Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G084100 Manihot esculenta HOM05D005149 ORTHO05D006251 3.8e-249 864.4 440 100.0
Haze_03404 Corylus avellana HOM05D005149 ORTHO05D006251 6.4e-188 661.0 444 75.7
Potri.010G246400 Populus trichocarpa HOM05D005149 ORTHO05D006251 1.9e-187 659.4 440 77.0
CiPaw.13G047200 Carya illinoinensis HOM05D005149 ORTHO05D006251 5.6e-184 647.9 430 75.6
CANSAT56G0938 Cannabis sativa HOM05D005149 ORTHO05D006251 2.1e-183 646.0 448 73.4
Gohir.A11G310500 Gossypium hirsutum HOM05D005149 ORTHO05D006251 2.1e-183 646.0 454 73.8
MD02G1263600 Malus domestica HOM05D005149 ORTHO05D006251 6.9e-182 641.0 450 74.0
Gohir.A09G246100 Gossypium hirsutum HOM05D005149 ORTHO05D006251 9.0e-182 640.6 454 73.1
Psat0s3059g0040 Pisum sativum HOM05D005149 ORTHO05D006251 4.5e-181 638.3 445 73.0
Thecc.10G129400 Theobroma cacao HOM05D005149 ORTHO05D006251 5.8e-181 637.9 455 72.3
Gohir.D13G181800 Gossypium hirsutum HOM05D005149 ORTHO05D006251 9.9e-181 637.1 454 72.9
Gorai.013G207400 Gossypium raimondii HOM05D005149 ORTHO05D006251 9.9e-181 637.1 455 72.7
QL04p050393 Quercus lobata HOM05D005149 ORTHO05D006251 2.2e-180 636.0 451 73.2
Phvul.011G187600 Phaseolus vulgaris HOM05D005149 ORTHO05D006251 4.9e-180 634.8 444 72.5
RcHm_v2.0_Chr1g0331361 Rosa chinensis HOM05D005149 ORTHO05D006251 6.4e-180 634.4 445 73.0
Lj3g0016494 Lotus japonicus HOM05D005149 ORTHO05D006251 8.4e-180 634.0 441 73.0
FvH4_7g05040 Fragaria vesca HOM05D005149 ORTHO05D006251 2.4e-179 632.5 445 72.6
Gorai.006G271200 Gossypium raimondii HOM05D005149 ORTHO05D006251 2.4e-179 632.5 454 72.5
Medtr8g044150 Medicago truncatula HOM05D005149 ORTHO05D006251 2.1e-178 629.4 440 73.2
Gohir.D09G246700 Gossypium hirsutum HOM05D005149 ORTHO05D006251 6.0e-178 627.9 454 72.2
Ca_12171_v3 Cicer arietinum L. HOM05D005149 ORTHO05D006251 1.0e-177 627.1 445 72.6
Ciclev10015236m.g Citrus clementina HOM05D005149 ORTHO05D006251 1.0e-177 627.1 451 71.6
FAN17G1198 Fragaria x ananassa HOM05D005149 ORTHO05D006251 5.1e-177 624.8 445 72.6
FAN12G0991 Fragaria x ananassa HOM05D005149 ORTHO05D006251 8.7e-177 624.0 445 72.1
CsaV3_6G035780 Cucumis sativus L. HOM05D005149 ORTHO05D006251 1.1e-176 623.6 437 71.4
TWI38G0882 Tripterygium wilfordii HOM05D005149 ORTHO05D006251 1.1e-176 623.6 442 71.3
FAN03G2277 Fragaria x ananassa HOM05D005149 ORTHO05D006251 1.9e-176 622.9 445 71.9
Sed0022214 Sechium edule HOM05D005149 ORTHO05D006251 2.5e-176 622.5 432 72.0
arahy.Tifrunner.gnm1.ann1.PFS9H6 Arachis hypogaea HOM05D005149 ORTHO05D006251 9.6e-176 620.5 461 69.2
arahy.Tifrunner.gnm1.ann1.Q8TWNW Arachis hypogaea HOM05D005149 ORTHO05D006251 9.6e-176 620.5 461 69.2
MELO3C011385.2 Cucumis melo HOM05D005149 ORTHO05D006251 2.8e-175 619.0 435 70.8
CSS0030945 Camellia sinensis var. sinensis HOM05D005149 ORTHO05D006251 8.1e-175 617.5 444 72.7
Cfa010450 Carpinus fangiana HOM05D005149 ORTHO05D006251 1.1e-174 617.1 446 72.2
Glyma.08G228000 Glycine max HOM05D005149 ORTHO05D006251 1.1e-174 617.1 441 72.3
MD07G1054600 Malus domestica HOM05D005149 ORTHO05D006251 5.8e-173 611.3 428 73.8
Atru.chr12.1229 Acer truncatum HOM05D005149 ORTHO05D006251 2.2e-172 609.4 436 72.2
FAN12G2325 Fragaria x ananassa HOM05D005149 ORTHO05D006251 2.2e-172 609.4 454 70.5
FAN07G2641 Fragaria x ananassa HOM05D005149 ORTHO05D006251 7.1e-171 604.4 445 71.2
FvH4_4g11870 Fragaria vesca HOM05D005149 ORTHO05D006251 3.5e-170 602.1 445 70.6
Lalb_Chr03g0032361 Lupinus albus HOM05D005149 ORTHO05D006251 3.5e-170 602.1 443 70.4
MSTRG.5085 Avicennia marina HOM05D005149 ORTHO05D006251 1.5e-168 596.7 454 67.4
TAR633G2177 Trochodendron aralioides HOM05D005149 ORTHO05D006251 3.7e-167 592.0 438 68.9
Carub.0006s0386 Capsella rubella HOM05D005149 ORTHO05D006251 8.2e-167 590.9 437 69.1
PGR142G4466 Punica granatum HOM05D005149 ORTHO05D006251 1.4e-166 590.1 446 69.5
THA.LOC104816483 Tarenaya hassleriana HOM05D005149 ORTHO05D006251 1.8e-166 589.7 431 71.5
Hma1.2p1_0327F.1_g126330 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 6.9e-166 587.8 427 71.2
AL6G14620 Arabidopsis lyrata HOM05D005149 ORTHO05D006251 2.0e-165 586.3 435 68.7
Lalb_Chr19g0132531 Lupinus albus HOM05D005149 ORTHO05D006251 2.6e-165 585.9 436 70.4
AT5G04920 Arabidopsis thaliana HOM05D005149 ORTHO05D006251 4.5e-165 585.1 437 68.0
Migut.N01878 Erythranthe guttata HOM05D005149 ORTHO05D006251 4.5e-165 585.1 443 68.4
Thhalv10013568m.g Eutrema salsugineum HOM05D005149 ORTHO05D006251 5.8e-165 584.7 437 69.1
Sp6g37880 Schrenkiella parvula HOM05D005149 ORTHO05D006251 5.8e-165 584.7 437 68.2
Aa31LG11G5780 Aethionema arabicum HOM05D005149 ORTHO05D006251 2.9e-164 582.4 433 68.8
Actinidia17467 Actinidia chinensis HOM05D005149 ORTHO05D006251 6.5e-164 581.3 447 68.5
Carub.0010s0002 Capsella rubella HOM05D005149 ORTHO05D006251 1.9e-163 579.7 437 68.0
PGSC0003DMG400027500 Solanum tuberosum HOM05D005149 ORTHO05D006251 1.9e-163 579.7 437 67.3
Hund06827 Selenicereus undatus HOM05D005149 ORTHO05D006251 4.2e-163 578.6 448 68.1
A10p31210 Brassica napus HOM05D005149 ORTHO05D006251 3.5e-162 575.5 440 68.2
PSO339G6394 Papaver somniferum HOM05D005149 ORTHO05D006251 3.5e-162 575.5 451 65.4
CARHR208340 Cardamine hirsuta HOM05D005149 ORTHO05D006251 1.3e-161 573.5 437 68.0
BolC9t59932H Brassica oleracea HOM05D005149 ORTHO05D006251 1.8e-161 573.2 436 68.1
Oeu058668.1 Olea europaea HOM05D005149 ORTHO05D006251 1.8e-161 573.2 426 70.4
Sopen01g040620 Solanum pennellii HOM05D005149 ORTHO05D006251 1.8e-161 573.2 441 66.4
HanXRQChr06g0174201 Helianthus annuus HOM05D005149 ORTHO05D006251 2.3e-161 572.8 447 67.1
BraA10t45165Z Brassica rapa HOM05D005149 ORTHO05D006251 3.9e-161 572.0 437 68.2
MBI19_g30303_MAGBIO Magnolia biondii HOM05D005149 ORTHO05D006251 8.7e-161 570.9 448 67.4
ECA246G4563 Erigeron canadensis HOM05D005149 ORTHO05D006251 1.1e-160 570.5 441 65.8
Aqoxy1G01331 Aquilegia oxysepala HOM05D005149 ORTHO05D006251 2.5e-160 569.3 443 68.2
EL10Ac4g08774 Beta vulgaris HOM05D005149 ORTHO05D006251 2.5e-160 569.3 436 68.1
C09p71830 Brassica napus HOM05D005149 ORTHO05D006251 2.5e-160 569.3 436 67.9
Solyc01g096910.3 Solanum lycopersicum HOM05D005149 ORTHO05D006251 2.5e-160 569.3 441 66.0
Sc09g0004900 Simmondsia chinensis HOM05D005149 ORTHO05D006251 1.0e-156 557.4 447 66.7
FAN01G0635 Fragaria x ananassa HOM05D005149 ORTHO05D006251 3.8e-156 555.4 450 64.7
Ah.04g162660 Amaranthus hybridus HOM05D005149 ORTHO05D006251 2.7e-154 549.3 438 65.3
vmacro20844 Vaccinium macrocarpon HOM05D005149 ORTHO05D006251 7.4e-152 541.2 443 66.4
Lj7C543G12 Lonicera japonica HOM05D005149 ORTHO05D006251 1.3e-151 540.4 504 61.5
BcaC06g32201 Brassica carinata HOM05D005149 ORTHO05D006251 1.7e-151 540.0 442 64.9
Eucgr.G02641 Eucalyptus grandis HOM05D005149 ORTHO05D006251 4.8e-151 538.5 404 69.1
SHI21243 Sapria himalayana HOM05D005149 ORTHO05D006251 6.3e-151 538.1 415 67.0
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 4.5e-149 531.9 415 65.8
Dinv24594 Davidia involucrata HOM05D005149 ORTHO05D006251 2.9e-148 529.3 449 64.1
AUR62014307 Chenopodium quinoa HOM05D005149 ORTHO05D006251 1.9e-147 526.6 451 63.9
Sed0016259 Sechium edule HOM05D005149 ORTHO05D006251 2.7e-146 522.7 450 63.1
SGA_v2.0_scaffold196G40993 Striga asiatica HOM05D005149 ORTHO05D006251 4.7e-146 521.9 532 55.6
DCAR_023093 Daucus carota HOM05D005149 ORTHO05D006251 1.0e-145 520.8 401 70.6
Peaxi162Scf00647g00319 Petunia axillaris HOM05D005149 ORTHO05D006251 2.6e-144 516.2 423 66.0
HPP92_019772 Vanilla planifolia HOM05D005149 ORTHO05D006251 3.3e-144 515.8 449 60.6
SalBow4G1949 Salvia bowleyana HOM05D005149 ORTHO05D006251 4.8e-143 511.9 461 62.3
unitig_749.g13551 Utricularia gibba HOM05D005149 ORTHO05D006251 4.8e-143 511.9 443 61.4
Prupe.2G061300 Prunus persica HOM05D005149 ORTHO05D006251 1.5e-139 500.4 444 60.8
AUR62034100 Chenopodium quinoa HOM05D005149 ORTHO05D006251 3.2e-139 499.2 439 62.6
Lsat_1_v5_gn_3_25820 Lactuca sativa HOM05D005149 ORTHO05D006251 4.4e-136 488.8 411 65.7
CDE04G0393 Ceratophyllum demersum HOM05D005149 ORTHO05D006251 9.7e-136 487.6 439 59.5
Os01g0813500 Oryza sativa ssp. japonica HOM05D005149 ORTHO05D006251 2.9e-132 476.1 453 56.3
CAN.G134.53 Capsicum annuum HOM05D005149 ORTHO05D006251 1.2e-130 470.7 351 69.5
TPR.G35740 Trifolium pratense HOM05D005149 ORTHO05D006251 2.7e-130 469.5 270 85.2
Duzib106G0431 Durio zibethinus HOM05D005149 ORTHO05D006251 8.3e-127 458.0 452 57.7
Zm00001eb149970 Zea mays HOM05D005149 ORTHO05D006251 3.5e-125 452.6 445 55.5
Nn2g14694 Nelumbo nucifera HOM05D005149 ORTHO05D006251 8.0e-122 441.4 350 67.1
GSVIVG01010707001 Vitis vinifera HOM05D005149 ORTHO05D006251 2.6e-120 436.4 267 81.3
Mapoly0072s0023 Marchantia polymorpha HOM05D005149 ORTHO05D006251 2.8e-119 433.0 428 53.7
Cc02_g32050 Coffea canephora HOM05D005149 ORTHO05D006251 1.3e-116 424.1 246 82.9
GSVIVG01027217001 Vitis vinifera HOM05D005149 ORTHO05D006251 1.9e-115 420.2 252 82.5
Nitab4.5_0005056g0010 Nicotiana tabacum HOM05D005149 ORTHO05D006251 5.7e-112 408.7 416 55.0
Pp3c23_21630 Physcomitrium patens HOM05D005149 ORTHO05D006251 2.8e-111 406.4 424 53.8
Zm00001eb369140 Zea mays HOM05D005149 ORTHO05D006251 1.1e-110 404.4 333 63.4
AagrBONN_evm.TU.Sc2ySwM_369.549 Anthoceros agrestis HOM05D005149 ORTHO05D006251 6.1e-106 388.7 401 52.4
Hma1.2p1_0327F.1_g126340 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 5.8e-104 382.1 227 82.4
Gohir.D13G182000 Gossypium hirsutum HOM05D005149 ORTHO05D006251 1.1e-102 377.9 311 66.9
SMO011G0007 Selaginella moellendorffii HOM05D005149 ORTHO05D006251 2.0e-101 373.6 407 51.8
Sabra08G0007600 Salix brachista HOM05D005149 ORTHO05D006251 2.7e-101 373.2 358 58.4
CBR_g40666 Chara braunii HOM05D005149 ORTHO05D006251 2.4e-94 350.1 485 43.7
ClCG08G010780 Citrullus lanatus HOM05D005149 ORTHO05D006251 3.2e-94 349.7 274 65.0
VMungo1127G0494 Vigna mungo HOM05D005149 ORTHO05D006251 4.7e-90 335.9 317 60.6
Rhsim01G0121200 Rhododendron simsii HOM05D005149 ORTHO05D006251 3.9e-76 289.7 288 61.8
ATR0068G114 Amborella trichopoda HOM05D005149 ORTHO05D006251 4.9e-71 272.7 288 55.6
Nn2g14693 Nelumbo nucifera HOM05D005149 ORTHO05D006251 3.5e-69 266.5 242 57.4
SEGI_09620 Sequoiadendron giganteum HOM05D005149 ORTHO05D006251 1.6e-66 257.7 288 51.0
CAN.G134.55 Capsicum annuum HOM05D005149 ORTHO05D006251 2.4e-65 253.8 247 57.9
Cpa.g.sc54.64 Carica papaya HOM05D005149 ORTHO05D006251 3.5e-61 240.0 210 61.9
MCO16G624 Micromonas commoda HOM05D005149 ORTHO05D006251 8.7e-60 235.3 427 35.6
Cpa.g.sc54.66 Carica papaya HOM05D005149 ORTHO05D006251 2.4e-57 227.3 203 59.6
CDE02G4629 Ceratophyllum demersum HOM05D005149 ORTHO05D006251 6.9e-57 225.7 394 40.1
Hma1.2p1_0327F.1_g126320 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 1.3e-55 221.5 214 56.5
Cre03.g159750 Chlamydomonas reinhardtii HOM05D005149 ORTHO05D006251 1.3e-52 211.5 258 46.5
SEGI_10345 Sequoiadendron giganteum HOM05D005149 ORTHO05D006251 6.5e-47 192.6 136 65.4
PRCOL_00005700 Prasinoderma coloniale HOM05D005149 ORTHO05D006251 2.1e-45 187.6 255 42.4
Gorai.013G207600 Gossypium raimondii HOM05D005149 ORTHO05D006251 3.3e-43 180.3 106 86.8
Glyma.15G221000 Glycine max HOM05D005149 ORTHO05D006251 1.2e-40 171.8 98 88.8
Cpa.g.c41130 Carica papaya HOM05D005149 ORTHO05D006251 2.0e-40 171.0 86 93.0
Migut.O00436 Erythranthe guttata HOM05D005149 ORTHO05D006251 7.9e-37 159.1 165 53.3
COL.COLO4_28905 Corchorus olitorius HOM05D005149 ORTHO05D006251 4.5e-32 143.3 89 73.0
VMungo1127G1160 Vigna mungo HOM05D005149 ORTHO05D000001 2.9e-31 140.6 74 87.8
MD12G1098600 Malus domestica HOM05D005149 ORTHO05D006251 2.7e-29 134.0 86 77.9
ATR0068G025 Amborella trichopoda HOM05D005149 ORTHO05D006251 9.7e-27 125.6 87 63.2
Cfa024879 Carpinus fangiana HOM05D005149 ORTHO05D006251 2.8e-26 124.0 273 31.5
BcaB04g17834 Brassica carinata HOM05D005149 ORTHO05D017514 1.2e-21 108.6 98 60.2
arahy.Tifrunner.gnm1.ann1.UR2VUR Arachis hypogaea HOM05D005149 ORTHO05D006251 4.0e-20 103.6 67 71.6
AagrBONN_evm.TU.Sc2ySwM_369.516 Anthoceros agrestis HOM05D005149 ORTHO05D006251 9.7e-19 99.0 188 38.8
BolC2t06178H Brassica oleracea HOM05D005149 ORTHO05D006251 3.7e-18 97.1 69 73.9
BcaC03g13138 Brassica carinata HOM05D005149 ORTHO05D006251 3.8e-15 87.0 80 62.5
MBI14_g16397_MAGBIO Magnolia biondii HOM05D005149 ORTHO05D006251 2.5e-14 84.3 61 63.9
Rhsim04G0076600 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.7e-13 80.9 59 66.1
AagrBONN_evm.TU.Sc2ySwM_117.426 Anthoceros agrestis HOM05D005149 ORTHO05D006251 6.1e-13 79.7 188 34.0
BcaB01g02418 Brassica carinata HOM05D005149 ORTHO05D006251 9.8e-11 72.4 73 52.1
Gorai.004G275700 Gossypium raimondii HOM05D005149 ORTHO05D006251 5.4e-09 66.6 81 46.9
TWI15G0704 Tripterygium wilfordii HOM05D005149 ORTHO05D006251 2.0e-08 64.7 44 72.7
arahy.Tifrunner.gnm1.ann1.638LQB Arachis hypogaea HOM05D000561 ORTHO05D000514 1.1e-06 58.9 36 75.0


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