 Malus domestica HOM05D002182 ORTHO05D004671 5.0e-61 238.4 143 77.6
VMungo1309G0220 Vigna mungo HOM05D002182 ORTHO05D004671 5.0e-61 238.4 145 76.6
Lj1g0008046 Lotus japonicus HOM05D002182 ORTHO05D004671 6.5e-61 238.0 137 80.3
Hund21801 Selenicereus undatus HOM05D002182 ORTHO05D004671 1.4e-60 236.9 145 73.8
PGR102G1182 Punica granatum HOM05D002182 ORTHO05D004671 1.9e-60 236.5 137 81.0
Glyma.06G155600 Glycine max HOM05D002182 ORTHO05D004671 2.5e-60 236.1 138 78.3
Nn5g28440 Nelumbo nucifera HOM05D002182 ORTHO05D004671 2.5e-60 236.1 145 75.2
Psat5g060640 Pisum sativum HOM05D002182 ORTHO05D004671 4.2e-60 235.3 135 80.0
TAR376G0522 Trochodendron aralioides HOM05D002182 ORTHO05D004671 4.2e-60 235.3 145 76.6
Ah.06g191020 Amaranthus hybridus HOM05D002182 ORTHO05D004671 5.5e-60 235.0 145 76.6
AUR62006857 Chenopodium quinoa HOM05D002182 ORTHO05D004671 5.5e-60 235.0 137 79.6
TPR.G33581 Trifolium pratense HOM05D002182 ORTHO05D004671 5.5e-60 235.0 135 80.0
MBI07_g47060_MAGBIO Magnolia biondii HOM05D002182 ORTHO05D004671 7.2e-60 234.6 137 79.6
unitig_62.g23374 Utricularia gibba HOM05D002182 ORTHO05D004671 7.2e-60 234.6 143 74.1
AUR62000512 Chenopodium quinoa HOM05D002182 ORTHO05D004671 9.3e-60 234.2 135 79.3
Gohir.D11G061900 Gossypium hirsutum HOM05D002182 ORTHO05D004671 2.1e-59 233.0 143 76.2
PSO384G2582 Papaver somniferum HOM05D002182 ORTHO05D004671 2.1e-59 233.0 137 77.4
Gorai.007G066700 Gossypium raimondii HOM05D002182 ORTHO05D004671 3.5e-59 232.3 143 76.2
Duzib264G0915 Durio zibethinus HOM05D002182 ORTHO05D004671 4.6e-59 231.9 143 75.5
MELO3C009682.2 Cucumis melo HOM05D002182 ORTHO05D004671 7.9e-59 231.1 137 78.1
Sed0010212 Sechium edule HOM05D002182 ORTHO05D004671 7.9e-59 231.1 137 78.8
Cpa.g.sc37.4 Carica papaya HOM05D002182 ORTHO05D004671 1.3e-58 230.3 136 77.9
Lsat_1_v5_gn_1_78841 Lactuca sativa HOM05D002182 ORTHO05D004671 2.3e-58 229.6 145 71.7
Manes.13G078050 Manihot esculenta HOM05D002182 ORTHO05D004671 2.3e-58 229.6 145 74.5
QL10p041326 Quercus lobata HOM05D002182 ORTHO05D004671 2.3e-58 229.6 137 78.8
PSO443G0075 Papaver somniferum HOM05D002182 ORTHO05D004671 3.9e-58 228.8 137 76.6
CsaV3_3G039390 Cucumis sativus L. HOM05D002182 ORTHO05D004671 6.7e-58 228.0 137 77.4
Thecc.01G137400 Theobroma cacao HOM05D002182 ORTHO05D004671 6.7e-58 228.0 143 74.8
THA.LOC104818422 Tarenaya hassleriana HOM05D002182 ORTHO05D004671 1.1e-57 227.3 145 73.8
BcaC03g18232 Brassica carinata HOM05D002182 ORTHO05D004671 1.9e-57 226.5 135 76.3
Cfa002178 Carpinus fangiana HOM05D002182 ORTHO05D004671 1.9e-57 226.5 127 82.7
Gohir.A11G057700 Gossypium hirsutum HOM05D002182 ORTHO05D004671 2.5e-57 226.1 143 74.8
AT5G63920 Arabidopsis thaliana HOM05D002182 ORTHO05D004671 3.3e-57 225.7 135 76.3
Ciclev10003112m.g Citrus clementina HOM05D002182 ORTHO05D004671 3.3e-57 225.7 137 77.4
ATR1001G007 Amborella trichopoda HOM05D002182 ORTHO05D004671 5.7e-57 224.9 129 79.8
Carub.0008s2470 Capsella rubella HOM05D002182 ORTHO05D004671 1.3e-56 223.8 145 71.7
Medtr3g096640 Medicago truncatula HOM05D002182 ORTHO05D004671 1.3e-56 223.8 135 74.1
Aqoxy5G02289 Aquilegia oxysepala HOM05D002182 ORTHO05D004671 1.6e-56 223.4 137 75.2
BcaB07g29709 Brassica carinata HOM05D002182 ORTHO05D004671 1.6e-56 223.4 135 75.6
A02p43050 Brassica napus HOM05D002182 ORTHO05D004671 1.6e-56 223.4 135 75.6
C02p63010 Brassica napus HOM05D002182 ORTHO05D004671 1.6e-56 223.4 135 75.6
BolC2t12375H Brassica oleracea HOM05D002182 ORTHO05D004671 1.6e-56 223.4 135 75.6
BraA02t09226Z Brassica rapa HOM05D002182 ORTHO05D004671 1.6e-56 223.4 135 75.6
CiPaw.04G079900 Carya illinoinensis HOM05D002182 ORTHO05D004671 1.6e-56 223.4 137 75.9
Aa31LG1G17970 Aethionema arabicum HOM05D002182 ORTHO05D004671 2.2e-56 223.0 135 74.8
TWI79G1433 Tripterygium wilfordii HOM05D002182 ORTHO05D004671 2.2e-56 223.0 137 75.9
CARHR277840 Cardamine hirsuta HOM05D002182 ORTHO05D004671 2.8e-56 222.6 145 71.0
Cc07_g19240 Coffea canephora HOM05D002182 ORTHO05D004671 3.7e-56 222.2 139 73.4
COL.COLO4_35815 Corchorus olitorius HOM05D002182 ORTHO05D004671 3.7e-56 222.2 143 74.8
AL8G41160 Arabidopsis lyrata HOM05D002182 ORTHO05D004671 8.2e-56 221.1 137 75.2
Sp2g26990 Schrenkiella parvula HOM05D002182 ORTHO05D004671 1.1e-55 220.7 135 74.1
Zm00001eb005010 Zea mays HOM05D002182 ORTHO05D004671 1.1e-55 220.7 137 73.7
Thhalv10003618m.g Eutrema salsugineum HOM05D002182 ORTHO05D004671 1.4e-55 220.3 135 74.1
Os03g0165000 Oryza sativa ssp. japonica HOM05D002182 ORTHO05D004671 1.8e-55 219.9 138 71.7
Sc16g0009510 Simmondsia chinensis HOM05D002182 ORTHO05D004671 2.4e-55 219.5 137 73.0
ECA248G2894 Erigeron canadensis HOM05D002182 ORTHO05D004671 1.2e-54 217.2 139 71.9
Sabra05G0055200 Salix brachista HOM05D002182 ORTHO05D004671 2.0e-54 216.5 176 62.5
HPP92_005922 Vanilla planifolia HOM05D002182 ORTHO05D004671 1.0e-53 214.2 139 71.2
Rhsim10G0124200 Rhododendron simsii HOM05D002182 ORTHO05D004671 2.5e-49 199.5 107 86.0
Atru.chr4.980 Acer truncatum HOM05D002182 ORTHO05D004671 9.7e-49 197.6 145 66.9
Mapoly0113s0011 Marchantia polymorpha HOM05D002182 ORTHO05D004671 9.7e-49 197.6 139 64.7
Pp3c21_9710 Physcomitrium patens HOM05D002182 ORTHO05D004671 4.8e-48 195.3 129 67.4
SMO114G0082 Selaginella moellendorffii HOM05D002182 ORTHO05D004671 2.0e-46 189.9 129 64.3
CANSAT01G2275 Cannabis sativa HOM05D002182 ORTHO05D004671 2.2e-45 186.4 102 84.3
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 1.1e-44 184.1 106 80.2
DCAR_023889 Daucus carota HOM05D002182 ORTHO05D004671 2.5e-44 183.0 110 76.4
AagrBONN_evm.TU.Sc2ySwM_228.5819 Anthoceros agrestis HOM05D002182 ORTHO05D004671 7.2e-44 181.4 127 63.8
CSS0041549 Camellia sinensis var. sinensis HOM05D002182 ORTHO05D004671 9.4e-44 181.0 103 82.5
SEGI_15758 Sequoiadendron giganteum HOM05D002182 ORTHO05D004671 1.4e-39 167.2 103 70.9
CBR_g74987 Chara braunii HOM05D002182 ORTHO05D004671 1.1e-36 157.5 105 67.6
ClCG10G017010 Citrullus lanatus HOM05D002182 ORTHO05D004671 7.0e-31 138.3 130 53.8
Medtr5g061930 Medicago truncatula HOM05D002182 ORTHO05D004671 4.7e-27 125.6 145 44.1
Haze_26976 Corylus avellana HOM05D002182 ORTHO05D004671 1.4e-26 124.0 146 44.5
SGA_v2.0_scaffold54G19590 Striga asiatica HOM05D002182 ORTHO05D004671 8.8e-26 121.3 77 75.3
CSS0026830 Camellia sinensis var. sinensis HOM05D002182 ORTHO05D004671 2.6e-25 119.8 65 78.5
MCO11G433 Micromonas commoda HOM05D002182 ORTHO05D004671 1.4e-23 114.0 154 41.6
CDE09G0651 Ceratophyllum demersum HOM05D002182 ORTHO05D004671 9.1e-23 111.3 64 71.9
PRCOL_00003192 Prasinoderma coloniale HOM05D002182 ORTHO05D004671 2.7e-22 109.8 151 39.7
Haze_25331 Corylus avellana HOM05D002182 ORTHO05D004671 2.2e-21 106.7 59 78.0
Cfa022087 Carpinus fangiana HOM05D002182 ORTHO05D004671 5.0e-21 105.5 133 41.4
PSO782G2357 Papaver somniferum HOM05D002182 ORTHO05D004671 5.4e-15 85.5 138 34.8
PSO170G3411 Papaver somniferum HOM05D002182 ORTHO05D004671 4.3e-12 75.9 109 38.5
FAN12G0184 Fragaria x ananassa HOM05D002182 ORTHO05D008382 1.2e-11 74.3 124 35.5
FAN22G0833 Fragaria x ananassa HOM05D002182 ORTHO05D008382 1.2e-11 74.3 124 35.5
FvH4_4g12750 Fragaria vesca HOM05D002182 ORTHO05D008382 1.6e-11 73.9 124 35.5
RcHm_v2.0_Chr4g0412031 Rosa chinensis HOM05D002182 ORTHO05D008382 8.0e-11 71.6 124 34.7
RcHm_v2.0_Chr2g0108981 Rosa chinensis HOM05D002182 ORTHO05D008382 1.0e-10 71.2 124 35.5
Sc19g0007480 Simmondsia chinensis HOM05D002182 ORTHO05D008382 1.0e-10 71.2 131 29.8
Prupe.1G173400 Prunus persica HOM05D002182 ORTHO05D008382 6.8e-10 68.6 124 33.9
Carub.0004s1334 Capsella rubella HOM05D002182 ORTHO05D008382 1.5e-09 67.4 127 31.5
AL4G27360 Arabidopsis lyrata HOM05D002182 ORTHO05D008382 2.6e-09 66.6 127 31.5
AT2G32000 Arabidopsis thaliana HOM05D002182 ORTHO05D008382 3.4e-09 66.2 127 32.3
Thhalv10016222m.g Eutrema salsugineum HOM05D002182 ORTHO05D008382 4.4e-09 65.9 127 30.7
EL10Ac3g07419 Beta vulgaris HOM05D002182 ORTHO05D008382 9.8e-09 64.7 128 28.9
Aa31LG5G5010 Aethionema arabicum HOM05D002182 ORTHO05D008382 1.3e-08 64.3 127 29.9
Hund19029 Selenicereus undatus HOM05D002182 ORTHO05D008382 2.9e-08 63.2 129 28.7
HanXRQChr14g0436751 Helianthus annuus HOM05D002182 ORTHO05D008382 3.7e-08 62.8 122 30.3
MCO11G923 Micromonas commoda HOM05D002182 ORTHO05D008382 6.4e-08 62.0 110 30.9
Cpa.g.sc157.4 Carica papaya HOM05D002182 ORTHO05D008382 1.1e-07 61.2 130 29.2
Manes.01G002901 Manihot esculenta HOM05D002182 ORTHO05D008382 1.4e-07 60.8 130 27.7
DCAR_024119 Daucus carota HOM05D002182 ORTHO05D008382 2.7e-06 56.6 113 33.6
MBI07_g47157_MAGBIO Magnolia biondii HOM05D002182 ORTHO05D004671 3.5e-06 56.2 32 84.4
SEGI_13382 Sequoiadendron giganteum HOM05D002182 ORTHO05D008382 5.9e-06 55.5 121 26.4


User provided reference genes

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