Gene: CiPaw.13G042600

General Information

Structural Information

  • Species Carya illinoinensis
  • Gene Identifier CiPaw.13G042600
  • Transcript Identifier CiPaw.13G042600.1
  • Gene Type Coding gene
  • Location Chr13 : 4246052-4253951 : positive

Gene Family Information

  • ID HOM05D005462
  • #Genes/#Species 140/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id CiPaw.13G042600.v1.1
  • pacid 45811283
  • locus Caril.13G041400

Descriptions

  • Description PF00076//PF01535//PF13041 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // PPR repeat (PPR) // PPR repeat family (PPR_2)
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009790
ISO
PLAZA Integrative Orthologyembryo development AT5G04810
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT5G04810
GO:0009880
ISO
PLAZA Integrative Orthologyembryonic pattern specification AT5G04810
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT5G04810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G04810

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G04810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
IPR035979 RNA-binding domain superfamily
Mapman id Description
35.1 not assigned.annotated