Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0173s0029 Marchantia polymorpha HOM05D000629 ORTHO05D000576 1.5e-47 192.6 99 100.0
Mapoly0053s0004 Marchantia polymorpha HOM05D000629 ORTHO05D000576 4.0e-45 184.5 99 94.9
Mapoly0173s0028 Marchantia polymorpha HOM05D000629 ORTHO05D000576 4.0e-13 78.2 79 53.2
Mapoly0053s0001 Marchantia polymorpha HOM05D000629 ORTHO05D253327 1.2e-09 66.6 42 81.0
Solyc02g087365.1 Solanum lycopersicum HOM05D000629 ORTHO05D000576 2.3e-08 62.4 71 43.7
Solyc02g087373.1 Solanum lycopersicum HOM05D000629 ORTHO05D000576 2.3e-08 62.4 71 43.7
Solyc02g087377.1 Solanum lycopersicum HOM05D000629 ORTHO05D000576 2.3e-08 62.4 71 43.7
HanXRQChr17g0570321 Helianthus annuus HOM05D000629 ORTHO05D000576 3.0e-08 62.0 81 35.8
Solyc02g087390.3 Solanum lycopersicum HOM05D000629 ORTHO05D000576 3.0e-08 62.0 85 42.4
Sopen02g032140 Solanum pennellii HOM05D000629 ORTHO05D000576 3.0e-08 62.0 71 45.1
SGA_v2.0_scaffold135G34805 Striga asiatica HOM05D000629 ORTHO05D000084 3.0e-08 62.0 83 34.9
Duzib264G1131 Durio zibethinus HOM05D000629 ORTHO05D000576 3.9e-08 61.6 72 41.7
Migut.K01349 Erythranthe guttata HOM05D000629 ORTHO05D000576 3.9e-08 61.6 81 37.0
Zm00001eb267730 Zea mays HOM05D000629 ORTHO05D000576 5.1e-08 61.2 71 42.3
Lsat_1_v5_gn_3_49260 Lactuca sativa HOM05D000629 ORTHO05D000576 8.6e-08 60.5 85 35.3
Sopen02g032130 Solanum pennellii HOM05D000629 ORTHO05D000013 8.6e-08 60.5 85 41.2
ECA246G4457 Erigeron canadensis HOM05D000629 ORTHO05D000576 1.5e-07 59.7 80 36.2
Pp3c8_17710 Physcomitrium patens HOM05D000629 ORTHO05D000576 1.5e-07 59.7 97 34.0
BNapus_Darmor_BZH_scaffold_119p00100 Brassica napus HOM05D000629 ORTHO05D000576 1.9e-07 59.3 93 36.6
BNapus_Darmor_BZH_scaffold_133p00100 Brassica napus HOM05D000629 ORTHO05D000576 1.9e-07 59.3 93 36.6
BNapus_Darmor_BZH_scaffold_97p00340 Brassica napus HOM05D000629 ORTHO05D000576 1.9e-07 59.3 93 36.6
BraA01t04659Z Brassica rapa HOM05D000629 ORTHO05D000576 1.9e-07 59.3 93 36.6
MCO01G398 Micromonas commoda HOM05D000629 ORTHO05D000576 1.9e-07 59.3 88 37.5
Pp3c8_19010 Physcomitrium patens HOM05D000629 ORTHO05D000576 1.9e-07 59.3 80 37.5
Sopen10g018960 Solanum pennellii HOM05D000629 ORTHO05D000576 1.9e-07 59.3 88 30.7
COL.COLO4_37017 Corchorus olitorius HOM05D000629 ORTHO05D000576 2.5e-07 58.9 73 38.4
Zm00001eb126360 Zea mays HOM05D000629 ORTHO05D000576 2.5e-07 58.9 82 37.8
Sopen02g016700 Solanum pennellii HOM05D000629 ORTHO05D000576 3.3e-07 58.5 83 34.9
TWI56G0743 Tripterygium wilfordii HOM05D000629 ORTHO05D000576 3.3e-07 58.5 72 37.5
unitig_21.g20510 Utricularia gibba HOM05D000629 ORTHO05D000576 3.3e-07 58.5 88 34.1
Mapoly0629s0001 Marchantia polymorpha HOM05D000629 ORTHO05D000576 4.3e-07 58.2 86 32.6
Oeu060596.1 Olea europaea HOM05D000629 ORTHO05D000576 4.3e-07 58.2 79 39.2
SGA_v2.0_scaffold205G41733 Striga asiatica HOM05D000629 ORTHO05D000576 4.3e-07 58.2 83 33.7
Aa31LG4G10840 Aethionema arabicum HOM05D000629 ORTHO05D000576 5.6e-07 57.8 69 39.1
C02p07460 Brassica napus HOM05D000629 ORTHO05D000576 5.6e-07 57.8 72 43.1
BolC2t06677H Brassica oleracea HOM05D000629 ORTHO05D000576 5.6e-07 57.8 72 43.1
CSS0002729 Camellia sinensis var. sinensis HOM05D000629 ORTHO05D000576 5.6e-07 57.8 98 34.7
Mapoly0016s0199 Marchantia polymorpha HOM05D063796 ORTHO05D000576 5.6e-07 57.8 92 34.8
Oeu018662.3 Olea europaea HOM05D000629 ORTHO05D000576 5.6e-07 57.8 90 32.2
TPR.G21137 Trifolium pratense HOM05D000629 ORTHO05D000576 5.6e-07 57.8 78 37.2
BcaB01g05087 Brassica carinata HOM05D000629 ORTHO05D000576 7.3e-07 57.4 71 40.8
Mapoly0007s0276 Marchantia polymorpha HOM05D000629 ORTHO05D000576 7.3e-07 57.4 74 36.5
SMO115G0316 Selaginella moellendorffii HOM05D000629 ORTHO05D000576 7.3e-07 57.4 71 39.4
CBR_g20366 Chara braunii HOM05D000629 ORTHO05D000576 9.5e-07 57.0 79 34.2
Gohir.A09G024000 Gossypium hirsutum HOM05D000629 ORTHO05D000576 9.5e-07 57.0 71 39.4
Gohir.D09G023200 Gossypium hirsutum HOM05D000629 ORTHO05D000576 9.5e-07 57.0 71 39.4
Gorai.006G027300 Gossypium raimondii HOM05D000629 ORTHO05D000576 9.5e-07 57.0 71 39.4
Gorai.012G058200 Gossypium raimondii HOM05D000629 ORTHO05D000576 9.5e-07 57.0 72 40.3
Nitab4.5_0003431g0040 Nicotiana tabacum HOM05D000629 ORTHO05D000576 9.5e-07 57.0 84 33.3
Oeu062378.1 Olea europaea HOM05D000629 ORTHO05D000576 9.5e-07 57.0 73 35.6
Peaxi162Scf00059g00016 Petunia axillaris HOM05D000629 ORTHO05D000576 9.5e-07 57.0 81 34.6
Solyc02g067570.3 Solanum lycopersicum HOM05D000629 ORTHO05D000576 9.5e-07 57.0 81 34.6
SGA_v2.0_scaffold30G12504 Striga asiatica HOM05D000629 ORTHO05D000576 9.5e-07 57.0 86 33.7
MSTRG.23972 Avicennia marina HOM05D000629 ORTHO05D000576 1.2e-06 56.6 83 33.7
Gohir.A11G068400 Gossypium hirsutum HOM05D000629 ORTHO05D000576 1.2e-06 56.6 70 38.6
Gohir.D11G072600 Gossypium hirsutum HOM05D000629 ORTHO05D000576 1.2e-06 56.6 70 38.6
Gorai.007G077800 Gossypium raimondii HOM05D000629 ORTHO05D000576 1.2e-06 56.6 70 38.6
Nitab4.5_0001727g0110 Nicotiana tabacum HOM05D000629 ORTHO05D000576 1.2e-06 56.6 83 33.7
SalBow1G0078 Salvia bowleyana HOM05D000629 ORTHO05D000576 1.2e-06 56.6 84 32.1
HPP92_004858 Vanilla planifolia HOM05D000629 ORTHO05D000576 1.2e-06 56.6 93 31.2
AT1G24190 Arabidopsis thaliana HOM05D000629 ORTHO05D000576 1.6e-06 56.2 80 33.8
HanXRQChr15g0476041 Helianthus annuus HOM05D000629 ORTHO05D000576 1.6e-06 56.2 84 33.3
Pp3c24_13770 Physcomitrium patens HOM05D000629 ORTHO05D000576 1.6e-06 56.2 97 32.0
Pp3c24_19330 Physcomitrium patens HOM05D000629 ORTHO05D000576 1.6e-06 56.2 96 30.2
SGA_v2.0_scaffold8G04282 Striga asiatica HOM05D000629 ORTHO05D000576 1.6e-06 56.2 83 34.9
THA.LOC104802413 Tarenaya hassleriana HOM05D000629 ORTHO05D000576 1.6e-06 56.2 94 30.9
Zm00001eb135790 Zea mays HOM05D000629 ORTHO05D000576 1.6e-06 56.2 71 36.6
Aa31LG4G10860 Aethionema arabicum HOM05D000629 ORTHO05D000576 2.1e-06 55.8 72 38.9
A07p13400 Brassica napus HOM05D000629 ORTHO05D000576 2.1e-06 55.8 71 36.6
BraA07t29112Z Brassica rapa HOM05D000629 ORTHO05D000576 2.1e-06 55.8 71 36.6
Dinv35005 Davidia involucrata HOM05D000629 ORTHO05D000576 2.1e-06 55.8 82 34.1
Migut.M00134 Erythranthe guttata HOM05D000629 ORTHO05D000576 2.1e-06 55.8 83 32.5
Gohir.D04G052000 Gossypium hirsutum HOM05D000629 ORTHO05D000576 2.1e-06 55.8 72 38.9
Os05g0100500 Oryza sativa ssp. japonica HOM05D000629 ORTHO05D000576 2.1e-06 55.8 66 40.9
Peaxi162Scf00129g00740 Petunia axillaris HOM05D000629 ORTHO05D000576 2.1e-06 55.8 73 37.0
Thecc.04G065500 Theobroma cacao HOM05D000629 ORTHO05D000576 2.1e-06 55.8 72 37.5
Zm00001eb334400 Zea mays HOM05D000629 ORTHO05D000576 2.1e-06 55.8 66 40.9
FAN02G0612 Fragaria x ananassa HOM05D000629 ORTHO05D000576 2.8e-06 55.5 72 38.9
RcHm_v2.0_Chr2g0169931 Rosa chinensis HOM05D000629 ORTHO05D000576 2.8e-06 55.5 72 38.9
THA.LOC104822375 Tarenaya hassleriana HOM05D000629 ORTHO05D000576 2.8e-06 55.5 74 37.8
vmacro01207 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 2.8e-06 55.5 86 33.7
MSTRG.3203 Avicennia marina HOM05D000629 ORTHO05D000576 3.6e-06 55.1 84 32.1
BcaC09g47650 Brassica carinata HOM05D000629 ORTHO05D000576 3.6e-06 55.1 79 38.0
BolC1t05951H Brassica oleracea HOM05D000629 ORTHO05D000576 3.6e-06 55.1 80 37.5
CAN.G1128.14 Capsicum annuum HOM05D000629 ORTHO05D000576 3.6e-06 55.1 73 35.6
Cpa.g.c28922 Carica papaya HOM05D000629 ORTHO05D000576 3.6e-06 55.1 72 37.5
Thhalv10009595m.g Eutrema salsugineum HOM05D000629 ORTHO05D000576 3.6e-06 55.1 84 39.3
Hma1.2p1_0265F.1_g106320 Hydrangea macrophylla HOM05D000629 ORTHO05D000576 3.6e-06 55.1 72 34.7
Lj2g0021309 Lotus japonicus HOM05D000629 ORTHO05D000576 3.6e-06 55.1 79 35.4
PSO541G4761 Papaver somniferum HOM05D000629 ORTHO05D000576 3.6e-06 55.1 93 30.1
SalBow1G7286 Salvia bowleyana HOM05D000629 ORTHO05D000576 3.6e-06 55.1 84 31.0
Sp6g29020 Schrenkiella parvula HOM05D000629 ORTHO05D000576 3.6e-06 55.1 71 39.4
Cc07_g02780 Coffea canephora HOM05D000629 ORTHO05D000576 4.7e-06 54.7 73 35.6
Lj7C406G4 Lonicera japonica HOM05D000629 ORTHO05D000576 4.7e-06 54.7 79 34.2
Prupe.3G276300 Prunus persica HOM05D000629 ORTHO05D000576 4.7e-06 54.7 72 36.1
THA.LOC104821055 Tarenaya hassleriana HOM05D000629 ORTHO05D000576 4.7e-06 54.7 71 39.4
unitig_744.g24345 Utricularia gibba HOM05D000629 ORTHO05D000576 4.7e-06 54.7 87 32.2
Zm00001eb135780 Zea mays HOM05D000629 ORTHO05D000576 4.7e-06 54.7 71 35.2
Aa31LG11G14500 Aethionema arabicum HOM05D000629 ORTHO05D000576 6.2e-06 54.3 73 37.0
Ah.14g087720 Amaranthus hybridus HOM05D000009 ORTHO05D000008 6.2e-06 54.3 78 37.2
AagrBONN_evm.TU.Sc2ySwM_362.209 Anthoceros agrestis HOM05D000629 ORTHO05D000576 6.2e-06 54.3 73 35.6
BraA02t05257Z Brassica rapa HOM05D000629 ORTHO05D000576 6.2e-06 54.3 72 41.7
Carub.0001s2368 Capsella rubella HOM05D000629 ORTHO05D000576 6.2e-06 54.3 80 33.8
Duzib268G1764 Durio zibethinus HOM05D000629 ORTHO05D000576 6.2e-06 54.3 84 32.1
Lj3A1046T48 Lonicera japonica HOM05D000629 ORTHO05D000576 6.2e-06 54.3 80 33.8
Sc11g0008020 Simmondsia chinensis HOM05D000629 ORTHO05D000576 6.2e-06 54.3 82 31.7
SGA_v2.0_scaffold224G42970 Striga asiatica HOM05D000629 ORTHO05D000576 6.2e-06 54.3 86 31.4
THA.LOC104808829 Tarenaya hassleriana HOM05D000629 ORTHO05D000576 6.2e-06 54.3 72 36.1
TPR.G25527 Trifolium pratense HOM05D008753 ORTHO05D010999 6.2e-06 54.3 72 38.9
Carub.0006s1318 Capsella rubella HOM05D000629 ORTHO05D000576 8.1e-06 53.9 71 38.0
Ciclev10010908m.g Citrus clementina HOM05D000629 ORTHO05D000576 8.1e-06 53.9 77 36.4
Eucgr.B03381 Eucalyptus grandis HOM05D000629 ORTHO05D000576 8.1e-06 53.9 82 34.1
Gohir.A12G057900 Gossypium hirsutum HOM05D000629 ORTHO05D000576 8.1e-06 53.9 73 37.0
Gohir.D12G057700 Gossypium hirsutum HOM05D000629 ORTHO05D000576 8.1e-06 53.9 72 37.5
Gorai.008G060800 Gossypium raimondii HOM05D000629 ORTHO05D000576 8.1e-06 53.9 72 37.5
Nn4g22953 Nelumbo nucifera HOM05D000629 ORTHO05D000576 8.1e-06 53.9 72 36.1
Pp3c8_14940 Physcomitrium patens HOM05D000629 ORTHO05D000576 8.1e-06 53.9 80 33.8
Prupe.3G276200 Prunus persica HOM05D000629 ORTHO05D000576 8.1e-06 53.9 75 36.0


User provided reference genes

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