Gene: Thecc.03G325100

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.03G325100
  • Transcript Identifier Thecc.03G325100.2
  • Gene Type Coding gene
  • Location Chromosome_3 : 35346755-35364490 : negative

Gene Family Information

  • ID HOM05D000246
  • #Genes/#Species 1713/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.03G325100.v2.1
  • pacid 41999873
  • ancestorIdentifier Thecc1EG016748.CGDv1.1
  • ancestorIdentifier Thecc1EG016748t2.CGDv1.1

Descriptions

  • Description RECQ helicase L2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006260
IEA
InterProDNA replication
GO:0006281
IEA
InterProDNA repair
GO:0006310
IEA
InterProDNA recombination
GO:0032508
ISO
PLAZA Integrative OrthologyDNA duplex unwinding AT1G31360

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043138
IEA
InterPro3'-5' DNA helicase activity
GO:0004386
IEA
InterProhelicase activity
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G31360
GO:0009378
ISO
PLAZA Integrative Orthologyfour-way junction helicase activity AT1G31360

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016592
ISO
PLAZA Integrative Orthologymediator complex AT1G31360

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR018982 RQC domain
IPR001650 Helicase, C-terminal
IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain
IPR004589 DNA helicase, ATP-dependent, RecQ type
IPR011545 DEAD/DEAH box helicase domain
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
15.3.4.4.5.3 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.other components.component MED34