Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000886g0200 Nicotiana tabacum HOM05D001090 ORTHO05D006167 6.4e-134 480.7 236 100.0
Nitab4.5_0001761g0290 Nicotiana tabacum HOM05D001090 ORTHO05D006167 1.8e-43 180.3 143 66.4
Nitab4.5_0005831g0030 Nicotiana tabacum HOM05D001090 ORTHO05D006167 3.0e-43 179.5 343 38.5
Nitab4.5_0010487g0020 Nicotiana tabacum HOM05D001090 ORTHO05D006167 7.7e-39 164.9 141 63.8
Nitab4.5_0002558g0160 Nicotiana tabacum HOM05D001090 ORTHO05D006167 2.6e-34 149.8 125 64.0
Nitab4.5_0001796g0360 Nicotiana tabacum HOM05D001090 ORTHO05D006167 4.3e-29 132.5 121 64.5
Nitab4.5_0000172g1520 Nicotiana tabacum HOM05D001090 ORTHO05D006167 2.1e-28 130.2 69 91.3
Nitab4.5_0001763g0080 Nicotiana tabacum HOM05D001090 ORTHO05D006167 3.7e-25 119.4 82 75.6
Manes.01G235000 Manihot esculenta HOM05D001090 ORTHO05D006167 1.1e-24 117.9 88 67.0
Potri.002G187100 Populus trichocarpa HOM05D001090 ORTHO05D006167 1.4e-24 117.5 88 67.0
Manes.05G009100 Manihot esculenta HOM05D001090 ORTHO05D006167 2.4e-24 116.7 88 67.0
Sabra14G0082800 Salix brachista HOM05D001090 ORTHO05D006167 2.4e-24 116.7 88 67.0
Cpa.g.sc57.13 Carica papaya HOM05D001090 ORTHO05D006167 4.1e-24 115.9 128 51.6
Potri.014G112600 Populus trichocarpa HOM05D001090 ORTHO05D006167 4.1e-24 115.9 88 67.0
TWI23G1021 Tripterygium wilfordii HOM05D001090 ORTHO05D006167 7.0e-24 115.2 88 65.9
TWI59G0772 Tripterygium wilfordii HOM05D001090 ORTHO05D006167 7.0e-24 115.2 88 65.9
RcHm_v2.0_Chr3g0485911 Rosa chinensis HOM05D001090 ORTHO05D006167 1.2e-23 114.4 88 68.2
TPR.G2501 Trifolium pratense HOM05D001090 ORTHO05D006167 1.6e-23 114.0 88 65.9
Gohir.A11G104600 Gossypium hirsutum HOM05D001090 ORTHO05D006167 2.0e-23 113.6 88 65.9
Thecc.01G325100 Theobroma cacao HOM05D001090 ORTHO05D006167 2.0e-23 113.6 88 64.8
Glyma.03G224400 Glycine max HOM05D001090 ORTHO05D006167 2.7e-23 113.2 138 51.4
FAN28G2823 Fragaria x ananassa HOM05D001090 ORTHO05D006167 3.5e-23 112.8 133 51.9
Sabra02G0129700 Salix brachista HOM05D001090 ORTHO05D006167 3.5e-23 112.8 88 65.9
CSS0011193 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D006167 4.6e-23 112.5 88 65.9
CANSAT25G3150 Cannabis sativa HOM05D001090 ORTHO05D006167 4.6e-23 112.5 88 64.8
ClCG11G013170 Citrullus lanatus HOM05D001090 ORTHO05D006167 4.6e-23 112.5 131 52.7
Lalb_Chr04g0260211 Lupinus albus HOM05D001090 ORTHO05D006167 6.0e-23 112.1 136 50.7
Phvul.001G218200 Phaseolus vulgaris HOM05D001090 ORTHO05D006167 6.0e-23 112.1 88 65.9
VMungo1383G1946 Vigna mungo HOM05D001090 ORTHO05D006167 6.0e-23 112.1 88 65.9
arahy.Tifrunner.gnm1.ann1.2022SK Arachis hypogaea HOM05D001410 ORTHO05D006167 7.8e-23 111.7 88 67.0
arahy.Tifrunner.gnm1.ann1.XGP1KG Arachis hypogaea HOM05D001090 ORTHO05D006167 7.8e-23 111.7 88 67.0
Ciclev10018812m.g Citrus clementina HOM05D001090 ORTHO05D006167 7.8e-23 111.7 88 63.6
COL.COLO4_23131 Corchorus olitorius HOM05D001090 ORTHO05D006167 7.8e-23 111.7 88 63.6
Glyma.19G221300 Glycine max HOM05D001090 ORTHO05D006167 7.8e-23 111.7 88 64.8
Lj1g0021730 Lotus japonicus HOM05D001090 ORTHO05D006167 7.8e-23 111.7 88 65.9
Lalb_Chr18g0046391 Lupinus albus HOM05D001090 ORTHO05D006167 7.8e-23 111.7 88 65.9
Solyc01g080850.4 Solanum lycopersicum HOM05D001090 ORTHO05D006167 7.8e-23 111.7 88 65.9
Sopen01g030630 Solanum pennellii HOM05D001090 ORTHO05D006167 7.8e-23 111.7 88 65.9
Atru.chr5.863 Acer truncatum HOM05D001090 ORTHO05D006167 1.0e-22 111.3 88 61.4
Oeu038075.1 Olea europaea HOM05D001090 ORTHO05D006167 1.0e-22 111.3 70 78.6
Duzib133G1021 Durio zibethinus HOM05D001090 ORTHO05D006167 1.3e-22 110.9 88 63.6
Duzib138G0040 Durio zibethinus HOM05D001090 ORTHO05D006167 1.3e-22 110.9 88 63.6
FAN23G2339 Fragaria x ananassa HOM05D001090 ORTHO05D006167 1.3e-22 110.9 133 51.1
FAN26G0681 Fragaria x ananassa HOM05D001090 ORTHO05D006167 1.3e-22 110.9 133 51.1
Medtr7g110640 Medicago truncatula HOM05D001090 ORTHO05D006167 1.3e-22 110.9 88 63.6
CAN.G100.57 Capsicum annuum HOM05D001090 ORTHO05D006167 1.7e-22 110.5 88 64.8
CiPaw.08G082800 Carya illinoinensis HOM05D001090 ORTHO05D006167 1.7e-22 110.5 88 64.8
Dinv12082 Davidia involucrata HOM05D001090 ORTHO05D006167 1.7e-22 110.5 88 64.8
Cfa004911 Carpinus fangiana HOM05D001090 ORTHO05D006167 3.0e-22 109.8 133 51.1
Haze_05146 Corylus avellana HOM05D001090 ORTHO05D006167 3.0e-22 109.8 133 51.9
MELO3C011813.2 Cucumis melo HOM05D001090 ORTHO05D006167 3.0e-22 109.8 150 47.3
CsaV3_5G029690 Cucumis sativus L. HOM05D001090 ORTHO05D002687 3.0e-22 109.8 150 47.3
FvH4_1g26250 Fragaria vesca HOM05D001090 ORTHO05D006167 3.0e-22 109.8 133 51.1
Gohir.D11G109400 Gossypium hirsutum HOM05D001090 ORTHO05D006167 3.0e-22 109.8 88 63.6
Gorai.007G117000 Gossypium raimondii HOM05D001090 ORTHO05D006167 3.0e-22 109.8 88 63.6
Gohir.D12G123700 Gossypium hirsutum HOM05D001090 ORTHO05D006167 3.9e-22 109.4 88 62.5
Gorai.008G134800 Gossypium raimondii HOM05D001090 ORTHO05D006167 3.9e-22 109.4 88 62.5
Peaxi162Scf00197g00004 Petunia axillaris HOM05D001090 ORTHO05D006167 3.9e-22 109.4 99 59.6
Dinv33168 Davidia involucrata HOM05D001090 ORTHO05D006167 5.0e-22 109.0 88 64.8
Eucgr.K00564 Eucalyptus grandis HOM05D001090 ORTHO05D006167 5.0e-22 109.0 88 62.5
Nitab4.5_0000222g0360 Nicotiana tabacum HOM05D001090 ORTHO05D006167 5.0e-22 109.0 88 63.6
Nitab4.5_0003092g0010 Nicotiana tabacum HOM05D001090 ORTHO05D006167 5.0e-22 109.0 88 63.6
Sed0008475 Sechium edule HOM05D001090 ORTHO05D006167 5.0e-22 109.0 88 64.8
Psat3g016720 Pisum sativum HOM05D001090 ORTHO05D006167 8.6e-22 108.2 88 62.5
QL12p034939 Quercus lobata HOM05D001090 ORTHO05D006167 8.6e-22 108.2 88 63.6
Peaxi162Scf02266g00001 Petunia axillaris HOM05D001090 ORTHO05D006167 1.1e-21 107.8 88 63.6
Prupe.3G002800 Prunus persica HOM05D001090 ORTHO05D006167 1.1e-21 107.8 88 62.5
GSVIVG01028251001 Vitis vinifera HOM05D001090 ORTHO05D006167 1.1e-21 107.8 133 50.4
Lalb_Chr02g0147141 Lupinus albus HOM05D001090 ORTHO05D006167 1.5e-21 107.5 88 63.6
Nn3g21945 Nelumbo nucifera HOM05D001090 ORTHO05D006167 1.5e-21 107.5 70 74.3
MD17G1284900 Malus domestica HOM05D001090 ORTHO05D006167 1.9e-21 107.1 88 60.2
Hund11624 Selenicereus undatus HOM05D001090 ORTHO05D006167 1.9e-21 107.1 70 75.7
DCAR_002936 Daucus carota HOM05D001090 ORTHO05D006167 2.5e-21 106.7 70 74.3
Nn4g25350 Nelumbo nucifera HOM05D001090 ORTHO05D006167 2.5e-21 106.7 88 62.5
Peaxi162Scf00309g00913 Petunia axillaris HOM05D001090 ORTHO05D006167 2.5e-21 106.7 88 63.6
TAR365G0940 Trochodendron aralioides HOM05D001090 ORTHO05D006167 2.5e-21 106.7 88 63.6
Ca_09245_v3 Cicer arietinum L. HOM05D001090 ORTHO05D006167 3.3e-21 106.3 88 62.5
Cc01_g21790 Coffea canephora HOM05D001090 ORTHO05D006167 3.3e-21 106.3 88 64.8
Os01g0321700 Oryza sativa ssp. japonica HOM05D001090 ORTHO05D006167 3.3e-21 106.3 88 60.2
EL10Ac7g17290 Beta vulgaris HOM05D001090 ORTHO05D006167 7.3e-21 105.1 120 50.8
Gohir.A12G120100 Gossypium hirsutum HOM05D001090 ORTHO05D006167 7.3e-21 105.1 88 60.2
Rhsim01G0000300 Rhododendron simsii HOM05D001090 ORTHO05D006167 7.3e-21 105.1 88 62.5
PSO761G0494 Papaver somniferum HOM05D001090 ORTHO05D006167 9.5e-21 104.8 88 60.2
PGR142G4102 Punica granatum HOM05D001090 ORTHO05D006167 9.5e-21 104.8 88 59.1
Lj1A8G48 Lonicera japonica HOM05D001090 ORTHO05D006167 1.2e-20 104.4 88 62.5
Zm00001eb340490 Zea mays HOM05D001090 ORTHO05D006167 1.2e-20 104.4 88 59.1
Aqoxy5G02821 Aquilegia oxysepala HOM05D001090 ORTHO05D006167 1.6e-20 104.0 165 43.0
AT4G01810 Arabidopsis thaliana HOM05D001090 ORTHO05D006167 1.6e-20 104.0 88 60.2
THA.LOC104801326 Tarenaya hassleriana HOM05D001090 ORTHO05D006167 1.6e-20 104.0 88 58.0
AL6G51490 Arabidopsis lyrata HOM05D001090 ORTHO05D006167 2.1e-20 103.6 88 59.1
Carub.0006s3541 Capsella rubella HOM05D001090 ORTHO05D006167 2.8e-20 103.2 88 60.2
PSO210G7365 Papaver somniferum HOM05D001090 ORTHO05D006167 2.8e-20 103.2 88 59.1
vmacro02360 Vaccinium macrocarpon HOM05D001090 ORTHO05D006167 2.8e-20 103.2 70 74.3
Aa31LG5G1560 Aethionema arabicum HOM05D001090 ORTHO05D002687 3.6e-20 102.8 88 60.2
BcaC04g24072 Brassica carinata HOM05D001090 ORTHO05D006167 3.6e-20 102.8 88 59.1
A09p01300 Brassica napus HOM05D001090 ORTHO05D006167 3.6e-20 102.8 88 59.1
C09p01350 Brassica napus HOM05D001090 ORTHO05D006167 3.6e-20 102.8 88 59.1
BolC9t53069H Brassica oleracea HOM05D001090 ORTHO05D006167 3.6e-20 102.8 88 59.1
BraA09t35795Z Brassica rapa HOM05D001090 ORTHO05D006167 3.6e-20 102.8 88 59.1
Thhalv10028421m.g Eutrema salsugineum HOM05D001090 ORTHO05D006167 3.6e-20 102.8 88 60.2
Ah.15g091800 Amaranthus hybridus HOM05D001090 ORTHO05D006167 4.7e-20 102.4 70 70.0
MD09G1290300 Malus domestica HOM05D001090 ORTHO05D006167 4.7e-20 102.4 88 59.1
BcaB01g02111 Brassica carinata HOM05D001090 ORTHO05D006167 6.2e-20 102.1 88 58.0
Actinidia25871 Actinidia chinensis HOM05D001090 ORTHO05D006167 8.1e-20 101.7 88 61.4
ATR0598G284 Amborella trichopoda HOM05D001090 ORTHO05D006167 8.1e-20 101.7 88 58.0
CARHR249790 Cardamine hirsuta HOM05D001090 ORTHO05D006167 1.1e-19 101.3 88 58.0
Sp6g01660 Schrenkiella parvula HOM05D001090 ORTHO05D006167 1.1e-19 101.3 88 58.0
DCAR_005717 Daucus carota HOM05D001090 ORTHO05D006167 1.8e-19 100.5 70 71.4
ECA233G3948 Erigeron canadensis HOM05D001090 ORTHO05D006167 1.8e-19 100.5 88 56.8
MBI19_g30286_MAGBIO Magnolia biondii HOM05D001090 ORTHO05D006167 1.8e-19 100.5 88 56.8
MBI18_g10371_MAGBIO Magnolia biondii HOM05D001410 ORTHO05D006167 6.8e-19 98.6 88 56.8
Migut.N00921 Erythranthe guttata HOM05D001090 ORTHO05D006167 8.9e-19 98.2 88 56.8
AUR62040321 Chenopodium quinoa HOM05D001090 ORTHO05D006167 1.2e-18 97.8 70 68.6
AUR62042130 Chenopodium quinoa HOM05D001090 ORTHO05D006167 1.2e-18 97.8 70 68.6
AUR62042131 Chenopodium quinoa HOM05D001090 ORTHO05D006167 1.2e-18 97.8 70 68.6
Lsat_1_v5_gn_8_125581 Lactuca sativa HOM05D001090 ORTHO05D006167 2.0e-18 97.1 88 51.1
HanXRQChr17g0555271 Helianthus annuus HOM05D001090 ORTHO05D006167 3.4e-18 96.3 88 53.4
SGA_v2.0_scaffold198G41106 Striga asiatica HOM05D001090 ORTHO05D006167 3.4e-18 96.3 89 57.3
HPP92_015635 Vanilla planifolia HOM05D001090 ORTHO05D006167 4.4e-18 95.9 88 55.7
MSTRG.15096 Avicennia marina HOM05D001090 ORTHO05D006167 9.8e-18 94.7 70 67.1
unitig_0.g2255 Utricularia gibba HOM05D001090 ORTHO05D006167 1.7e-17 94.0 121 47.1
CDE06G1382 Ceratophyllum demersum HOM05D001090 ORTHO05D006167 1.1e-16 91.3 88 52.3
Sc17g0000010 Simmondsia chinensis HOM05D001090 ORTHO05D006167 1.9e-16 90.5 118 46.6
SEGI_00376 Sequoiadendron giganteum HOM05D001090 ORTHO05D006167 2.4e-16 90.1 136 39.7
Nitab4.5_0001152g0730 Nicotiana tabacum HOM05D001090 ORTHO05D006167 3.2e-16 89.7 43 93.0
SMO119G0041 Selaginella moellendorffii HOM05D001090 ORTHO05D006167 4.1e-16 89.4 88 52.3
Mapoly0084s0040 Marchantia polymorpha HOM05D001090 ORTHO05D006167 5.4e-16 89.0 88 50.0
AagrBONN_evm.TU.Sc2ySwM_228.1595 Anthoceros agrestis HOM05D001090 ORTHO05D006167 2.3e-14 83.6 119 40.3
CBR_g939 Chara braunii HOM05D001090 ORTHO05D006167 2.5e-13 80.1 88 42.0
Pp3c24_9090 Physcomitrium patens HOM05D001090 ORTHO05D006167 1.2e-12 77.8 129 35.7
Pp3c8_12300 Physcomitrium patens HOM05D001090 ORTHO05D006167 3.6e-12 76.3 70 52.9
Peaxi162Scf02154g00004 Petunia axillaris HOM05D001090 ORTHO05D006167 4.7e-12 75.9 49 77.6
Nitab4.5_0000215g0050 Nicotiana tabacum HOM05D001090 ORTHO05D285144 1.1e-11 74.7 49 67.3
arahy.Tifrunner.gnm1.ann1.CM9LJ6 Arachis hypogaea HOM05D001090 ORTHO05D006167 3.4e-10 69.7 44 81.8
Nitab4.5_0000172g1620 Nicotiana tabacum HOM05D001410 ORTHO05D283583 5.8e-10 68.9 50 72.0
Nitab4.5_0010445g0020 Nicotiana tabacum HOM05D001090 ORTHO05D286492 7.8e-07 58.5 35 85.7


User provided reference genes

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