Gene: Zm00001eb126360

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb126360
  • Transcript Identifier Zm00001eb126360_T001
  • Gene Type Coding gene
  • Location 3 : 28947775-28957001 : negative

Gene Family Information

  • ID HOM05D000629
  • #Genes/#Species 905/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb126360_T001
  • pid Zm00001eb126360_P001
  • uniprot A0A1D6MN62
  • uniprot A0A1D6MN84
  • uniprot A0A1D6MN63
  • uniprot A0A1D6MN85
  • uniprot A0A3L6FLD7
  • uniprot A0A1D6MN69
  • uniprot A0A1D6MN66
  • uniprot A0A1D6MN88
  • uniprot A0A1D6MNA1
  • uniprot A0A1D6MN89
  • uniprot A0A1D6MNA0
  • entrez 103649898
  • refseq XM_008675581.1
  • refseq XP_008673803.1
  • V4_identifier Zm00001d040123

Descriptions

  • Description Zm00001e017111
  • Description Paired amphipathic helix protein Sin3-like 3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045892
IEA
GOA Databasenegative regulation of transcription, DNA-templated
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0016575
IBA
GOA Databasehistone deacetylation
GO:0000122
IBA
GOA Databasenegative regulation of transcription by RNA polymerase II
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT1G24190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003714
IBA
IEA
GOA Databasetranscription corepressor activity
GO:0003714
IEA
InterProtranscription corepressor activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G24230

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0000785
IBA
GOA Databasechromatin
GO:0000118
IBA
GOA Databasehistone deacetylase complex
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G15020

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039774 Transcriptional regulatory protein Sin3-like
IPR003822 Paired amphipathic helix
IPR036600 Paired amphipathic helix superfamily
IPR013194 Histone deacetylase interacting domain
IPR031693 Sin3, C-terminal
Mapman id Description
12.3.2.1.1.2.2 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.SNL-HDA19 histone deacetylase complex.key scaffold component SNL