Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001131g0070 Nicotiana tabacum HOM05D000246 ORTHO05D007958 2.0e-78 295.8 160 100.0
Nitab4.5_0000907g0030 Nicotiana tabacum HOM05D000246 ORTHO05D007958 2.4e-68 262.3 150 95.3
Peaxi162Scf00445g00914 Petunia axillaris HOM05D000246 ORTHO05D007958 1.3e-61 240.0 150 86.7
CAN.G195.30 Capsicum annuum HOM05D000246 ORTHO05D007958 4.9e-61 238.0 150 87.3
Sopen08g023200 Solanum pennellii HOM05D000246 ORTHO05D007958 8.3e-61 237.3 150 84.7
Solyc08g074600.4 Solanum lycopersicum HOM05D000246 ORTHO05D007958 4.3e-57 224.9 152 82.9
Dinv09439 Davidia involucrata HOM05D000246 ORTHO05D007958 2.2e-45 186.0 151 65.6
arahy.Tifrunner.gnm1.ann1.4RSR2I Arachis hypogaea HOM05D000246 ORTHO05D007958 5.4e-44 181.4 150 64.0
arahy.Tifrunner.gnm1.ann1.QS0FC1 Arachis hypogaea HOM05D000246 ORTHO05D007958 5.4e-44 181.4 150 64.0
CSS0002005 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007958 5.4e-44 181.4 151 63.6
CSS0007497 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007958 5.4e-44 181.4 151 63.6
Cc00_g05210 Coffea canephora HOM05D000246 ORTHO05D007958 5.4e-44 181.4 150 65.3
PGR042G2144 Punica granatum HOM05D000246 ORTHO05D007958 5.4e-44 181.4 153 62.7
Aqoxy3G01991 Aquilegia oxysepala HOM05D000246 ORTHO05D007958 1.2e-43 180.3 153 62.1
Actinidia03316 Actinidia chinensis HOM05D000246 ORTHO05D007958 6.0e-43 177.9 151 61.6
Eucgr.E01207 Eucalyptus grandis HOM05D000246 ORTHO05D007958 1.7e-42 176.4 153 62.7
ECA240G3403 Erigeron canadensis HOM05D000246 ORTHO05D007958 2.3e-42 176.0 150 63.3
CSS0020800 Camellia sinensis var. sinensis HOM05D005482 ORTHO05D006502 3.9e-42 175.3 156 60.3
Ca_25083_v3 Cicer arietinum L. HOM05D000246 ORTHO05D007958 3.9e-42 175.3 149 62.4
Potri.003G104300 Populus trichocarpa HOM05D000246 ORTHO05D007958 3.9e-42 175.3 151 63.6
Migut.A00506 Erythranthe guttata HOM05D000246 ORTHO05D007958 5.1e-42 174.9 150 60.0
FvH4_5g24180 Fragaria vesca HOM05D000246 ORTHO05D007958 8.7e-42 174.1 150 63.3
DCAR_004546 Daucus carota HOM05D000246 ORTHO05D007958 1.1e-41 173.7 152 63.2
TAR629G0378 Trochodendron aralioides HOM05D000246 ORTHO05D007958 1.1e-41 173.7 151 64.2
RcHm_v2.0_Chr7g0213961 Rosa chinensis HOM05D000246 ORTHO05D007958 1.9e-41 172.9 151 62.9
MSTRG.11835 Avicennia marina HOM05D000246 ORTHO05D007958 2.5e-41 172.6 150 60.0
TPR.G17252 Trifolium pratense HOM05D000246 ORTHO05D007958 2.5e-41 172.6 150 61.3
Sed0002229 Sechium edule HOM05D000246 ORTHO05D007958 3.3e-41 172.2 152 60.5
Medtr5g026590 Medicago truncatula HOM05D000246 ORTHO05D007958 7.3e-41 171.0 150 61.3
TWI56G1093 Tripterygium wilfordii HOM05D000246 ORTHO05D007958 7.3e-41 171.0 150 61.3
MD00G1078900 Malus domestica HOM05D000246 ORTHO05D007958 9.6e-41 170.6 148 60.1
GSVIVG01036944001 Vitis vinifera HOM05D000246 ORTHO05D007958 1.2e-40 170.2 150 62.7
HanXRQChr03g0082361 Helianthus annuus HOM05D000246 ORTHO05D007958 2.8e-40 169.1 150 63.3
Prupe.5G018600 Prunus persica HOM05D000246 ORTHO05D007958 3.6e-40 168.7 148 60.1
Ciclev10002300m.g Citrus clementina HOM05D000246 ORTHO05D007958 4.7e-40 168.3 151 59.6
Atru.chr6.2110 Acer truncatum HOM05D000246 ORTHO05D007958 6.2e-40 167.9 151 59.6
EL10Ac5g11897 Beta vulgaris HOM05D000246 ORTHO05D007958 6.2e-40 167.9 150 58.7
CsaV3_3G030270 Cucumis sativus L. HOM05D000246 ORTHO05D007958 6.2e-40 167.9 152 59.2
Lsat_1_v5_gn_5_59341 Lactuca sativa HOM05D000246 ORTHO05D007958 6.2e-40 167.9 151 62.9
Lalb_Chr16g0380641 Lupinus albus HOM05D000246 ORTHO05D007958 1.1e-39 167.2 150 60.0
Lj2g0022743 Lotus japonicus HOM05D000246 ORTHO05D007958 1.8e-39 166.4 153 58.8
Cfa012648 Carpinus fangiana HOM05D000246 ORTHO05D007958 5.3e-39 164.9 150 58.7
ATR0829G216 Amborella trichopoda HOM05D000246 ORTHO05D007958 9.0e-39 164.1 156 54.5
AUR62007433 Chenopodium quinoa HOM05D000246 ORTHO05D007958 9.0e-39 164.1 150 60.0
AUR62027305 Chenopodium quinoa HOM05D000246 ORTHO05D007958 1.2e-38 163.7 150 58.7
Nn1g09149 Nelumbo nucifera HOM05D000246 ORTHO05D007958 1.5e-38 163.3 151 59.6
Sc23g0003460 Simmondsia chinensis HOM05D000246 ORTHO05D007958 3.4e-38 162.2 152 57.2
Thecc.03G325100 Theobroma cacao HOM05D000246 ORTHO05D007958 4.4e-38 161.8 150 61.3
SGA_v2.0_scaffold27G11715 Striga asiatica HOM05D000246 ORTHO05D007958 5.8e-38 161.4 160 58.1
Glyma.09G215200 Glycine max HOM05D000246 ORTHO05D007958 7.6e-38 161.0 151 58.9
THA.LOC104814374 Tarenaya hassleriana HOM05D000246 ORTHO05D007958 1.7e-37 159.8 152 54.6
VMungo1215G2022 Vigna mungo HOM05D000246 ORTHO05D007958 3.8e-37 158.7 152 58.6
Gohir.A08G228200 Gossypium hirsutum HOM05D000246 ORTHO05D007958 6.4e-37 157.9 150 58.7
Ah.02g117420 Amaranthus hybridus HOM05D000246 ORTHO05D007958 8.4e-37 157.5 150 56.7
Manes.17G008200 Manihot esculenta HOM05D000246 ORTHO05D007958 8.4e-37 157.5 149 56.4
ClCG07G002430 Citrullus lanatus HOM05D000246 ORTHO05D007958 5.4e-36 154.8 133 63.9
PSO063G2533 Papaver somniferum HOM05D000246 ORTHO05D007958 5.4e-36 154.8 153 54.9
Gohir.D08G248500 Gossypium hirsutum HOM05D000246 ORTHO05D007958 7.1e-36 154.5 150 56.7
BcaB04g18157 Brassica carinata HOM05D000246 ORTHO05D007958 9.3e-36 154.1 152 53.9
FAN18G0721 Fragaria x ananassa HOM05D000246 ORTHO05D007958 1.2e-35 153.7 188 49.5
Gorai.004G265100 Gossypium raimondii HOM05D000246 ORTHO05D007958 1.2e-35 153.7 150 56.7
A08p10580 Brassica napus HOM05D000246 ORTHO05D007958 1.6e-35 153.3 152 54.6
BraA08t33056Z Brassica rapa HOM05D000246 ORTHO05D007958 1.6e-35 153.3 152 54.6
COL.COLO4_35077 Corchorus olitorius HOM05D000246 ORTHO05D007958 2.1e-35 152.9 164 53.7
Thhalv10006954m.g Eutrema salsugineum HOM05D000246 ORTHO05D007958 2.7e-35 152.5 153 54.9
BcaC07g37758 Brassica carinata HOM05D000246 ORTHO05D007958 3.5e-35 152.1 152 54.6
BolC8t48143H Brassica oleracea HOM05D000246 ORTHO05D007958 3.5e-35 152.1 152 54.6
FAN13G2839 Fragaria x ananassa HOM05D000246 ORTHO05D007958 3.5e-35 152.1 188 48.9
HPP92_003405 Vanilla planifolia HOM05D000246 ORTHO05D007958 7.8e-35 151.0 157 54.1
AL1G49670 Arabidopsis lyrata HOM05D000246 ORTHO05D007958 2.3e-34 149.4 153 55.6
Sp1g27200 Schrenkiella parvula HOM05D000246 ORTHO05D007958 2.3e-34 149.4 152 52.6
Carub.0001s2981 Capsella rubella HOM05D000246 ORTHO05D007958 8.7e-34 147.5 151 55.0
AT1G31360 Arabidopsis thaliana HOM05D000246 ORTHO05D007958 1.9e-33 146.4 153 54.9
MBI04_g30770_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D007958 9.6e-33 144.1 160 53.1
Phvul.002G126800 Phaseolus vulgaris HOM05D000246 ORTHO05D007958 4.8e-32 141.7 130 59.2
Aa31LG2G14550 Aethionema arabicum HOM05D000246 ORTHO05D007958 5.3e-31 138.3 170 45.9
Hund14322 Selenicereus undatus HOM05D000246 ORTHO05D007958 6.9e-31 137.9 131 55.7
Duzib205G1660 Durio zibethinus HOM05D000246 ORTHO05D007958 9.0e-31 137.5 182 49.5
Psat2g143080 Pisum sativum HOM05D000246 ORTHO05D007958 2.6e-30 136.0 114 62.3
Zm00001eb026880 Zea mays HOM05D000246 ORTHO05D007958 3.8e-29 132.1 156 49.4
MELO3C022742.2 Cucumis melo HOM05D000246 ORTHO05D007958 6.4e-29 131.3 112 65.2
SEGI_13716 Sequoiadendron giganteum HOM05D000246 ORTHO05D007958 7.1e-28 127.9 163 44.8
CANSAT35G0103 Cannabis sativa HOM05D000246 ORTHO05D007958 3.1e-23 112.5 93 62.4
Pp3c5_19440 Physcomitrium patens HOM05D000246 ORTHO05D007958 4.5e-22 108.6 164 40.9
CiPaw.11G104300 Carya illinoinensis HOM05D000246 ORTHO05D007958 7.6e-22 107.8 76 72.4
AagrBONN_evm.TU.Sc2ySwM_344.815 Anthoceros agrestis HOM05D000246 ORTHO05D007958 1.4e-20 103.6 162 40.1
AagrBONN_evm.TU.Sc2ySwM_228.4542 Anthoceros agrestis HOM05D000246 ORTHO05D007958 2.5e-20 102.8 162 38.9
CDE04G3137 Ceratophyllum demersum HOM05D000246 ORTHO05D007958 1.6e-19 100.1 86 60.5
CBR_g2960 Chara braunii HOM05D000246 ORTHO05D007958 1.6e-19 100.1 163 37.4
SHI03753 Sapria himalayana HOM05D000246 ORTHO05D007958 4.6e-19 98.6 136 44.9
FAN08G0258 Fragaria x ananassa HOM05D000246 ORTHO05D007958 6.0e-19 98.2 202 37.6
Mapoly0066s0087 Marchantia polymorpha HOM05D000246 ORTHO05D007958 6.0e-19 98.2 160 38.8
SMO174G0029 Selaginella moellendorffii HOM05D000246 ORTHO05D007958 3.1e-15 85.9 169 35.5
Eucgr.L01604 Eucalyptus grandis HOM05D000246 ORTHO05D007958 9.3e-12 74.3 47 76.6
MBI18_g37582_MAGBIO Magnolia biondii HOM05D000227 ORTHO05D036428 1.0e-10 70.9 78 47.4
Hma1.2p1_1000F.1_g246420 Hydrangea macrophylla HOM05D000246 ORTHO05D036428 3.0e-10 69.3 55 65.5
MBI19_g45573_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D036428 1.1e-09 67.4 77 44.2
HPP92_003426 Vanilla planifolia HOM05D000246 ORTHO05D007958 2.6e-06 56.2 58 53.4
Lsat_1_v5_gn_8_14461 Lactuca sativa HOM05D000246 ORTHO05D026750 1.0e-05 54.3 63 47.6


User provided reference genes

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