Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00860 Erythranthe guttata HOM05D005462 ORTHO05D006718 4.6e-191 672.5 949 100.0
MSTRG.27558 Avicennia marina HOM05D005462 ORTHO05D006718 1.2e-114 418.7 356 72.8
SalBow3G0159 Salvia bowleyana HOM05D005462 ORTHO05D006718 2.5e-112 411.0 345 69.0
SGA_v2.0_scaffold329G48874 Striga asiatica HOM05D005462 ORTHO05D006718 8.9e-110 402.5 343 63.3
Sopen11g002610 Solanum pennellii HOM05D005462 ORTHO05D006718 3.7e-100 370.5 348 61.8
Oeu033986.1 Olea europaea HOM05D005462 ORTHO05D006718 5.4e-99 366.7 350 63.7
Solyc11g006680.3 Solanum lycopersicum HOM05D005462 ORTHO05D006718 4.6e-98 363.6 348 61.2
PGSC0003DMG401007600 Solanum tuberosum HOM05D005462 ORTHO05D006718 4.6e-98 363.6 349 57.3
Dinv08599 Davidia involucrata HOM05D005462 ORTHO05D006718 1.2e-95 355.5 353 59.8
Nitab4.5_0003787g0050 Nicotiana tabacum HOM05D005462 ORTHO05D006718 2.1e-90 338.2 351 63.5
Peaxi162Scf00125g00414 Petunia axillaris HOM05D005462 ORTHO05D006718 4.6e-90 337.0 283 64.7
Hma1.2p1_0834F.1_g225780 Hydrangea macrophylla HOM05D005462 ORTHO05D006718 2.3e-89 334.7 370 58.6
TAR636G3557 Trochodendron aralioides HOM05D005462 ORTHO05D006718 4.3e-88 330.5 356 56.7
CSS0018603 Camellia sinensis var. sinensis HOM05D005462 ORTHO05D006718 7.3e-88 329.7 351 60.4
Nn2g14251 Nelumbo nucifera HOM05D005462 ORTHO05D006718 7.3e-88 329.7 346 55.8
ECA232G2701 Erigeron canadensis HOM05D005462 ORTHO05D006718 3.6e-87 327.4 353 57.2
Actinidia03844 Actinidia chinensis HOM05D005462 ORTHO05D006718 1.8e-86 325.1 382 54.5
ClCG05G021870 Citrullus lanatus HOM05D005462 ORTHO05D006718 8.9e-86 322.8 300 59.7
HanXRQChr11g0321421 Helianthus annuus HOM05D005462 ORTHO05D006718 1.2e-85 322.4 359 55.2
Sed0013359 Sechium edule HOM05D005462 ORTHO05D006718 7.6e-85 319.7 292 62.0
Sc09g0005160 Simmondsia chinensis HOM05D005462 ORTHO05D006718 1.7e-84 318.5 316 59.5
PSO339G2458 Papaver somniferum HOM05D005462 ORTHO05D006718 1.1e-83 315.8 360 54.7
Atru.chr12.1058 Acer truncatum HOM05D005462 ORTHO05D006718 5.4e-83 313.5 291 62.2
PSO384G2581 Papaver somniferum HOM05D005462 ORTHO05D006718 5.4e-83 313.5 356 53.9
PGR142G1862 Punica granatum HOM05D005462 ORTHO05D006718 7.8e-82 309.7 374 50.8
Ciclev10014488m.g Citrus clementina HOM05D005462 ORTHO05D006718 1.0e-81 309.3 353 54.7
Prupe.2G071400 Prunus persica HOM05D005462 ORTHO05D006718 3.9e-81 307.4 356 53.9
CsaV3_5G035270 Cucumis sativus L. HOM05D005462 ORTHO05D006718 4.3e-80 303.9 289 60.6
Hund06792 Selenicereus undatus HOM05D005462 ORTHO05D006718 5.6e-80 303.5 284 62.7
EL10Ac3g07311 Beta vulgaris HOM05D005462 ORTHO05D006718 1.6e-79 302.0 370 54.3
COL.COLO4_07193 Corchorus olitorius HOM05D005462 ORTHO05D006718 4.7e-79 300.4 317 57.4
EL10Ac3g07337 Beta vulgaris HOM05D005462 ORTHO05D006718 3.1e-78 297.7 317 54.3
MELO3C012341.2 Cucumis melo HOM05D005462 ORTHO05D006718 9.0e-78 296.2 296 58.8
DCAR_028403 Daucus carota HOM05D005462 ORTHO05D006718 2.6e-77 294.7 298 53.7
MD07G1061700 Malus domestica HOM05D005462 ORTHO05D006718 2.6e-77 294.7 364 55.8
CANSAT56G2776 Cannabis sativa HOM05D005462 ORTHO05D006718 3.4e-77 294.3 345 54.2
FAN06G4410 Fragaria x ananassa HOM05D005462 ORTHO05D006718 1.3e-76 292.4 303 56.1
PGSC0003DMG400016997 Solanum tuberosum HOM05D005462 ORTHO05D006718 1.3e-76 292.4 290 60.7
Eucgr.G02683 Eucalyptus grandis HOM05D005462 ORTHO05D006718 1.7e-76 292.0 301 59.5
FvH4_7g06690 Fragaria vesca HOM05D005462 ORTHO05D006718 2.2e-76 291.6 302 56.0
FAN10G0457 Fragaria x ananassa HOM05D005462 ORTHO05D006718 2.9e-76 291.2 299 57.2
Ah.04g150500 Amaranthus hybridus HOM05D005462 ORTHO05D006718 3.8e-76 290.8 351 52.7
Ca_13242_v3 Cicer arietinum L. HOM05D005462 ORTHO05D006718 3.8e-76 290.8 244 66.4
Ca_30156_v3 Cicer arietinum L. HOM05D005462 ORTHO05D006718 3.8e-76 290.8 244 66.4
Potri.008G017400 Populus trichocarpa HOM05D005462 ORTHO05D006718 3.8e-76 290.8 275 58.9
RcHm_v2.0_Chr1g0336351 Rosa chinensis HOM05D005462 ORTHO05D006718 3.8e-76 290.8 279 61.6
ATR0772G220 Amborella trichopoda HOM05D005462 ORTHO05D006718 1.1e-75 289.3 316 53.5
Cpa.g.sc54.12 Carica papaya HOM05D005462 ORTHO05D006718 1.1e-75 289.3 236 66.1
Cfa010538 Carpinus fangiana HOM05D005462 ORTHO05D006718 3.2e-75 287.7 343 54.2
TWI15G0792 Tripterygium wilfordii HOM05D005462 ORTHO05D006718 3.2e-75 287.7 274 62.4
Sabra08G0010900 Salix brachista HOM05D005462 ORTHO05D006718 4.2e-75 287.3 274 55.8
Aqoxy4G02697 Aquilegia oxysepala HOM05D005462 ORTHO05D006718 9.3e-75 286.2 320 54.4
CiPaw.13G042600 Carya illinoinensis HOM05D005462 ORTHO05D006718 1.2e-74 285.8 247 66.8
EL10Ac3g07314 Beta vulgaris HOM05D005462 ORTHO05D006718 1.6e-74 285.4 354 54.0
THA.LOC104823152 Tarenaya hassleriana HOM05D005462 ORTHO05D006718 3.5e-74 284.3 315 52.4
TPR.G19815 Trifolium pratense HOM05D005462 ORTHO05D006718 3.5e-74 284.3 249 60.2
Aa31LG11G5620 Aethionema arabicum HOM05D005462 ORTHO05D000003 1.0e-73 282.7 282 57.4
MBI01_g28354_MAGBIO Magnolia biondii HOM05D005462 ORTHO05D006718 1.0e-73 282.7 293 52.2
AUR62021021 Chenopodium quinoa HOM05D005462 ORTHO05D006718 1.7e-73 282.0 263 60.8
Gohir.A13G009500 Gossypium hirsutum HOM05D005462 ORTHO05D006718 2.3e-73 281.6 260 61.5
Lj6g0019256 Lotus japonicus HOM05D005462 ORTHO05D006718 3.0e-73 281.2 277 57.4
Medtr1g048080 Medicago truncatula HOM05D005462 ORTHO05D006718 3.9e-73 280.8 356 50.0
FAN03G2522 Fragaria x ananassa HOM05D005462 ORTHO05D006718 5.1e-73 280.4 300 56.3
Glyma.20G074200 Glycine max HOM05D005462 ORTHO05D006718 1.9e-72 278.5 297 54.9
Sopen04g004840 Solanum pennellii HOM05D005462 ORTHO05D006718 1.9e-72 278.5 311 57.6
Duzib128G2019 Durio zibethinus HOM05D005462 ORTHO05D006718 3.3e-72 277.7 346 52.9
Gohir.D13G010200 Gossypium hirsutum HOM05D005462 ORTHO05D006718 3.3e-72 277.7 296 56.1
Gorai.013G010900 Gossypium raimondii HOM05D005462 ORTHO05D006718 3.3e-72 277.7 296 56.1
Solyc04g009720.1 Solanum lycopersicum HOM05D005462 ORTHO05D006718 3.3e-72 277.7 249 66.7
Potri.010G241300 Populus trichocarpa HOM05D005462 ORTHO05D006718 4.3e-72 277.3 347 49.3
QL04p046981 Quercus lobata HOM05D005462 ORTHO05D006718 7.3e-72 276.6 274 61.7
Lalb_Chr01g0010721 Lupinus albus HOM05D005462 ORTHO05D006718 1.6e-71 275.4 296 55.1
Thecc.10G115600 Theobroma cacao HOM05D005462 ORTHO05D006718 2.8e-71 274.6 319 54.5
arahy.Tifrunner.gnm1.ann1.LTKS6Y Arachis hypogaea HOM05D005462 ORTHO05D006718 3.6e-71 274.2 349 51.6
GSVIVG01034651001 Vitis vinifera HOM05D005462 ORTHO05D006718 4.8e-71 273.9 348 51.4
Manes.07G085300 Manihot esculenta HOM05D005462 ORTHO05D006718 6.2e-71 273.5 198 65.2
arahy.Tifrunner.gnm1.ann1.D9T4RB Arachis hypogaea HOM05D005462 ORTHO05D006718 1.8e-70 271.9 349 51.0
Sp6g38020 Schrenkiella parvula HOM05D005462 ORTHO05D006718 3.1e-70 271.2 310 54.5
Carub.0006s0369 Capsella rubella HOM05D005462 ORTHO05D006718 1.2e-69 269.2 282 54.3
AL6G14460 Arabidopsis lyrata HOM05D005462 ORTHO05D006718 1.5e-69 268.9 280 55.4
VMungo0720G0270 Vigna mungo HOM05D005462 ORTHO05D006718 2.0e-69 268.5 306 53.6
A10p31410 Brassica napus HOM05D005462 ORTHO05D006718 5.8e-69 266.9 308 52.6
Thhalv10012596m.g Eutrema salsugineum HOM05D005462 ORTHO05D006718 9.9e-69 266.2 248 60.5
BraA10t45187Z Brassica rapa HOM05D005462 ORTHO05D006718 2.2e-68 265.0 285 56.1
C09p72080 Brassica napus HOM05D005462 ORTHO05D006718 3.8e-68 264.2 310 52.3
Phvul.007G234900 Phaseolus vulgaris HOM05D005462 ORTHO05D006718 6.4e-68 263.5 299 54.5
AT5G04810 Arabidopsis thaliana HOM05D005462 ORTHO05D006718 2.3e-65 255.0 290 52.8
BcaC06g32185 Brassica carinata HOM05D005462 ORTHO05D006718 5.1e-65 253.8 254 59.1
SEGI_04507 Sequoiadendron giganteum HOM05D005462 ORTHO05D006718 8.7e-65 253.1 310 47.4
BolC9t59953H Brassica oleracea HOM05D005462 ORTHO05D006718 1.1e-64 252.7 307 50.2
CAN.G186.57 Capsicum annuum HOM05D005462 ORTHO05D006718 4.5e-61 240.7 190 66.8
Os04g0684500 Oryza sativa ssp. japonica HOM05D005462 ORTHO05D006718 1.7e-60 238.8 244 56.1
CAN.G143.13 Capsicum annuum HOM05D005462 ORTHO05D006718 9.3e-59 233.0 151 76.8
AUR62018420 Chenopodium quinoa HOM05D005462 ORTHO05D006718 9.3e-59 233.0 368 48.1
Zm00001eb434090 Zea mays HOM05D005462 ORTHO05D006718 1.8e-57 228.8 304 45.4
Lj2C34T7 Lonicera japonica HOM05D005462 ORTHO05D006718 2.0e-53 215.3 145 73.8
Haze_03474 Corylus avellana HOM05D005462 ORTHO05D006718 2.9e-52 211.5 293 48.1
HPP92_013816 Vanilla planifolia HOM05D005462 ORTHO05D006718 4.6e-50 204.1 167 58.7
arahy.Tifrunner.gnm1.ann1.1Q3Q3C Arachis hypogaea HOM05D005462 ORTHO05D006718 6.7e-49 200.3 153 65.4
Lsat_1_v5_gn_9_47180 Lactuca sativa HOM05D005462 ORTHO05D006718 5.9e-45 187.2 191 59.7
Cc02_g09510 Coffea canephora HOM05D005462 ORTHO05D006718 1.3e-44 186.0 132 70.5
AagrBONN_evm.TU.Sc2ySwM_362.2024 Anthoceros agrestis HOM05D005462 ORTHO05D006718 5.5e-43 180.6 209 42.1
Oeu033987.1 Olea europaea HOM05D005462 ORTHO05D006718 1.4e-38 166.0 113 69.0
Pp3c16_280 Physcomitrium patens HOM05D005462 ORTHO05D006718 5.9e-37 160.6 185 40.5
Mapoly0061s0009 Marchantia polymorpha HOM05D005462 ORTHO05D006718 2.2e-36 158.7 189 42.9
Sabra10G0188800 Salix brachista HOM05D005462 ORTHO05D006718 2.2e-36 158.7 129 64.3
Peaxi162Scf00195g01111 Petunia axillaris HOM05D005462 ORTHO05D006718 5.0e-36 157.5 205 45.9
Nitab4.5_0001047g0040 Nicotiana tabacum HOM05D000001 ORTHO05D000003 8.8e-33 146.7 114 64.0
SMO165G0125 Selaginella moellendorffii HOM05D005462 ORTHO05D006718 7.4e-32 143.7 184 40.2
PGSC0003DMG402007600 Solanum tuberosum HOM05D005462 ORTHO05D006718 2.2e-31 142.1 108 62.0
SMO272G0004 Selaginella moellendorffii HOM05D005462 ORTHO05D006718 2.8e-31 141.7 184 40.2
Pp3c5_10110 Physcomitrium patens HOM05D005462 ORTHO05D006718 3.7e-31 141.4 193 38.3
Cpa.g.sc1114.1 Carica papaya HOM05D005462 ORTHO05D006718 1.4e-30 139.4 87 72.4
MBI01_g28355_MAGBIO Magnolia biondii HOM05D005462 ORTHO05D006718 4.1e-30 137.9 82 74.4
HanXRQChr11g0321471 Helianthus annuus HOM05D005462 ORTHO05D006718 2.6e-29 135.2 110 58.2
CSS0015574 Camellia sinensis var. sinensis HOM05D005462 ORTHO05D006718 3.5e-29 134.8 87 72.4
Oeu033283.1 Olea europaea HOM05D005462 ORTHO05D006718 4.5e-29 134.4 202 45.0
CDE06G1106 Ceratophyllum demersum HOM05D005462 ORTHO05D006718 5.9e-29 134.0 115 57.4
Lsat_1_v5_gn_9_53421 Lactuca sativa HOM05D005462 ORTHO05D006718 5.9e-29 134.0 89 68.5
Psat0s3982g0040 Pisum sativum HOM05D005462 ORTHO05D006718 8.5e-28 130.2 113 50.4
Glyma.10G122100 Glycine max HOM05D005462 ORTHO05D006718 3.2e-27 128.3 111 53.2
Solyc04g009730.4 Solanum lycopersicum HOM05D005462 ORTHO05D006718 1.2e-26 126.3 83 69.9
CARHR208470 Cardamine hirsuta HOM05D005462 ORTHO05D006718 2.7e-26 125.2 91 61.5
CBR_g70711 Chara braunii HOM05D005462 ORTHO05D006718 2.7e-26 125.2 216 38.0
HPP92_027471 Vanilla planifolia HOM05D005462 ORTHO05D006718 1.8e-25 122.5 75 70.7
HPP92_027470 Vanilla planifolia HOM05D005462 ORTHO05D006718 8.8e-25 120.2 77 71.4
HPP92_027469 Vanilla planifolia HOM05D005462 ORTHO05D006718 1.1e-24 119.8 85 65.9
vmacro05136 Vaccinium macrocarpon HOM05D005462 ORTHO05D006718 1.8e-22 112.5 75 73.3
vmacro07266 Vaccinium macrocarpon HOM05D005462 ORTHO05D006718 7.0e-22 110.5 59 83.1
CDE06G0092 Ceratophyllum demersum HOM05D005462 ORTHO05D006718 9.4e-19 100.1 81 56.8
Haze_03485 Corylus avellana HOM05D005462 ORTHO05D006718 1.7e-12 79.3 45 80.0
HPP92_013817 Vanilla planifolia HOM05D005462 ORTHO05D006718 5.0e-12 77.8 53 69.8
C09p30460 Brassica napus HOM05D003366 ORTHO05D004045 2.5e-11 75.5 62 58.1
BolC9t55910H Brassica oleracea HOM05D003366 ORTHO05D004045 4.2e-11 74.7 89 47.2
CBR_g46449 Chara braunii HOM05D002004 ORTHO05D002089 6.1e-10 70.9 163 30.1
CsaV3_1G017360 Cucumis sativus L. HOM05D005462 ORTHO05D006718 1.4e-09 69.7 45 73.3
Carub.0002s2389 Capsella rubella HOM05D005462 ORTHO05D006718 2.2e-07 62.4 43 67.4
Carub.0006s3020 Capsella rubella HOM05D005462 ORTHO05D006718 2.2e-07 62.4 43 67.4
TWI59G0738 Tripterygium wilfordii HOM05D000142 ORTHO05D010028 5.4e-06 57.8 97 36.1
THA.LOC104823445 Tarenaya hassleriana HOM05D000142 ORTHO05D001253 7.0e-06 57.4 103 35.9
ATR0304G030 Amborella trichopoda HOM05D000142 ORTHO05D010028 9.1e-06 57.0 88 36.4


User provided reference genes

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