Gene: Nitab4.5_0003787g0050

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0003787g0050
  • Transcript Identifier Nitab4.5_0003787g0050.1
  • Gene Type Coding gene
  • Location Nitab4.5_0003787 : 93398-104936 : negative

Gene Family Information

  • ID HOM05D005462
  • #Genes/#Species 140/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0003787g0050.1
  • SR1-identifier Nta09g05930.1

Descriptions

  • Description Pentatricopeptide repeat, RNA recognition motif domain, Nucleotide-binding, alpha-beta plait, Tetratricopeptide-like helical
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009790
ISO
PLAZA Integrative Orthologyembryo development AT5G04810
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT5G04810
GO:0009880
ISO
PLAZA Integrative Orthologyembryonic pattern specification AT5G04810
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT5G04810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G04810

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G04810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR000504 RNA recognition motif domain
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
35.1 not assigned.annotated