Gene: Os04g0684500

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os04g0684500
  • Transcript Identifier Os04t0684500-02
  • Gene Type Coding gene
  • Location chr04 : 34958669-34964412 : positive

Gene Family Information

  • ID HOM05D005462
  • #Genes/#Species 140/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os04t0684500-02
  • MSU-ID LOC_Os04g58780.1
  • MSU-ID LOC_Os04g58780.2
  • symbol WSL5
  • name white stripe leaf 5
  • uniprot Q0J8W3

Descriptions

  • Description Pentatricopeptide repeat protein, Chloroplast development under cold stress
  • Description Hypothetical conserved gene.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048366
IEA
GOA Databaseleaf development
GO:0009880
IEA
GOA Databaseembryonic pattern specification
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0009790
ISO
PLAZA Integrative Orthologyembryo development AT5G04810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR033443 Pentacotripeptide-repeat region of PRORP
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR002885 Pentatricopeptide repeat
Mapman id Description
35.1 not assigned.annotated