Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0052s0123 Marchantia polymorpha HOM05D003791 ORTHO05D004961 1.5e-262 909.1 473 100.0
Mapoly0052s0125 Marchantia polymorpha HOM05D003791 ORTHO05D004961 7.6e-203 710.7 443 85.6
Thecc.09G295700 Theobroma cacao HOM05D003791 ORTHO05D004961 1.9e-153 546.6 415 65.8
Gohir.A09G087400 Gossypium hirsutum HOM05D003791 ORTHO05D004961 1.6e-152 543.5 417 64.3
Aqoxy1G01033 Aquilegia oxysepala HOM05D003791 ORTHO05D004961 2.7e-152 542.7 417 65.5
PGR102G1149 Punica granatum HOM05D003791 ORTHO05D004961 4.7e-152 542.0 417 65.0
Duzib168G1694 Durio zibethinus HOM05D003791 ORTHO05D004961 6.1e-152 541.6 417 64.5
Pp3c15_14510 Physcomitrium patens HOM05D003791 ORTHO05D004961 8.0e-152 541.2 415 64.3
TAR369G0287 Trochodendron aralioides HOM05D003791 ORTHO05D004961 4.0e-151 538.9 417 64.7
CSS0014729 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 1.2e-150 537.3 415 64.3
Glyma.11G191000 Glycine max HOM05D003791 ORTHO05D004961 1.2e-150 537.3 415 64.8
Gohir.D09G087100 Gossypium hirsutum HOM05D003791 ORTHO05D004961 1.2e-150 537.3 417 63.8
Gorai.006G103500 Gossypium raimondii HOM05D003791 ORTHO05D004961 1.2e-150 537.3 440 62.0
Prupe.6G114800 Prunus persica HOM05D003791 ORTHO05D004961 1.5e-150 537.0 415 63.1
Hma1.2p1_0051F.1_g029640 Hydrangea macrophylla HOM05D003791 ORTHO05D004961 2.0e-150 536.6 415 63.9
Cc01_g10100 Coffea canephora HOM05D003791 ORTHO05D004961 2.6e-150 536.2 417 64.0
Manes.11G154100 Manihot esculenta HOM05D003791 ORTHO05D004961 3.3e-150 535.8 417 63.5
COL.COLO4_19230 Corchorus olitorius HOM05D003791 ORTHO05D004961 5.7e-150 535.0 410 64.9
QL03p064641 Quercus lobata HOM05D003791 ORTHO05D004961 7.5e-150 534.6 409 64.3
TAR623G0647 Trochodendron aralioides HOM05D003791 ORTHO05D004961 9.7e-150 534.3 417 64.3
Haze_23510 Corylus avellana HOM05D003791 ORTHO05D004961 1.7e-149 533.5 415 63.6
Eucgr.B03911 Eucalyptus grandis HOM05D003791 ORTHO05D004961 2.2e-149 533.1 415 64.1
Glyma.12G083300 Glycine max HOM05D003791 ORTHO05D004961 2.2e-149 533.1 415 64.1
MD03G1129800 Malus domestica HOM05D003791 ORTHO05D004961 2.2e-149 533.1 415 62.7
Lj3g0020816 Lotus japonicus HOM05D003791 ORTHO05D004961 4.8e-149 531.9 415 63.4
Sc21g0003980 Simmondsia chinensis HOM05D003791 ORTHO05D004961 4.8e-149 531.9 415 63.4
CiPaw.13G143800 Carya illinoinensis HOM05D003791 ORTHO05D004961 6.3e-149 531.6 415 63.6
Atru.chr3.3491 Acer truncatum HOM05D003791 ORTHO05D004961 8.2e-149 531.2 415 63.4
arahy.Tifrunner.gnm1.ann1.BYIB55 Arachis hypogaea HOM05D003791 ORTHO05D004961 1.1e-148 530.8 415 63.4
TWI79G0622 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 1.1e-148 530.8 415 63.6
Phvul.011G088100 Phaseolus vulgaris HOM05D003791 ORTHO05D004961 1.4e-148 530.4 415 63.6
VMungo1127G0886 Vigna mungo HOM05D003791 ORTHO05D004961 1.4e-148 530.4 415 63.6
MD11G1151700 Malus domestica HOM05D003791 ORTHO05D004961 1.8e-148 530.0 415 62.9
Lalb_Chr22g0350471 Lupinus albus HOM05D003791 ORTHO05D004961 2.4e-148 529.6 415 62.9
Potri.001G212700 Populus trichocarpa HOM05D003791 ORTHO05D004961 2.4e-148 529.6 436 63.1
GSVIVG01031443001 Vitis vinifera HOM05D003791 ORTHO05D004961 2.4e-148 529.6 412 64.1
ATR0580G402 Amborella trichopoda HOM05D003791 ORTHO05D004961 3.1e-148 529.3 415 62.9
HanXRQChr13g0403561 Helianthus annuus HOM05D003791 ORTHO05D004961 3.1e-148 529.3 419 62.8
PSO339G5439 Papaver somniferum HOM05D003791 ORTHO05D004961 3.1e-148 529.3 417 63.3
Lsat_1_v5_gn_6_42140 Lactuca sativa HOM05D003791 ORTHO05D004961 7.0e-148 528.1 419 62.3
SMO118G0273 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 7.0e-148 528.1 436 61.2
Ciclev10027764m.g Citrus clementina HOM05D003791 ORTHO05D004961 9.1e-148 527.7 415 63.9
Migut.N02533 Erythranthe guttata HOM05D003791 ORTHO05D004961 1.2e-147 527.3 415 63.1
Lj3g0026116 Lotus japonicus HOM05D003791 ORTHO05D004961 1.2e-147 527.3 415 62.9
Gohir.D08G013600 Gossypium hirsutum HOM05D003791 ORTHO05D004961 1.6e-147 526.9 415 62.7
CiPaw.14G105700 Carya illinoinensis HOM05D003791 ORTHO05D004961 2.0e-147 526.6 415 63.4
Actinidia07195 Actinidia chinensis HOM05D003791 ORTHO05D004961 2.7e-147 526.2 415 63.4
Potri.009G002400 Populus trichocarpa HOM05D003791 ORTHO05D004961 2.7e-147 526.2 416 63.5
arahy.Tifrunner.gnm1.ann1.53PLGZ Arachis hypogaea HOM05D003791 ORTHO05D004961 3.5e-147 525.8 420 63.3
arahy.Tifrunner.gnm1.ann1.DSMN0K Arachis hypogaea HOM05D003791 ORTHO05D004961 3.5e-147 525.8 420 63.3
Duzib170G1073 Durio zibethinus HOM05D003791 ORTHO05D004961 5.9e-147 525.0 419 62.3
Gorai.004G007900 Gossypium raimondii HOM05D003791 ORTHO05D004961 7.7e-147 524.6 415 62.7
Solyc06g074740.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 7.7e-147 524.6 415 62.7
Actinidia24158 Actinidia chinensis HOM05D003791 ORTHO05D004961 1.3e-146 523.9 415 62.9
ECA233G0170 Erigeron canadensis HOM05D003791 ORTHO05D004961 1.3e-146 523.9 419 62.1
PSO063G7392 Papaver somniferum HOM05D003791 ORTHO05D004961 1.7e-146 523.5 417 62.8
Cfa010128 Carpinus fangiana HOM05D003791 ORTHO05D004961 2.2e-146 523.1 410 63.2
CsaV3_1G014360 Cucumis sativus L. HOM05D003791 ORTHO05D004961 3.8e-146 522.3 415 63.1
Sabra04G0148600 Salix brachista HOM05D003791 ORTHO05D004961 3.8e-146 522.3 445 61.8
CAN.G1432.22 Capsicum annuum HOM05D003791 ORTHO05D004961 8.5e-146 521.2 417 62.4
CANSAT64G0962 Cannabis sativa HOM05D003791 ORTHO05D004961 1.1e-145 520.8 415 62.9
RcHm_v2.0_Chr5g0056311 Rosa chinensis HOM05D003791 ORTHO05D004961 1.1e-145 520.8 415 61.4
HPP92_012843 Vanilla planifolia HOM05D003791 ORTHO05D004961 1.5e-145 520.4 415 62.4
HPP92_012850 Vanilla planifolia HOM05D003791 ORTHO05D004961 1.9e-145 520.0 415 62.2
MELO3C004827.2 Cucumis melo HOM05D003791 ORTHO05D004961 2.5e-145 519.6 415 62.9
FAN21G3702 Fragaria x ananassa HOM05D003791 ORTHO05D004961 2.5e-145 519.6 415 61.4
Gohir.A08G003200 Gossypium hirsutum HOM05D003791 ORTHO05D004961 2.5e-145 519.6 415 62.2
FAN16G1431 Fragaria x ananassa HOM05D003791 ORTHO05D004961 3.2e-145 519.2 415 61.7
Nitab4.5_0003470g0120 Nicotiana tabacum HOM05D003791 ORTHO05D004961 3.2e-145 519.2 409 61.9
Ca_19327_v3 Cicer arietinum L. HOM05D003791 ORTHO05D004961 4.2e-145 518.8 416 62.3
Sopen06g031150 Solanum pennellii HOM05D003791 ORTHO05D004961 4.2e-145 518.8 415 62.2
Nitab4.5_0004517g0020 Nicotiana tabacum HOM05D003791 ORTHO05D004961 5.5e-145 518.5 415 61.2
Sopen11g026300 Solanum pennellii HOM05D003791 ORTHO05D004961 5.5e-145 518.5 446 62.1
Rhsim13G0102400 Rhododendron simsii HOM05D003791 ORTHO05D004961 7.2e-145 518.1 410 62.9
Solyc11g066560.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 7.2e-145 518.1 446 62.1
CSS0049530 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 1.2e-144 517.3 419 62.3
Manes.04G011800 Manihot esculenta HOM05D003791 ORTHO05D004961 1.6e-144 516.9 415 62.2
FvH4_3g30370 Fragaria vesca HOM05D003791 ORTHO05D004961 4.7e-144 515.4 415 61.2
SEGI_35272 Sequoiadendron giganteum HOM05D003791 ORTHO05D004961 4.7e-144 515.4 414 61.4
FAN11G2854 Fragaria x ananassa HOM05D003791 ORTHO05D004961 6.1e-144 515.0 415 61.4
Psat7g191520 Pisum sativum HOM05D003791 ORTHO05D004961 6.1e-144 515.0 415 61.2
AUR62040426 Chenopodium quinoa HOM05D003791 ORTHO05D004961 1.4e-143 513.8 415 61.7
THA.LOC104800566 Tarenaya hassleriana HOM05D003791 ORTHO05D004961 1.4e-143 513.8 415 61.7
TPR.G35046 Trifolium pratense HOM05D003791 ORTHO05D004961 1.4e-143 513.8 415 61.7
Carub.0001s0755 Capsella rubella HOM05D003791 ORTHO05D004961 1.8e-143 513.5 416 60.6
CARHR008020 Cardamine hirsuta HOM05D003791 ORTHO05D004961 1.8e-143 513.5 416 61.3
Sabra09G0001100 Salix brachista HOM05D003791 ORTHO05D004961 1.8e-143 513.5 416 62.3
Medtr4g056480 Medicago truncatula HOM05D003791 ORTHO05D004961 2.3e-143 513.1 415 61.2
Sed0022437 Sechium edule HOM05D003791 ORTHO05D004961 2.3e-143 513.1 417 61.2
Nn2g13909 Nelumbo nucifera HOM05D003791 ORTHO05D004961 3.0e-143 512.7 417 62.6
AL1G18600 Arabidopsis lyrata HOM05D003791 ORTHO05D004961 2.0e-142 510.0 416 60.3
AT1G08190 Arabidopsis thaliana HOM05D003791 ORTHO05D004961 2.6e-142 509.6 416 60.6
EL10Ac9g20994 Beta vulgaris HOM05D003791 ORTHO05D004961 2.6e-142 509.6 415 60.5
Aa31LG11G12710 Aethionema arabicum HOM05D003791 ORTHO05D004961 3.4e-142 509.2 416 60.1
Peaxi162Scf00150g00213 Petunia axillaris HOM05D003791 ORTHO05D004961 5.7e-142 508.4 417 61.2
Ah.01g004870 Amaranthus hybridus HOM05D003791 ORTHO05D004961 3.7e-141 505.8 415 61.0
CAN.G546.67 Capsicum annuum HOM05D003791 ORTHO05D004961 3.7e-141 505.8 410 61.2
unitig_22.g5654 Utricularia gibba HOM05D003791 ORTHO05D004961 3.7e-141 505.8 435 58.9
DCAR_018754 Daucus carota HOM05D003791 ORTHO05D004961 4.8e-141 505.4 438 59.4
Hund00856 Selenicereus undatus HOM05D003791 ORTHO05D004961 4.8e-141 505.4 415 60.2
Nn6g35165 Nelumbo nucifera HOM05D003791 ORTHO05D004961 1.8e-140 503.4 377 66.6
SalBow3G1938 Salvia bowleyana HOM05D003791 ORTHO05D004961 3.1e-140 502.7 421 60.6
BolC5t29388H Brassica oleracea HOM05D003791 ORTHO05D004961 4.1e-140 502.3 416 60.3
AUR62024040 Chenopodium quinoa HOM05D003791 ORTHO05D004961 7.0e-140 501.5 412 60.9
Thhalv10006697m.g Eutrema salsugineum HOM05D003791 ORTHO05D004961 9.1e-140 501.1 416 60.3
AagrBONN_evm.TU.Sc2ySwM_368.1978 Anthoceros agrestis HOM05D003791 ORTHO05D004961 3.5e-139 499.2 423 59.1
C05p06320 Brassica napus HOM05D003791 ORTHO05D004961 3.5e-139 499.2 429 58.7
ClCG09G017560 Citrullus lanatus HOM05D003791 ORTHO05D004961 4.5e-139 498.8 469 56.1
A06p05250 Brassica napus HOM05D003791 ORTHO05D004961 1.0e-138 497.7 428 58.6
BraA06t23732Z Brassica rapa HOM05D003791 ORTHO05D004961 1.0e-138 497.7 428 58.6
SHI06192 Sapria himalayana HOM05D003791 ORTHO05D004961 2.9e-138 496.1 416 59.9
Sp1g06840 Schrenkiella parvula HOM05D003791 ORTHO05D004961 3.8e-138 495.7 416 60.1
DCAR_006140 Daucus carota HOM05D003791 ORTHO05D004961 8.6e-138 494.6 415 59.3
Nitab4.5_0000173g0320 Nicotiana tabacum HOM05D003791 ORTHO05D004961 1.5e-137 493.8 417 60.4
CDE09G0630 Ceratophyllum demersum HOM05D003791 ORTHO05D004961 5.5e-137 491.9 416 59.6
vmacro03244 Vaccinium macrocarpon HOM05D003791 ORTHO05D004961 7.2e-137 491.5 391 63.7
Os04g0195000 Oryza sativa ssp. japonica HOM05D003791 ORTHO05D004961 7.5e-134 481.5 419 57.8
Lj1A216G25 Lonicera japonica HOM05D003791 ORTHO05D004961 3.7e-133 479.2 431 58.5
arahy.Tifrunner.gnm1.ann1.SF2S3L Arachis hypogaea HOM05D003791 ORTHO05D004961 4.5e-131 472.2 415 56.6
Oeu035522.1 Olea europaea HOM05D003791 ORTHO05D004961 3.0e-127 459.5 369 62.6
CSS0001832 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 4.0e-127 459.1 383 60.8
Lalb_Chr03g0027821 Lupinus albus HOM05D003791 ORTHO05D004961 5.8e-126 455.3 415 55.7
arahy.Tifrunner.gnm1.ann1.EI6HBJ Arachis hypogaea HOM05D003791 ORTHO05D004961 1.4e-124 450.7 415 56.6
SGA_v2.0_scaffold83G26445 Striga asiatica HOM05D003791 ORTHO05D004961 1.0e-122 444.5 368 61.4
Peaxi162Scf00114g00310 Petunia axillaris HOM05D003791 ORTHO05D004961 1.6e-120 437.2 380 58.9
Dinv29393 Davidia involucrata HOM05D003791 ORTHO05D004961 8.1e-112 408.3 325 63.4
DCAR_015496 Daucus carota HOM05D003791 ORTHO05D004961 1.2e-107 394.4 415 50.4
TWI75G0171 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 8.7e-82 308.5 278 57.9
Cpa.g.sc47.26 Carica papaya HOM05D003791 ORTHO05D004961 2.0e-78 297.4 239 64.0
PRCOL_00006500 Prasinoderma coloniale HOM05D003791 ORTHO05D004961 8.2e-72 275.4 437 40.7
MCO08G243 Micromonas commoda HOM05D003791 ORTHO05D004961 1.5e-70 271.2 410 39.8
CBR_g63066 Chara braunii HOM05D003791 ORTHO05D000002 7.9e-67 258.8 337 41.2
SMO266G0036 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 3.1e-63 246.9 392 40.6
Dinv12566 Davidia involucrata HOM05D003791 ORTHO05D004961 1.5e-49 201.4 176 58.5
CBR_g75953 Chara braunii HOM05D003791 ORTHO05D004961 1.8e-39 167.9 139 56.1
DCAR_031428 Daucus carota HOM05D003791 ORTHO05D004961 7.7e-38 162.5 138 60.1
Cre03.g209281 Chlamydomonas reinhardtii HOM05D003791 ORTHO05D004961 1.4e-31 141.7 313 30.0
CSS0038043 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 5.5e-28 129.8 76 75.0
CSS0018078 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 1.6e-27 128.3 76 73.7
CSS0039906 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 2.1e-27 127.9 75 76.0
CSS0036642 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 8.0e-27 125.9 76 73.7
CSS0027626 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 8.8e-26 122.5 73 75.3
CSS0017290 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 1.2e-25 122.1 75 72.0
GSVIVG01024429001 Vitis vinifera HOM05D003791 ORTHO05D013423 6.6e-21 106.3 109 54.1
Nn2g15995 Nelumbo nucifera HOM05D003791 ORTHO05D004961 3.4e-17 94.0 65 64.6
GSVIVG01004781001 Vitis vinifera HOM05D003791 ORTHO05D013423 3.3e-12 77.4 62 59.7
PSO339G1674 Papaver somniferum HOM05D003791 ORTHO05D004961 9.8e-09 65.9 42 61.9
Pp3c9_21930 Physcomitrium patens HOM05D003791 ORTHO05D308914 1.1e-07 62.4 48 60.4
Nn6g35161 Nelumbo nucifera HOM05D003791 ORTHO05D004961 4.1e-07 60.5 56 51.8


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