Gene: Cc07_g02780
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc07_g02780
- Transcript Identifier Cc07_g02780.1
- Gene Type Coding gene
- Location chr7 : 1850505-1859291 : negative
Gene Family Information
- ID HOM05D000629
- #Genes/#Species 905/100
- Phylogenetic origin
- ID ORTHO05D000576
- #Genes/#Species 768/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- UniProtKB F6HV63
- UniProtKB Q9LFQ3
- UniProtKB Q9SRH9
- UniProtKB I1N5Z6
- UniProtKB O48686
- UniProtKB I1LWG1
- id GSCOCG00039484001
Descriptions
- Description Paired amphipathic helix protein Sin3-like 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT1G24190 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT1G24190 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003714 | IEA | InterPro | transcription corepressor activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G24230 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G01320 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G15020 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.3.2.1.1.2.2 | Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.SNL-HDA19 histone deacetylase complex.key scaffold component SNL |