Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI15_g41903_MAGBIO Magnolia biondii HOM05D001061 ORTHO05D006729 4.4e-29 130.6 64 100.0
MBI18_g09768_MAGBIO Magnolia biondii HOM05D001061 ORTHO05D006729 2.2e-20 101.7 51 92.2
TAR636G1260 Trochodendron aralioides HOM05D001061 ORTHO05D006729 4.1e-19 97.4 51 86.3
GSVIVG01010538001 Vitis vinifera HOM05D001061 ORTHO05D006729 7.0e-19 96.7 51 82.4
VMungo0720G3063 Vigna mungo HOM05D001061 ORTHO05D006729 1.2e-18 95.9 51 82.4
Cfa008311 Carpinus fangiana HOM05D001061 ORTHO05D006729 2.0e-18 95.1 51 82.4
Haze_13724 Corylus avellana HOM05D001061 ORTHO05D006729 2.0e-18 95.1 51 82.4
Carub.0007s1544 Capsella rubella HOM05D001061 ORTHO05D006729 2.7e-18 94.7 51 82.4
Cc02_g03080 Coffea canephora HOM05D001061 ORTHO05D006729 2.7e-18 94.7 51 80.4
Oeu022585.1 Olea europaea HOM05D001061 ORTHO05D006729 2.7e-18 94.7 51 80.4
Phvul.007G069100 Phaseolus vulgaris HOM05D001061 ORTHO05D006729 2.7e-18 94.7 51 80.4
Sabra15G0152800 Salix brachista HOM05D007457 ORTHO05D006729 3.5e-18 94.4 53 81.1
Actinidia34106 Actinidia chinensis HOM05D001061 ORTHO05D006729 4.6e-18 94.0 51 80.4
CARHR232960 Cardamine hirsuta HOM05D001061 ORTHO05D006729 4.6e-18 94.0 51 82.4
Dinv28450 Davidia involucrata HOM05D001061 ORTHO05D006729 4.6e-18 94.0 51 78.4
ATR0680G072 Amborella trichopoda HOM05D001061 ORTHO05D006729 5.9e-18 93.6 51 82.4
CSS0048539 Camellia sinensis var. sinensis HOM05D001061 ORTHO05D006729 5.9e-18 93.6 51 78.4
CDE11G1074 Ceratophyllum demersum HOM05D001061 ORTHO05D006729 5.9e-18 93.6 53 75.5
Lsat_1_v5_gn_8_8260 Lactuca sativa HOM05D001061 ORTHO05D006729 7.8e-18 93.2 60 68.3
Lj1A996G55 Lonicera japonica HOM05D001061 ORTHO05D006729 7.8e-18 93.2 51 78.4
SGA_v2.0_scaffold44G16715 Striga asiatica HOM05D001061 ORTHO05D006729 7.8e-18 93.2 51 78.4
Aa31sc165G10 Aethionema arabicum HOM05D001061 ORTHO05D006729 1.0e-17 92.8 51 80.4
BcaC06g32803 Brassica carinata HOM05D001061 ORTHO05D006729 1.0e-17 92.8 51 80.4
A03p56070 Brassica napus HOM05D001061 ORTHO05D006729 1.0e-17 92.8 51 80.4
C07p54390 Brassica napus HOM05D001061 ORTHO05D006729 1.0e-17 92.8 51 80.4
BolC7t45925H Brassica oleracea HOM05D001061 ORTHO05D006729 1.0e-17 92.8 51 80.4
Glyma.20G157600 Glycine max HOM05D001061 ORTHO05D006729 1.0e-17 92.8 51 78.4
Sed0018541 Sechium edule HOM05D001061 ORTHO05D006729 1.0e-17 92.8 51 82.4
ECA233G1964 Erigeron canadensis HOM05D001061 ORTHO05D009717 1.3e-17 92.4 51 78.4
Migut.F00349 Erythranthe guttata HOM05D001061 ORTHO05D006729 1.3e-17 92.4 51 80.4
MD07G1267600 Malus domestica HOM05D001061 ORTHO05D006729 1.3e-17 92.4 51 82.4
AL7G27560 Arabidopsis lyrata HOM05D001061 ORTHO05D006729 1.7e-17 92.0 51 78.4
Hma1.2p1_2482F.1_g322970 Hydrangea macrophylla HOM05D001061 ORTHO05D006729 1.7e-17 92.0 51 78.4
Hma1.2p1_2482F.1_g322980 Hydrangea macrophylla HOM05D001061 ORTHO05D006729 1.7e-17 92.0 50 80.0
Nn1g01435 Nelumbo nucifera HOM05D001061 ORTHO05D006729 1.7e-17 92.0 51 78.4
Sp7g23570 Schrenkiella parvula HOM05D001061 ORTHO05D006729 1.7e-17 92.0 51 78.4
TWI23G0875 Tripterygium wilfordii HOM05D001061 ORTHO05D006729 1.7e-17 92.0 51 80.4
HanXRQChr05g0141231 Helianthus annuus HOM05D001061 ORTHO05D006729 2.3e-17 91.7 51 76.5
Lalb_Chr06g0161081 Lupinus albus HOM05D001061 ORTHO05D006729 2.3e-17 91.7 51 80.4
AT4G25540 Arabidopsis thaliana HOM05D001061 ORTHO05D006729 3.0e-17 91.3 51 80.4
Cpa.g.sc107.43 Carica papaya HOM05D001061 ORTHO05D006729 3.0e-17 91.3 51 80.4
Lj5g0016766 Lotus japonicus HOM05D001061 ORTHO05D006729 3.0e-17 91.3 50 80.0
arahy.Tifrunner.gnm1.ann1.353VBZ Arachis hypogaea HOM05D001061 ORTHO05D006729 3.9e-17 90.9 51 78.4
FAN06G1288 Fragaria x ananassa HOM05D002077 ORTHO05D006729 3.9e-17 90.9 53 77.4
FAN06G1718 Fragaria x ananassa HOM05D002077 ORTHO05D006729 3.9e-17 90.9 53 77.4
PSO675G8279 Papaver somniferum HOM05D001061 ORTHO05D006729 3.9e-17 90.9 51 80.4
QL09p014380 Quercus lobata HOM05D001061 ORTHO05D006729 3.9e-17 90.9 51 78.4
QL10p004648 Quercus lobata HOM05D001829 ORTHO05D005036 3.9e-17 90.9 50 80.0
FvH4_7g29360 Fragaria vesca HOM05D001061 ORTHO05D006729 5.0e-17 90.5 51 80.4
FAN03G0437 Fragaria x ananassa HOM05D001061 ORTHO05D006729 5.0e-17 90.5 51 80.4
FAN03G1828 Fragaria x ananassa HOM05D002077 ORTHO05D006729 5.0e-17 90.5 51 80.4
FAN10G0894 Fragaria x ananassa HOM05D001061 ORTHO05D006729 5.0e-17 90.5 51 80.4
RcHm_v2.0_Chr1g0377121 Rosa chinensis HOM05D001061 ORTHO05D006729 5.0e-17 90.5 51 80.4
Zm00001eb434000 Zea mays HOM05D001061 ORTHO05D006729 6.6e-17 90.1 51 78.4
Atru.chr1.472 Acer truncatum HOM05D001061 ORTHO05D006729 8.6e-17 89.7 51 76.5
BraA03t14678Z Brassica rapa HOM05D001061 ORTHO05D006729 8.6e-17 89.7 51 78.4
Eucgr.L01884 Eucalyptus grandis HOM05D001061 ORTHO05D006729 8.6e-17 89.7 51 80.4
Gohir.A12G258300 Gossypium hirsutum HOM05D001061 ORTHO05D006729 8.6e-17 89.7 51 80.4
Gohir.D12G259600 Gossypium hirsutum HOM05D001061 ORTHO05D006729 8.6e-17 89.7 51 80.4
Gorai.008G278000 Gossypium raimondii HOM05D001061 ORTHO05D006729 8.6e-17 89.7 51 80.4
Nitab4.5_0003365g0010 Nicotiana tabacum HOM05D001061 ORTHO05D006729 8.6e-17 89.7 51 78.4
Rhsim03G0180100 Rhododendron simsii HOM05D001061 ORTHO05D006729 8.6e-17 89.7 51 76.5
Aqoxy7G00378 Aquilegia oxysepala HOM05D001061 ORTHO05D006729 1.1e-16 89.4 51 76.5
Solyc03g025890.2 Solanum lycopersicum HOM05D001061 ORTHO05D006729 1.1e-16 89.4 51 76.5
Sopen03g004700 Solanum pennellii HOM05D001061 ORTHO05D006729 1.1e-16 89.4 51 76.5
HPP92_020859 Vanilla planifolia HOM05D001061 ORTHO05D006729 1.1e-16 89.4 51 80.4
Manes.14G026600 Manihot esculenta HOM05D001061 ORTHO05D006729 1.5e-16 89.0 51 76.5
Potri.015G142900 Populus trichocarpa HOM05D001061 ORTHO05D006729 1.5e-16 89.0 51 80.4
vmacro06688 Vaccinium macrocarpon HOM05D001061 ORTHO05D006729 1.5e-16 89.0 51 74.5
Nitab4.5_0000716g0140 Nicotiana tabacum HOM05D001061 ORTHO05D006729 1.9e-16 88.6 51 76.5
THA.LOC104811986 Tarenaya hassleriana HOM05D001061 ORTHO05D006729 1.9e-16 88.6 51 74.5
Peaxi162Scf01452g00006 Petunia axillaris HOM05D001061 ORTHO05D006729 2.5e-16 88.2 51 74.5
PGR142G2564 Punica granatum HOM05D001061 ORTHO05D006729 2.5e-16 88.2 51 76.5
Medtr1g100683 Medicago truncatula HOM05D001061 ORTHO05D006729 3.3e-16 87.8 51 74.5
TPR.G14330 Trifolium pratense HOM05D001061 ORTHO05D006729 3.3e-16 87.8 51 74.5
CAN.G913.1 Capsicum annuum HOM05D001061 ORTHO05D006729 4.3e-16 87.4 51 74.5
Ciclev10004302m.g Citrus clementina HOM05D001061 ORTHO05D006729 4.3e-16 87.4 50 78.0
Prupe.2G293300 Prunus persica HOM05D001061 ORTHO05D006729 4.3e-16 87.4 51 78.4
SalBow4G2537 Salvia bowleyana HOM05D001061 ORTHO05D006729 4.3e-16 87.4 51 72.5
Sc25g0000470 Simmondsia chinensis HOM05D001061 ORTHO05D006729 4.3e-16 87.4 51 76.5
EL10Ac3g05663 Beta vulgaris HOM05D001061 ORTHO05D006729 5.6e-16 87.0 51 76.5
COL.COLO4_14300 Corchorus olitorius HOM05D001061 ORTHO05D006729 5.6e-16 87.0 51 76.5
Duzib205G0347 Durio zibethinus HOM05D001061 ORTHO05D006729 7.3e-16 86.7 51 76.5
Ca_10778_v3 Cicer arietinum L. HOM05D001061 ORTHO05D006729 9.5e-16 86.3 51 74.5
Thecc.03G175500 Theobroma cacao HOM05D001061 ORTHO05D006729 9.5e-16 86.3 51 78.4
CANSAT21G0044 Cannabis sativa HOM05D001061 ORTHO05D006729 1.6e-15 85.5 51 72.5
AUR62015994 Chenopodium quinoa HOM05D001061 ORTHO05D006729 1.6e-15 85.5 50 76.0
AUR62021201 Chenopodium quinoa HOM05D001061 ORTHO05D006729 1.6e-15 85.5 51 74.5
Psat6g199840 Pisum sativum HOM05D001061 ORTHO05D006729 2.1e-15 85.1 51 74.5
TAR636G0046 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.1e-15 85.1 42 88.1
unitig_46.g18782 Utricularia gibba HOM05D001061 ORTHO05D006729 2.1e-15 85.1 51 72.5
Ah.07g207270 Amaranthus hybridus HOM05D001061 ORTHO05D006729 2.8e-15 84.7 51 74.5
ClCG05G007980 Citrullus lanatus HOM05D001061 ORTHO05D006729 3.6e-15 84.3 51 74.5
MELO3C006901.2 Cucumis melo HOM05D001061 ORTHO05D006729 4.7e-15 84.0 51 74.5
CsaV3_3G017020 Cucumis sativus L. HOM05D001061 ORTHO05D006729 4.7e-15 84.0 51 74.5
Mapoly0043s0063 Marchantia polymorpha HOM05D001061 ORTHO05D006729 4.7e-15 84.0 51 76.5
SHI13790 Sapria himalayana HOM05D001061 ORTHO05D006729 1.4e-14 82.4 50 70.0
Thhalv10024274m.g Eutrema salsugineum HOM05D001061 ORTHO05D006729 1.8e-14 82.0 51 74.5
Hund11753 Selenicereus undatus HOM05D001061 ORTHO05D006729 3.1e-14 81.3 51 76.5
SEGI_11976 Sequoiadendron giganteum HOM05D001061 ORTHO05D006729 5.2e-14 80.5 51 74.5
CBR_g38458 Chara braunii HOM05D001061 ORTHO05D006729 2.0e-13 78.6 51 72.5
Pp3c2_16220 Physcomitrium patens HOM05D001061 ORTHO05D006729 3.4e-13 77.8 51 70.6
Pp3c2_16228 Physcomitrium patens HOM05D001061 ORTHO05D006729 3.4e-13 77.8 51 70.6
SMO195G0055 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 4.9e-12 73.9 53 66.0
SMO116G0252 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 8.3e-12 73.2 51 68.6
SMO195G0039 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 8.3e-12 73.2 51 68.6
SMO195G0022 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 9.2e-11 69.7 53 62.3
SMO195G0034 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 1.6e-10 68.9 51 64.7
SMO195G0050 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 1.6e-10 68.9 51 64.7
Glyma.10G236802 Glycine max HOM05D001061 ORTHO05D006729 6.6e-09 63.5 35 77.1
MCO07G196 Micromonas commoda HOM05D001061 ORTHO05D006729 2.8e-07 58.2 51 54.9
Peaxi162Scf00081g02227 Petunia axillaris HOM05D002283 ORTHO05D008228 1.8e-06 55.5 45 55.6
SGA_v2.0_scaffold19G08803 Striga asiatica HOM05D001061 ORTHO05D006881 1.8e-06 55.5 43 58.1
Actinidia35358 Actinidia chinensis HOM05D004988 ORTHO05D005845 5.2e-06 53.9 51 49.0
Solyc10g018530.2 Solanum lycopersicum HOM05D004988 ORTHO05D005845 5.2e-06 53.9 51 49.0
Sopen10g008290 Solanum pennellii HOM05D004988 ORTHO05D005845 5.2e-06 53.9 51 49.0
Aa31LG8G5400 Aethionema arabicum HOM05D001061 ORTHO05D006881 6.8e-06 53.5 43 55.8
vmacro09701 Vaccinium macrocarpon HOM05D004988 ORTHO05D005845 8.9e-06 53.1 51 47.1


User provided reference genes

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