Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI10_g00722_MAGBIO Magnolia biondii HOM05D005565 ORTHO05D006950 3.6e-193 678.3 408 100.0
TAR626G1362 Trochodendron aralioides HOM05D005565 ORTHO05D006950 5.1e-155 551.6 390 83.8
Nn3g20239 Nelumbo nucifera HOM05D005565 ORTHO05D006950 2.4e-152 542.7 390 84.1
Aqoxy1G01543 Aquilegia oxysepala HOM05D005565 ORTHO05D006950 2.0e-143 513.1 399 76.9
HPP92_019891 Vanilla planifolia HOM05D005565 ORTHO05D006950 2.4e-136 489.6 389 78.7
PSO541G0264 Papaver somniferum HOM05D005565 ORTHO05D006950 5.3e-136 488.4 402 80.6
Dinv06439 Davidia involucrata HOM05D005565 ORTHO05D006950 3.4e-135 485.7 389 77.4
PSO675G3222 Papaver somniferum HOM05D005565 ORTHO05D006950 3.4e-135 485.7 402 78.9
Prupe.4G089800 Prunus persica HOM05D005565 ORTHO05D006950 3.4e-135 485.7 392 77.0
Lj1A1162G46 Lonicera japonica HOM05D005565 ORTHO05D006950 1.1e-133 480.7 390 77.7
RcHm_v2.0_Chr5g0015891 Rosa chinensis HOM05D005565 ORTHO05D006950 3.2e-133 479.2 391 75.7
MD05G1274000 Malus domestica HOM05D005565 ORTHO05D006950 2.7e-132 476.1 393 74.3
QL05p061027 Quercus lobata HOM05D005565 ORTHO05D006950 3.0e-131 472.6 394 74.4
Cfa000824 Carpinus fangiana HOM05D005565 ORTHO05D006950 1.1e-130 470.7 389 74.8
FAN21G3355 Fragaria x ananassa HOM05D005565 ORTHO05D006950 1.5e-130 470.3 391 74.9
CiPaw.10G085900 Carya illinoinensis HOM05D005565 ORTHO05D006950 2.5e-130 469.5 391 75.7
TWI53G0754 Tripterygium wilfordii HOM05D005565 ORTHO05D006950 4.3e-130 468.8 396 78.3
Cpa.g.sc17.91 Carica papaya HOM05D005565 ORTHO05D006950 7.4e-130 468.0 392 76.3
FAN11G0475 Fragaria x ananassa HOM05D005565 ORTHO05D006950 7.4e-130 468.0 391 74.9
VMungo0251G3128 Vigna mungo HOM05D005565 ORTHO05D006950 9.7e-130 467.6 391 75.2
FvH4_3g10030 Fragaria vesca HOM05D005565 ORTHO05D006950 4.8e-129 465.3 391 74.7
Atru.chr10.872 Acer truncatum HOM05D005565 ORTHO05D006950 6.3e-129 464.9 392 77.8
FAN16G1178 Fragaria x ananassa HOM05D005565 ORTHO05D006950 8.2e-129 464.5 396 74.5
Duzib192G0128 Durio zibethinus HOM05D005565 ORTHO05D006950 1.8e-128 463.4 396 75.8
Aa31LG6G11740 Aethionema arabicum HOM05D005565 ORTHO05D006950 5.3e-128 461.8 389 76.6
Gohir.A10G003700 Gossypium hirsutum HOM05D005565 ORTHO05D006950 5.3e-128 461.8 394 75.4
Thecc.06G001100 Theobroma cacao HOM05D005565 ORTHO05D006950 5.3e-128 461.8 390 75.4
CANSAT35G0106 Cannabis sativa HOM05D005565 ORTHO05D006950 1.5e-127 460.3 389 73.3
Actinidia13472 Actinidia chinensis HOM05D005565 ORTHO05D006950 3.4e-127 459.1 389 72.2
Gorai.011G004100 Gossypium raimondii HOM05D005565 ORTHO05D006950 4.5e-127 458.8 394 75.1
Glyma.07G224200 Glycine max HOM05D005565 ORTHO05D006950 7.7e-127 458.0 392 74.0
CsaV3_6G052300 Cucumis sativus L. HOM05D005565 ORTHO05D006950 6.5e-126 454.9 389 74.3
Medtr4g083380 Medicago truncatula HOM05D005565 ORTHO05D006950 1.4e-125 453.8 396 72.7
THA.LOC104812687 Tarenaya hassleriana HOM05D005565 ORTHO05D006950 1.9e-125 453.4 389 75.1
ClCG01G025100 Citrullus lanatus HOM05D005565 ORTHO05D006950 1.2e-124 450.7 394 72.3
Sc17g0004650 Simmondsia chinensis HOM05D005565 ORTHO05D006950 2.7e-124 449.5 404 70.0
Zm00001eb315350 Zea mays HOM05D005565 ORTHO05D006950 2.7e-124 449.5 390 70.3
CSS0026797 Camellia sinensis var. sinensis HOM05D005565 ORTHO05D006950 4.6e-124 448.7 397 76.8
CANSAT35G0536 Cannabis sativa HOM05D005565 ORTHO05D006950 7.9e-124 448.0 390 72.3
AT1G30480 Arabidopsis thaliana HOM05D005565 ORTHO05D006950 7.4e-122 441.4 393 70.5
Phvul.002G100900 Phaseolus vulgaris HOM05D005565 ORTHO05D006950 1.3e-121 440.7 391 71.1
PGR083G1318 Punica granatum HOM05D005565 ORTHO05D006950 2.2e-121 439.9 400 77.2
Zm00001eb376390 Zea mays HOM05D005565 ORTHO05D006950 2.8e-121 439.5 390 68.2
MELO3C007079.2 Cucumis melo HOM05D005565 ORTHO05D006950 6.3e-121 438.3 409 69.2
Ca_18788_v3 Cicer arietinum L. HOM05D005565 ORTHO05D006950 3.1e-120 436.0 392 64.0
Psat7g132960 Pisum sativum HOM05D005565 ORTHO05D006950 1.5e-119 433.7 456 63.6
Sabra11G0084800 Salix brachista HOM05D005565 ORTHO05D006950 4.5e-119 432.2 414 68.8
Sabra11G0091000 Salix brachista HOM05D005565 ORTHO05D006950 1.3e-118 430.6 414 68.6
MD10G1253700 Malus domestica HOM05D005565 ORTHO05D006950 2.9e-118 429.5 389 69.9
Sed0002078 Sechium edule HOM05D005565 ORTHO05D006950 3.8e-118 429.1 389 70.7
CARHR029890 Cardamine hirsuta HOM05D005565 ORTHO05D006950 5.0e-118 428.7 393 69.0
SHI20681 Sapria himalayana HOM05D005565 ORTHO05D006950 1.1e-117 427.6 389 68.1
Potri.001G372600 Populus trichocarpa HOM05D005565 ORTHO05D006950 1.4e-117 427.2 388 69.3
Sp1g26320 Schrenkiella parvula HOM05D005565 ORTHO05D006950 3.2e-117 426.0 390 70.5
Glyma.20G024100 Glycine max HOM05D005565 ORTHO05D006950 4.2e-117 425.6 397 69.3
Carub.0001s2870 Capsella rubella HOM05D005565 ORTHO05D006950 2.1e-116 423.3 391 70.3
Lj4g0020694 Lotus japonicus HOM05D005565 ORTHO05D006950 2.7e-116 422.9 399 68.7
Thhalv10007861m.g Eutrema salsugineum HOM05D005565 ORTHO05D006950 1.4e-115 420.6 399 71.7
Potri.011G098100 Populus trichocarpa HOM05D005565 ORTHO05D006950 1.4e-115 420.6 339 75.5
arahy.Tifrunner.gnm1.ann1.V3UUHR Arachis hypogaea HOM05D005565 ORTHO05D006950 3.9e-115 419.1 405 69.9
Manes.06G055100 Manihot esculenta HOM05D005565 ORTHO05D006950 3.9e-115 419.1 389 69.4
arahy.Tifrunner.gnm1.ann1.59WFQY Arachis hypogaea HOM05D005565 ORTHO05D006950 3.3e-114 416.0 405 69.6
SEGI_17605 Sequoiadendron giganteum HOM05D005565 ORTHO05D006950 5.7e-114 415.2 410 64.9
Lsat_1_v5_gn_1_117781 Lactuca sativa HOM05D005565 ORTHO05D006950 7.4e-114 414.8 397 70.3
COL.COLO4_26828 Corchorus olitorius HOM05D005565 ORTHO05D006950 2.8e-113 412.9 391 61.6
Manes.14G122600 Manihot esculenta HOM05D005565 ORTHO05D006950 3.7e-113 412.5 393 64.6
MBI18_g10581_MAGBIO Magnolia biondii HOM05D005565 ORTHO05D006950 8.2e-113 411.4 297 82.5
vmacro03395 Vaccinium macrocarpon HOM05D005565 ORTHO05D006950 1.4e-112 410.6 393 70.2
Hma1.2p1_0333F.1_g128300 Hydrangea macrophylla HOM05D005565 ORTHO05D006950 7.0e-112 408.3 404 70.5
DCAR_027864 Daucus carota HOM05D005565 ORTHO05D006950 3.5e-111 406.0 394 67.5
Rhsim13G0120300 Rhododendron simsii HOM05D005565 ORTHO05D006950 4.5e-111 405.6 390 71.0
Eucgr.D00186 Eucalyptus grandis HOM05D005565 ORTHO05D006950 7.7e-111 404.8 393 64.1
C03p76800 Brassica napus HOM05D005565 ORTHO05D006950 1.7e-110 403.7 392 66.6
Oeu041100.1 Olea europaea HOM05D005565 ORTHO05D006950 2.2e-110 403.3 396 71.5
ATR0165G027 Amborella trichopoda HOM05D005565 ORTHO05D006950 1.1e-109 401.0 407 70.8
A08p24410 Brassica napus HOM05D005565 ORTHO05D006950 1.1e-109 401.0 391 68.5
EL10Ac8g19576 Beta vulgaris HOM05D005565 ORTHO05D006950 7.2e-109 398.3 405 69.9
Mapoly0023s0048 Marchantia polymorpha HOM05D005565 ORTHO05D006950 1.6e-108 397.1 459 63.8
Sabra16G0245100 Salix brachista HOM05D005565 ORTHO05D006950 5.2e-107 392.1 449 59.5
MSTRG.14795 Avicennia marina HOM05D005565 ORTHO05D006950 2.6e-106 389.8 405 70.1
Os01g0526100 Oryza sativa ssp. japonica HOM05D005565 ORTHO05D006950 4.4e-106 389.0 309 71.8
unitig_21.g20207 Utricularia gibba HOM05D003481 ORTHO05D004001 1.3e-105 387.5 393 63.4
Cc09_g08070 Coffea canephora HOM05D005565 ORTHO05D006950 4.8e-105 385.6 405 67.2
CAN.G954.26 Capsicum annuum HOM05D005565 ORTHO05D006950 7.7e-103 378.3 394 67.0
AL1G44510 Arabidopsis lyrata HOM05D005565 ORTHO05D006950 6.5e-102 375.2 396 64.4
BcaNung05264 Brassica carinata HOM05D005565 ORTHO05D006950 2.3e-99 366.7 390 64.9
ECA240G3173 Erigeron canadensis HOM05D005565 ORTHO05D006950 2.3e-99 366.7 396 67.4
BolC3t19934H Brassica oleracea HOM05D005565 ORTHO05D006950 3.0e-99 366.3 389 65.0
Oeu015183.1 Olea europaea HOM05D005565 ORTHO05D006950 3.0e-99 366.3 392 66.8
A09p35980 Brassica napus HOM05D005565 ORTHO05D006950 8.8e-99 364.8 391 65.5
BraA09t39122Z Brassica rapa HOM05D005565 ORTHO05D006950 8.8e-99 364.8 391 65.5
HanXRQChr01g0003371 Helianthus annuus HOM05D005565 ORTHO05D006950 1.2e-98 364.4 410 57.6
BcaNung05265 Brassica carinata HOM05D005565 ORTHO05D006950 1.5e-98 364.0 359 60.2
SGA_v2.0_scaffold1G00240 Striga asiatica HOM05D005565 ORTHO05D006950 2.4e-96 356.7 398 65.6
Pp3c2_18610 Physcomitrium patens HOM05D005565 ORTHO05D006950 9.1e-96 354.8 426 59.9
Migut.H01333 Erythranthe guttata HOM05D005565 ORTHO05D006950 7.7e-95 351.7 396 64.9
Sopen02g018950 Solanum pennellii HOM05D005565 ORTHO05D006950 4.2e-93 345.9 412 59.5
Solyc02g069790.3 Solanum lycopersicum HOM05D005565 ORTHO05D006950 1.2e-92 344.4 407 59.5
PGSC0003DMG400021191 Solanum tuberosum HOM05D005565 ORTHO05D006950 1.2e-92 344.4 401 59.9
Peaxi162Scf00670g00348 Petunia axillaris HOM05D005565 ORTHO05D006950 3.6e-92 342.8 401 63.8
SGA_v2.0_scaffold223G42860 Striga asiatica HOM05D005565 ORTHO05D006950 3.6e-92 342.8 392 63.5
AagrBONN_evm.TU.Sc2ySwM_228.4814 Anthoceros agrestis HOM05D005565 ORTHO05D006950 2.0e-87 327.0 425 48.5
AUR62042519 Chenopodium quinoa HOM05D005565 ORTHO05D006950 7.7e-87 325.1 393 52.4
CBR_g29718 Chara braunii HOM05D005565 ORTHO05D006950 1.9e-85 320.5 463 54.6
Haze_05807 Corylus avellana HOM05D005565 ORTHO05D006950 2.6e-82 310.1 304 71.1
FAN25G2018 Fragaria x ananassa HOM05D005565 ORTHO05D006950 3.7e-81 306.2 180 87.8
GSVIVG01021628001 Vitis vinifera HOM05D005565 ORTHO05D006950 5.4e-80 302.4 164 92.1
Gohir.D10G003700 Gossypium hirsutum HOM05D005565 ORTHO05D006950 1.4e-75 287.7 303 70.3
BraA08t34396Z Brassica rapa HOM05D005565 ORTHO05D006950 9.8e-74 281.6 389 56.3
Nitab4.5_0004596g0030 Nicotiana tabacum HOM05D005565 ORTHO05D006950 4.9e-73 279.3 208 71.6
CDE10G1151 Ceratophyllum demersum HOM05D005565 ORTHO05D006950 8.6e-70 268.5 394 57.1
BcaB07g32657 Brassica carinata HOM05D005565 ORTHO05D006950 3.3e-69 266.5 166 81.3
C05p29480 Brassica napus HOM05D005565 ORTHO05D006950 3.3e-69 266.5 166 81.3
BolC5t31678H Brassica oleracea HOM05D005565 ORTHO05D006950 3.3e-69 266.5 166 81.3
CDE10G1222 Ceratophyllum demersum HOM05D005565 ORTHO05D006950 4.0e-67 259.6 143 90.9
Dinv23083 Davidia involucrata HOM05D005565 ORTHO05D006950 7.5e-66 255.4 297 67.3
SMO351G0200 Selaginella moellendorffii HOM05D005565 ORTHO05D006950 1.1e-64 251.5 306 55.6
vmacro03441 Vaccinium macrocarpon HOM05D005565 ORTHO05D006950 3.2e-64 250.0 175 77.1
BcaB07g32683 Brassica carinata HOM05D005565 ORTHO05D006950 9.2e-64 248.4 389 45.0
Lalb_Chr05g0219831 Lupinus albus HOM05D005565 ORTHO05D006950 3.2e-56 223.4 393 42.2
BcaC01g00198 Brassica carinata HOM05D005565 ORTHO05D006950 2.7e-55 220.3 140 79.3
Cre11.g467591 Chlamydomonas reinhardtii HOM05D005565 ORTHO05D006950 6.2e-44 182.6 504 34.5
MCO12G324 Micromonas commoda HOM05D005565 ORTHO05D006950 3.4e-42 176.8 438 36.5
Haze_05809 Corylus avellana HOM05D005565 ORTHO05D006950 3.8e-41 173.3 139 64.0
Haze_26712 Corylus avellana HOM05D005565 ORTHO05D006950 2.7e-39 167.2 207 47.3
Hma1.2p1_0333F.1_g128290 Hydrangea macrophylla HOM05D005565 ORTHO05D006950 8.7e-38 162.2 92 83.7
AUR62027340 Chenopodium quinoa HOM05D005565 ORTHO05D006950 2.4e-35 154.1 272 44.1
BcaB07g32658 Brassica carinata HOM05D005565 ORTHO05D006950 1.2e-34 151.8 91 78.0
Nitab4.5_0002719g0090 Nicotiana tabacum HOM05D005565 ORTHO05D006950 1.5e-34 151.4 92 78.3
C07p15100 Brassica napus HOM05D005565 ORTHO05D006950 2.7e-31 140.6 98 71.4
TPR.G34068 Trifolium pratense HOM05D005565 ORTHO05D006950 7.4e-29 132.5 193 62.7
PRCOL_00005056 Prasinoderma coloniale HOM05D005565 ORTHO05D006950 4.2e-24 116.7 193 42.5
CDE10G0349 Ceratophyllum demersum HOM05D005565 ORTHO05D006950 1.6e-20 104.8 72 80.6
CBR_g23080 Chara braunii HOM05D005565 ORTHO05D006950 6.5e-17 92.8 185 33.5
SGA_v2.0_scaffold22G09881 Striga asiatica HOM05D005565 ORTHO05D006950 2.3e-14 84.3 92 48.9
BcaC01g00197 Brassica carinata HOM05D005565 ORTHO05D006950 2.5e-13 80.9 225 48.4
Ciclev10018985m.g Citrus clementina HOM05D000565 ORTHO05D003973 2.8e-12 77.4 126 45.2
CBR_g28574 Chara braunii HOM05D000409 ORTHO05D001956 1.3e-09 68.6 132 32.6
SGA_v2.0_scaffold273G46430 Striga asiatica HOM05D005565 ORTHO05D402892 1.3e-09 68.6 85 50.6
HanXRQChr09g0262121 Helianthus annuus HOM05D001563 ORTHO05D001956 3.8e-09 67.0 102 38.2
SGA_v2.0_scaffold74G24562 Striga asiatica HOM05D005565 ORTHO05D401758 3.8e-09 67.0 84 50.0
CBR_g28575 Chara braunii HOM05D001563 ORTHO05D001956 5.0e-09 66.6 103 36.9
CBR_g28571 Chara braunii HOM05D001563 ORTHO05D001956 8.5e-09 65.9 101 37.6
SEGI_22204 Sequoiadendron giganteum HOM05D001563 ORTHO05D001956 1.1e-08 65.5 102 36.3
SMO348G0102 Selaginella moellendorffii HOM05D001563 ORTHO05D001956 1.4e-08 65.1 108 33.3
SEGI_21623 Sequoiadendron giganteum HOM05D001563 ORTHO05D001956 2.5e-08 64.3 101 35.6
SMO201G0011 Selaginella moellendorffii HOM05D001563 ORTHO05D001956 3.2e-08 63.9 110 39.1
Solyc12g008750.3 Solanum lycopersicum HOM05D001563 ORTHO05D001956 3.2e-08 63.9 103 31.1
Sopen12g003680 Solanum pennellii HOM05D001563 ORTHO05D001956 3.2e-08 63.9 103 31.1
Ca_19741_v3 Cicer arietinum L. HOM05D001563 ORTHO05D001956 4.2e-08 63.5 101 36.6
Mapoly0038s0101 Marchantia polymorpha HOM05D001563 ORTHO05D001956 4.2e-08 63.5 97 35.1
PGSC0003DMG400000344 Solanum tuberosum HOM05D001563 ORTHO05D001956 5.5e-08 63.2 103 31.1
ECA232G1424 Erigeron canadensis HOM05D001563 ORTHO05D001956 1.2e-07 62.0 102 36.3
HanXRQChr11g0324861 Helianthus annuus HOM05D001563 ORTHO05D001956 1.2e-07 62.0 98 36.7
Nitab4.5_0005471g0020 Nicotiana tabacum HOM05D001563 ORTHO05D001956 1.2e-07 62.0 103 31.1
Nitab4.5_0000540g0190 Nicotiana tabacum HOM05D001563 ORTHO05D001956 1.6e-07 61.6 103 31.1
AagrBONN_evm.TU.Sc2ySwM_117.747 Anthoceros agrestis HOM05D001563 ORTHO05D001956 3.6e-07 60.5 100 35.0
SGA_v2.0_scaffold2G01114 Striga asiatica HOM05D001563 ORTHO05D001956 6.1e-07 59.7 102 30.4
SEGI_35596 Sequoiadendron giganteum HOM05D001563 ORTHO05D001956 1.0e-06 58.9 101 32.7
Lsat_1_v5_gn_4_153381 Lactuca sativa HOM05D001563 ORTHO05D012319 1.4e-06 58.5 101 30.7
Lalb_Chr15g0080491 Lupinus albus HOM05D001563 ORTHO05D001956 1.4e-06 58.5 101 33.7
SGA_v2.0_scaffold221G42757 Striga asiatica HOM05D001563 ORTHO05D001956 1.4e-06 58.5 103 30.1
Dinv26814 Davidia involucrata HOM05D001563 ORTHO05D001956 1.8e-06 58.2 100 34.0
Dinv20611 Davidia involucrata HOM05D001563 ORTHO05D001956 3.0e-06 57.4 96 32.3
ECA232G2130 Erigeron canadensis HOM05D001563 ORTHO05D001956 3.0e-06 57.4 101 30.7
MCO15G197 Micromonas commoda HOM05D002097 ORTHO05D004937 6.7e-06 56.2 101 32.7
Os11g0636900 Oryza sativa ssp. japonica HOM05D001563 ORTHO05D001956 8.8e-06 55.8 143 27.3
Phvul.005G001300 Phaseolus vulgaris HOM05D001563 ORTHO05D001956 8.8e-06 55.8 100 31.0


User provided reference genes

Program Settings