Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g068910 Medicago truncatula HOM05D000216 ORTHO05D000634 1.3e-23 112.1 52 100.0
Medtr1g068920 Medicago truncatula HOM05D000216 ORTHO05D000634 5.5e-22 106.7 52 96.2
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 6.3e-10 66.6 67 53.7
Psat4g147920 Pisum sativum HOM05D000216 ORTHO05D000634 6.3e-10 66.6 67 53.7
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 9.1e-09 62.8 67 50.7
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 9.1e-09 62.8 67 50.7
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 1.6e-08 62.0 69 47.8
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 2.7e-08 61.2 72 48.6
Hma1.2p1_0094F.1_g047104 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 3.5e-08 60.8 66 51.5
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 4.5e-08 60.5 67 49.3
AUR62024082 Chenopodium quinoa HOM05D000216 ORTHO05D000634 4.5e-08 60.5 67 49.3
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 4.5e-08 60.5 70 47.1
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 4.5e-08 60.5 70 47.1
Gohir.D13G143950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 4.5e-08 60.5 66 50.0
AUR62030122 Chenopodium quinoa HOM05D000216 ORTHO05D000634 7.7e-08 59.7 66 50.0
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 1.3e-07 58.9 66 50.0
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 1.3e-07 58.9 67 47.8
SGA_v2.0_scaffold119G32687 Striga asiatica HOM05D000216 ORTHO05D000634 1.3e-07 58.9 70 47.1
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 1.7e-07 58.5 66 50.0
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 1.7e-07 58.5 64 51.6
arahy.Tifrunner.gnm1.ann1.ZJYB0J Arachis hypogaea HOM05D000216 ORTHO05D000473 1.7e-07 58.5 64 51.6
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 1.7e-07 58.5 66 50.0
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 1.7e-07 58.5 66 50.0
BolSC44t60847H Brassica oleracea HOM05D000216 ORTHO05D000634 1.7e-07 58.5 66 50.0
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 1.7e-07 58.5 66 50.0
BraSC151t45695Z Brassica rapa HOM05D000216 ORTHO05D000634 1.7e-07 58.5 66 50.0
HanXRQChr00c0300g0573171 Helianthus annuus HOM05D000216 ORTHO05D000634 1.7e-07 58.5 66 48.5
HanXRQChr03g0073121 Helianthus annuus HOM05D000216 ORTHO05D000634 1.7e-07 58.5 66 48.5
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.7e-07 58.5 66 48.5
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 1.7e-07 58.5 66 48.5
HanXRQChr14g0436631 Helianthus annuus HOM05D000216 ORTHO05D000634 1.7e-07 58.5 66 48.5
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 1.7e-07 58.5 66 48.5
Lsat_1_v5_gn_9_5941 Lactuca sativa HOM05D000216 ORTHO05D000634 1.7e-07 58.5 66 48.5
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 2.2e-07 58.2 67 47.8
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 2.2e-07 58.2 67 47.8
CARHR281920 Cardamine hirsuta HOM05D000216 ORTHO05D000634 2.9e-07 57.8 66 48.5
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 2.9e-07 57.8 66 48.5
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 2.9e-07 57.8 66 48.5
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 2.9e-07 57.8 66 48.5
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 5.0e-07 57.0 66 48.5
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 5.0e-07 57.0 66 48.5
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 5.0e-07 57.0 67 44.8
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 6.5e-07 56.6 66 48.5
CAN.G386.8 Capsicum annuum HOM05D000216 ORTHO05D001131 6.5e-07 56.6 66 48.5
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.5e-07 56.6 66 48.5
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.5e-07 56.6 66 48.5
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.5e-07 56.6 66 48.5
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.5e-07 56.6 66 48.5
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.5e-07 56.6 66 48.5
PGSC0003DMG400020296 Solanum tuberosum HOM05D000216 ORTHO05D000634 6.5e-07 56.6 66 48.5
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 8.5e-07 56.2 67 44.8
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 8.5e-07 56.2 66 47.0
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 8.5e-07 56.2 66 47.0
Lalb_Chr04g0260931 Lupinus albus HOM05D000216 ORTHO05D002552 8.5e-07 56.2 66 47.0
Lalb_Chr09g0335371 Lupinus albus HOM05D000216 ORTHO05D000634 8.5e-07 56.2 66 47.0
Lalb_Chr22g0361661 Lupinus albus HOM05D000216 ORTHO05D000634 8.5e-07 56.2 66 47.0
Nitab4.5_0005637g0010 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.1e-06 55.8 66 47.0
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 1.5e-06 55.5 66 47.0
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 1.9e-06 55.1 66 48.5
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 2.5e-06 54.7 67 46.3
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 2.5e-06 54.7 65 47.7
CAN.G939.14 Capsicum annuum HOM05D000216 ORTHO05D000634 4.2e-06 53.9 66 47.0
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 4.2e-06 53.9 69 44.9
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-06 53.9 67 46.3
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-06 53.9 67 46.3
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-06 53.9 67 46.3
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-06 53.9 67 46.3
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-06 53.9 67 46.3
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-06 53.9 67 46.3
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-06 53.9 67 46.3
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-06 53.9 67 46.3
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-06 53.9 67 46.3
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-06 53.9 67 46.3
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-06 53.9 67 46.3
Solyc10g011720.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.2e-06 53.9 64 46.9
EL10Ac5g11996 Beta vulgaris HOM05D000216 ORTHO05D000634 5.5e-06 53.5 49 49.0
Thhalv10023328m.g Eutrema salsugineum HOM05D000216 ORTHO05D000634 7.2e-06 53.1 49 53.1
Nitab4.5_0000172g0280 Nicotiana tabacum HOM05D000216 ORTHO05D000634 9.5e-06 52.8 64 46.9


User provided reference genes

Program Settings