Gene: COL.COLO4_35077

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_35077
  • Transcript Identifier COL.rna33766
  • Gene Type Coding gene
  • Location AWUE01022487.1 : 152026-162865 : negative

Gene Family Information

  • ID HOM05D000246
  • #Genes/#Species 1713/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna33766
  • GenBank OMO57824.1
  • id gene35049
  • gene_name COLO4_35077
  • uniprot A0A1R3GIA0

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0006260
IEA
GOA DatabaseDNA replication
GO:0006260
IEA
InterProDNA replication
GO:0006310
IEA
GOA DatabaseDNA recombination
GO:0006310
IEA
InterProDNA recombination
GO:0044237
IEA
GOA Databasecellular metabolic process
GO:0044237
IEA
InterProcellular metabolic process
GO:0032508
IEA
GOA DatabaseDNA duplex unwinding

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0009378
ISO
PLAZA Integrative Orthologyfour-way junction helicase activity AT1G31360
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G31360
GO:0043138
IEA
GOA Database3'-5' DNA helicase activity
GO:0043138
IEA
InterPro3'-5' DNA helicase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0004386
IEA
InterProhelicase activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003678
IEA
GOA DatabaseDNA helicase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016592
ISO
PLAZA Integrative Orthologymediator complex AT1G31360

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR010997 HRDC-like superfamily
IPR002121 HRDC domain
IPR001650 Helicase, C-terminal
IPR004589 DNA helicase, ATP-dependent, RecQ type
IPR011545 DEAD/DEAH box helicase domain
IPR044876 HRDC domain superfamily
IPR018982 RQC domain
Mapman id Description
35.1 not assigned.annotated