Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001277g0010 Nicotiana tabacum HOM05D002182 ORTHO05D004671 1.2e-146 523.1 254 100.0
Sopen05g009910 Solanum pennellii HOM05D002182 ORTHO05D004671 1.7e-108 396.4 250 80.4
CAN.G163.2 Capsicum annuum HOM05D002182 ORTHO05D004671 2.5e-107 392.5 245 80.0
Cc07_g19240 Coffea canephora HOM05D002182 ORTHO05D004671 6.1e-90 334.7 249 66.3
Dinv35485 Davidia involucrata HOM05D002182 ORTHO05D004671 9.7e-88 327.4 255 64.3
GSVIVG01026461001 Vitis vinifera HOM05D002182 ORTHO05D004671 2.1e-82 309.7 258 60.9
Gohir.A11G057700 Gossypium hirsutum HOM05D002182 ORTHO05D004671 2.7e-82 309.3 252 59.9
Thecc.01G137400 Theobroma cacao HOM05D002182 ORTHO05D004671 2.7e-82 309.3 257 61.9
Gohir.D11G061900 Gossypium hirsutum HOM05D002182 ORTHO05D004671 8.0e-82 307.8 252 59.9
Actinidia20028 Actinidia chinensis HOM05D002182 ORTHO05D004671 1.4e-81 307.0 259 60.6
Prupe.4G275500 Prunus persica HOM05D002182 ORTHO05D004671 8.8e-81 304.3 257 59.9
Cfa002178 Carpinus fangiana HOM05D002182 ORTHO05D004671 2.0e-80 303.1 258 58.9
Duzib264G0915 Durio zibethinus HOM05D002182 ORTHO05D004671 2.0e-80 303.1 255 60.0
vmacro12745 Vaccinium macrocarpon HOM05D002182 ORTHO05D004671 1.3e-79 300.4 255 60.0
RcHm_v2.0_Chr2g0122231 Rosa chinensis HOM05D002182 ORTHO05D004671 1.7e-79 300.1 249 59.8
CANSAT01G2275 Cannabis sativa HOM05D002182 ORTHO05D004671 2.8e-79 299.3 254 61.4
Gorai.007G066700 Gossypium raimondii HOM05D002182 ORTHO05D004671 3.7e-79 298.9 271 56.1
TWI79G1433 Tripterygium wilfordii HOM05D002182 ORTHO05D004671 1.1e-78 297.4 252 58.7
Sc16g0009510 Simmondsia chinensis HOM05D002182 ORTHO05D004671 2.4e-78 296.2 253 59.3
Potri.005G067100 Populus trichocarpa HOM05D002182 ORTHO05D004671 4.1e-78 295.4 264 58.0
Lalb_Chr11g0068591 Lupinus albus HOM05D002182 ORTHO05D004671 1.2e-77 293.9 263 59.3
Rhsim10G0124100 Rhododendron simsii HOM05D002182 ORTHO05D004671 1.2e-77 293.9 248 59.7
MD15G1134700 Malus domestica HOM05D002182 ORTHO05D004671 1.6e-77 293.5 305 52.8
COL.COLO4_35815 Corchorus olitorius HOM05D002182 ORTHO05D004671 2.0e-77 293.1 258 57.4
Eucgr.H05141 Eucalyptus grandis HOM05D002182 ORTHO05D004671 2.0e-77 293.1 252 60.3
FvH4_1g24710 Fragaria vesca HOM05D002182 ORTHO05D004671 2.7e-77 292.7 259 58.3
EL10Ac4g09621 Beta vulgaris HOM05D002182 ORTHO05D004671 3.5e-77 292.4 254 58.7
Atru.chr4.980 Acer truncatum HOM05D002182 ORTHO05D004671 4.5e-77 292.0 251 58.6
Ca_16979_v3 Cicer arietinum L. HOM05D002182 ORTHO05D004671 5.9e-77 291.6 261 57.9
CiPaw.04G079900 Carya illinoinensis HOM05D002182 ORTHO05D004671 2.9e-76 289.3 261 55.9
Migut.H00803 Erythranthe guttata HOM05D002182 ORTHO05D004671 6.5e-76 288.1 251 58.6
Aqoxy5G02289 Aquilegia oxysepala HOM05D002182 ORTHO05D004671 1.5e-75 287.0 267 56.6
Lj1g0008046 Lotus japonicus HOM05D002182 ORTHO05D004671 1.6e-74 283.5 257 55.6
TAR376G0522 Trochodendron aralioides HOM05D002182 ORTHO05D004671 2.7e-74 282.7 257 56.0
Nn5g28440 Nelumbo nucifera HOM05D002182 ORTHO05D004671 6.1e-74 281.6 258 55.8
CsaV3_3G039390 Cucumis sativus L. HOM05D002182 ORTHO05D004671 3.0e-73 279.3 272 54.4
MELO3C009682.2 Cucumis melo HOM05D002182 ORTHO05D004671 5.2e-73 278.5 270 54.4
arahy.Tifrunner.gnm1.ann1.XVSB6Y Arachis hypogaea HOM05D002182 ORTHO05D004671 6.8e-73 278.1 261 55.2
PGR102G1182 Punica granatum HOM05D002182 ORTHO05D004671 6.8e-73 278.1 246 57.7
arahy.Tifrunner.gnm1.ann1.K5KUZ3 Arachis hypogaea HOM05D002182 ORTHO05D004671 2.0e-72 276.6 255 56.1
Ah.06g191020 Amaranthus hybridus HOM05D002182 ORTHO05D004671 7.5e-72 274.6 266 54.1
TPR.G33581 Trifolium pratense HOM05D002182 ORTHO05D004671 7.5e-72 274.6 268 53.4
VMungo1309G0220 Vigna mungo HOM05D002182 ORTHO05D004671 2.2e-71 273.1 255 57.3
Glyma.06G155600 Glycine max HOM05D002182 ORTHO05D004671 4.8e-71 271.9 255 56.1
Sed0010212 Sechium edule HOM05D002182 ORTHO05D004671 6.3e-71 271.6 255 56.1
Sabra05G0055200 Salix brachista HOM05D002182 ORTHO05D004671 8.3e-71 271.2 310 48.7
Hund21801 Selenicereus undatus HOM05D002182 ORTHO05D004671 8.3e-71 271.2 269 52.4
CSS0041549 Camellia sinensis var. sinensis HOM05D002182 ORTHO05D004671 1.4e-70 270.4 251 57.4
Manes.13G078050 Manihot esculenta HOM05D002182 ORTHO05D004671 1.4e-70 270.4 249 55.0
Phvul.009G154850 Phaseolus vulgaris HOM05D002182 ORTHO05D004671 1.8e-70 270.0 269 54.6
ClCG10G017010 Citrullus lanatus HOM05D002182 ORTHO05D004671 2.4e-70 269.6 258 56.6
Ah.06g191010 Amaranthus hybridus HOM05D002617 ORTHO05D009035 1.3e-68 263.8 260 53.8
ATR1001G007 Amborella trichopoda HOM05D002182 ORTHO05D004671 1.5e-67 260.4 253 53.8
HanXRQChr01g0016921 Helianthus annuus HOM05D002182 ORTHO05D004671 8.8e-65 251.1 254 51.6
Medtr3g096640 Medicago truncatula HOM05D002182 ORTHO05D004671 2.0e-64 250.0 293 46.8
PSO443G0075 Papaver somniferum HOM05D002182 ORTHO05D004671 2.6e-64 249.6 277 51.3
Aa31LG1G17970 Aethionema arabicum HOM05D002182 ORTHO05D004671 5.7e-64 248.4 249 51.4
Solyc05g014720.4 Solanum lycopersicum HOM05D002182 ORTHO05D004671 9.8e-64 247.7 169 78.7
Thhalv10003618m.g Eutrema salsugineum HOM05D002182 ORTHO05D004671 1.3e-63 247.3 260 48.5
Sp2g26990 Schrenkiella parvula HOM05D002182 ORTHO05D004671 1.3e-63 247.3 259 49.0
PSO384G2582 Papaver somniferum HOM05D002182 ORTHO05D004671 1.7e-63 246.9 276 51.1
HPP92_005917 Vanilla planifolia HOM05D002182 ORTHO05D004671 2.8e-63 246.1 257 51.4
AT5G63920 Arabidopsis thaliana HOM05D002182 ORTHO05D004671 6.3e-63 245.0 254 48.0
Carub.0008s2470 Capsella rubella HOM05D002182 ORTHO05D004671 8.3e-63 244.6 254 49.2
THA.LOC104818422 Tarenaya hassleriana HOM05D002182 ORTHO05D004671 8.3e-63 244.6 246 49.6
ECA248G2894 Erigeron canadensis HOM05D002182 ORTHO05D004671 2.4e-62 243.0 272 45.6
A02p43050 Brassica napus HOM05D002182 ORTHO05D004671 3.1e-62 242.7 256 48.4
AL8G41160 Arabidopsis lyrata HOM05D002182 ORTHO05D004671 4.1e-62 242.3 251 48.6
BraA02t09226Z Brassica rapa HOM05D002182 ORTHO05D004671 5.4e-62 241.9 256 48.4
Psat5g060640 Pisum sativum HOM05D002182 ORTHO05D004671 7.0e-62 241.5 262 49.2
BcaB07g29709 Brassica carinata HOM05D002182 ORTHO05D004671 9.2e-62 241.1 257 47.5
BcaC03g18232 Brassica carinata HOM05D002182 ORTHO05D004671 1.6e-61 240.4 256 48.4
SGA_v2.0_scaffold54G19590 Striga asiatica HOM05D002182 ORTHO05D004671 5.0e-52 208.8 260 47.3
Lj4C830T7 Lonicera japonica HOM05D002182 ORTHO05D004671 1.1e-51 207.6 183 60.7
Oeu050090.2 Olea europaea HOM05D002182 ORTHO05D004671 1.1e-51 207.6 170 64.7
FAN23G2071 Fragaria x ananassa HOM05D002182 ORTHO05D004671 4.7e-50 202.2 170 60.0
Zm00001eb005010 Zea mays HOM05D002182 ORTHO05D004671 8.0e-50 201.4 255 46.7
Os03g0165000 Oryza sativa ssp. japonica HOM05D002182 ORTHO05D004671 1.2e-48 197.6 274 41.6
MBI07_g43314_MAGBIO Magnolia biondii HOM05D002182 ORTHO05D004671 1.7e-47 193.7 254 43.7
Pp3c21_9710 Physcomitrium patens HOM05D002182 ORTHO05D004671 4.1e-46 189.1 313 38.7
Mapoly0113s0011 Marchantia polymorpha HOM05D002182 ORTHO05D004671 2.7e-45 186.4 288 37.2
C02p63020 Brassica napus HOM05D002182 ORTHO05D017531 1.4e-41 174.1 208 47.1
AUR62000512 Chenopodium quinoa HOM05D002182 ORTHO05D004671 6.8e-41 171.8 245 44.9
Ciclev10003112m.g Citrus clementina HOM05D002182 ORTHO05D004671 3.5e-37 159.5 139 57.6
AagrBONN_evm.TU.Sc2ySwM_228.5819 Anthoceros agrestis HOM05D002182 ORTHO05D004671 1.7e-36 157.1 186 45.7
AUR62006857 Chenopodium quinoa HOM05D002182 ORTHO05D004671 1.9e-35 153.7 287 38.3
Haze_25328 Corylus avellana HOM05D002182 ORTHO05D017531 5.6e-35 152.1 132 58.3
Lsat_1_v5_gn_1_78841 Lactuca sativa HOM05D002182 ORTHO05D004671 3.6e-34 149.4 175 42.3
CSS0000135 Camellia sinensis var. sinensis HOM05D002182 ORTHO05D017531 1.3e-31 141.0 116 60.3
unitig_62.g23375 Utricularia gibba HOM05D002182 ORTHO05D004671 1.1e-30 137.9 193 45.1
CSS0039016 Camellia sinensis var. sinensis HOM05D002182 ORTHO05D004671 1.6e-29 134.0 81 70.4
FAN26G3457 Fragaria x ananassa HOM05D002182 ORTHO05D004671 1.2e-26 124.4 107 60.7
CDE09G0036 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 5.8e-24 115.5 124 53.2
SMO114G0082 Selaginella moellendorffii HOM05D002182 ORTHO05D004671 4.3e-19 99.4 69 58.0
FAN26G1134 Fragaria x ananassa HOM05D002182 ORTHO05D004671 3.1e-17 93.2 92 54.3
FAN19G2097 Fragaria x ananassa HOM05D002182 ORTHO05D004671 9.0e-17 91.7 242 30.2
SEGI_40414 Sequoiadendron giganteum HOM05D002182 ORTHO05D004671 5.4e-14 82.4 57 57.9
DCAR_023889 Daucus carota HOM05D002182 ORTHO05D004671 2.7e-13 80.1 49 65.3
SEGI_24428 Sequoiadendron giganteum HOM05D002182 ORTHO05D017531 1.0e-12 78.2 202 34.2
SHI36070 Sapria himalayana HOM05D002182 ORTHO05D004671 6.7e-12 75.5 61 57.4
Cpa.g.c33573 Carica papaya HOM05D002182 ORTHO05D017531 8.1e-10 68.6 77 51.9
BolC3t18503H Brassica oleracea HOM05D002182 ORTHO05D017531 1.2e-08 64.7 69 52.2
ClCG07G010840 Citrullus lanatus HOM05D008124 ORTHO05D004072 4.9e-07 59.3 200 30.0
EL10Ac9g22884 Beta vulgaris HOM05D008124 ORTHO05D004072 5.5e-06 55.8 119 36.1
PRCOL_00006794 Prasinoderma coloniale HOM05D008124 ORTHO05D004072 9.3e-06 55.1 109 32.1


User provided reference genes

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