Gene: COL.COLO4_37017

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_37017
  • Transcript Identifier COL.rna35698
  • Gene Type Coding gene
  • Location AWUE01023784.1 : 34362-41625 : positive

Gene Family Information

  • ID HOM05D000629
  • #Genes/#Species 905/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna35698
  • GenBank OMO52741.1
  • id gene36989
  • gene_name COLO4_37017
  • uniprot A0A1R3G3S0

Descriptions

  • Description Paired amphipathic helix
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045892
IEA
GOA Databasenegative regulation of transcription, DNA-templated
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003714
IEA
GOA Databasetranscription corepressor activity
GO:0003714
IEA
InterProtranscription corepressor activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G15040

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G15020

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036600 Paired amphipathic helix superfamily
IPR003822 Paired amphipathic helix
IPR039774 Transcriptional regulatory protein Sin3-like
IPR013194 Histone deacetylase interacting domain
IPR031693 Sin3, C-terminal
Mapman id Description
12.3.2.1.1.2.2 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.SNL-HDA19 histone deacetylase complex.key scaffold component SNL