Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
LjContig00564g0010691 Lotus japonicus HOM05D006044 ORTHO05D007653 9.8e-65 250.0 126 100.0
Medtr5g089300 Medicago truncatula HOM05D006044 ORTHO05D007653 1.6e-62 242.7 123 98.4
TPR.G16400 Trifolium pratense HOM05D006044 ORTHO05D007653 1.6e-62 242.7 126 96.8
Glyma.02G278800 Glycine max HOM05D006044 ORTHO05D007653 2.0e-62 242.3 123 98.4
Phvul.008G202000 Phaseolus vulgaris HOM05D006044 ORTHO05D007653 2.0e-62 242.3 123 98.4
VMungo0647G0704 Vigna mungo HOM05D006044 ORTHO05D007653 2.0e-62 242.3 123 98.4
Atru.chr3.2998 Acer truncatum HOM05D006044 ORTHO05D007653 2.7e-62 241.9 123 97.6
Glyma.14G035900 Glycine max HOM05D006044 ORTHO05D007653 2.7e-62 241.9 123 97.6
Psat2g020640 Pisum sativum HOM05D006044 ORTHO05D007653 4.5e-62 241.1 123 97.6
Cpa.g.sc157.53 Carica papaya HOM05D006044 ORTHO05D007653 5.9e-62 240.7 123 96.7
Manes.01G177500 Manihot esculenta HOM05D006044 ORTHO05D007653 1.0e-61 240.0 123 96.7
TAR633G2719 Trochodendron aralioides HOM05D006044 ORTHO05D007653 1.0e-61 240.0 123 97.6
arahy.Tifrunner.gnm1.ann1.6RB8S0 Arachis hypogaea HOM05D006044 ORTHO05D007653 1.3e-61 239.6 123 96.7
arahy.Tifrunner.gnm1.ann1.L4QR06 Arachis hypogaea HOM05D006044 ORTHO05D007653 1.3e-61 239.6 123 96.7
CANSAT11G0073 Cannabis sativa HOM05D006044 ORTHO05D007653 1.3e-61 239.6 123 96.7
Ca_11896_v3 Cicer arietinum L. HOM05D006044 ORTHO05D007653 1.7e-61 239.2 123 95.9
Lalb_Chr10g0106211 Lupinus albus HOM05D006044 ORTHO05D007653 2.3e-61 238.8 123 96.7
Lalb_Chr17g0347851 Lupinus albus HOM05D006044 ORTHO05D007653 2.3e-61 238.8 123 96.7
Nn7g36759 Nelumbo nucifera HOM05D006044 ORTHO05D007653 2.3e-61 238.8 123 96.7
THA.LOC104811201 Tarenaya hassleriana HOM05D006044 ORTHO05D007653 2.9e-61 238.4 123 95.9
Thecc.09G247200 Theobroma cacao HOM05D006044 ORTHO05D007653 2.9e-61 238.4 123 95.9
Ca_06201_v3 Cicer arietinum L. HOM05D006044 ORTHO05D007653 3.8e-61 238.0 123 95.9
THA.LOC104799136 Tarenaya hassleriana HOM05D006044 ORTHO05D007653 5.0e-61 237.7 123 95.9
CSS0014603 Camellia sinensis var. sinensis HOM05D006044 ORTHO05D007653 8.6e-61 236.9 123 95.1
COL.COLO4_24488 Corchorus olitorius HOM05D006044 ORTHO05D007653 8.6e-61 236.9 123 95.1
Gohir.A13G218400 Gossypium hirsutum HOM05D006044 ORTHO05D007653 1.1e-60 236.5 123 95.1
Gohir.D13G222100 Gossypium hirsutum HOM05D006044 ORTHO05D007653 1.1e-60 236.5 123 95.1
Gorai.013G253200 Gossypium raimondii HOM05D006044 ORTHO05D007653 1.1e-60 236.5 123 95.1
PGR102G0082 Punica granatum HOM05D006044 ORTHO05D007653 1.1e-60 236.5 123 95.1
ClCG02G022780 Citrullus lanatus HOM05D006044 ORTHO05D007653 1.9e-60 235.7 124 96.0
MELO3C014555.2 Cucumis melo HOM05D006044 ORTHO05D007653 1.9e-60 235.7 124 96.0
FvH4_4g01940 Fragaria vesca HOM05D006044 ORTHO05D007653 1.9e-60 235.7 123 94.3
FAN12G1761 Fragaria x ananassa HOM05D006044 ORTHO05D007653 1.9e-60 235.7 123 94.3
FAN22G1152 Fragaria x ananassa HOM05D006044 ORTHO05D007653 1.9e-60 235.7 123 94.3
Prupe.1G400800 Prunus persica HOM05D006044 ORTHO05D007653 1.9e-60 235.7 123 95.9
ATR0763G184 Amborella trichopoda HOM05D006044 ORTHO05D007653 2.5e-60 235.3 123 94.3
Lsat_1_v5_gn_2_28381 Lactuca sativa HOM05D006044 ORTHO05D007653 2.5e-60 235.3 126 91.3
Nitab4.5_0000069g0030 Nicotiana tabacum HOM05D006044 ORTHO05D007653 2.5e-60 235.3 123 93.5
Nitab4.5_0011609g0020 Nicotiana tabacum HOM05D006044 ORTHO05D007653 2.5e-60 235.3 123 93.5
QL01p016848 Quercus lobata HOM05D006044 ORTHO05D007653 2.5e-60 235.3 123 93.5
GSVIVG01037329001 Vitis vinifera HOM05D006044 ORTHO05D007653 3.3e-60 235.0 126 93.7
HanXRQChr14g0453721 Helianthus annuus HOM05D006044 ORTHO05D007653 4.2e-60 234.6 126 91.3
Lsat_1_v5_gn_2_111680 Lactuca sativa HOM05D006044 ORTHO05D007653 4.2e-60 234.6 125 91.2
PSO339G3702 Papaver somniferum HOM05D006044 ORTHO05D007653 4.2e-60 234.6 123 94.3
PSO384G3308 Papaver somniferum HOM05D006044 ORTHO05D007653 4.2e-60 234.6 123 94.3
HanXRQChr07g0196181 Helianthus annuus HOM05D006044 ORTHO05D007653 7.2e-60 233.8 126 91.3
Oeu032567.1 Olea europaea HOM05D006044 ORTHO05D007653 7.2e-60 233.8 121 94.2
Peaxi162Scf00021g02522 Petunia axillaris HOM05D006044 ORTHO05D007653 7.2e-60 233.8 123 93.5
Ciclev10017186m.g Citrus clementina HOM05D006044 ORTHO05D007653 1.2e-59 233.0 123 92.7
Potri.001G273200 Populus trichocarpa HOM05D006044 ORTHO05D007653 1.2e-59 233.0 121 95.0
Prupe.1G025000 Prunus persica HOM05D006044 ORTHO05D007653 1.2e-59 233.0 123 93.5
RcHm_v2.0_Chr4g0388901 Rosa chinensis HOM05D006044 ORTHO05D007653 1.2e-59 233.0 123 92.7
Aa31LG3G15040 Aethionema arabicum HOM05D006044 ORTHO05D007653 1.6e-59 232.6 123 93.5
Eucgr.B03747 Eucalyptus grandis HOM05D006044 ORTHO05D007653 1.6e-59 232.6 123 92.7
MD08G1047500 Malus domestica HOM05D006044 ORTHO05D007653 1.6e-59 232.6 123 94.3
Sc12g0010240 Simmondsia chinensis HOM05D006044 ORTHO05D007653 1.6e-59 232.6 123 93.5
Cc03_g11600 Coffea canephora HOM05D006044 ORTHO05D007653 3.6e-59 231.5 119 95.8
TWI75G0655 Tripterygium wilfordii HOM05D006044 ORTHO05D007653 3.6e-59 231.5 123 93.5
CDE09G0744 Ceratophyllum demersum HOM05D006044 ORTHO05D007653 4.7e-59 231.1 123 92.7
SEGI_07566 Sequoiadendron giganteum HOM05D006044 ORTHO05D007653 8.0e-59 230.3 123 92.7
Solyc01g008360.3 Solanum lycopersicum HOM05D006044 ORTHO05D007653 1.0e-58 229.9 119 94.1
Sopen01g003880 Solanum pennellii HOM05D006044 ORTHO05D007653 1.0e-58 229.9 119 94.1
PGSC0003DMG400016393 Solanum tuberosum HOM05D006044 ORTHO05D007653 1.0e-58 229.9 119 94.1
unitig_27.g25012 Utricularia gibba HOM05D006044 ORTHO05D007653 1.4e-58 229.6 121 92.6
MBI19_g20794_MAGBIO Magnolia biondii HOM05D006044 ORTHO05D007653 3.0e-58 228.4 120 93.3
Potri.009G067500 Populus trichocarpa HOM05D006044 ORTHO05D007653 4.0e-58 228.0 121 92.6
Cfa009890 Carpinus fangiana HOM05D006044 ORTHO05D007653 5.2e-58 227.6 120 92.5
Haze_23252 Corylus avellana HOM05D006044 ORTHO05D007653 5.2e-58 227.6 120 92.5
Hma1.2p1_0214F.1_g090800 Hydrangea macrophylla HOM05D006044 ORTHO05D007653 5.2e-58 227.6 126 90.5
Hma1.2p1_1357F.1_g277915 Hydrangea macrophylla HOM05D006044 ORTHO05D007653 5.2e-58 227.6 121 92.6
SalBow8G2527 Salvia bowleyana HOM05D006044 ORTHO05D007653 5.2e-58 227.6 118 94.1
Migut.N02377 Erythranthe guttata HOM05D006044 ORTHO05D007653 1.2e-57 226.5 121 90.1
Rhsim13G0207900 Rhododendron simsii HOM05D006044 ORTHO05D007653 1.2e-57 226.5 123 91.1
Sabra09G0050500 Salix brachista HOM05D006044 ORTHO05D007653 1.2e-57 226.5 121 89.3
A03p05430 Brassica napus HOM05D006044 ORTHO05D007653 1.5e-57 226.1 123 90.2
C03p06320 Brassica napus HOM05D006044 ORTHO05D007653 1.5e-57 226.1 123 90.2
BolC3t13140H Brassica oleracea HOM05D006044 ORTHO05D007653 1.5e-57 226.1 123 90.2
BraA03t09881Z Brassica rapa HOM05D006044 ORTHO05D007653 1.5e-57 226.1 123 90.2
CiPaw.14G111700 Carya illinoinensis HOM05D006044 ORTHO05D007653 1.5e-57 226.1 120 91.7
BolC9t59301H Brassica oleracea HOM05D004351 ORTHO05D005196 2.6e-57 225.3 123 89.4
SGA_v2.0_scaffold310G48206 Striga asiatica HOM05D006044 ORTHO05D007653 2.6e-57 225.3 121 90.1
SGA_v2.0_scaffold3G01443 Striga asiatica HOM05D006044 ORTHO05D007653 2.6e-57 225.3 121 90.1
A10p25610 Brassica napus HOM05D006044 ORTHO05D007653 3.4e-57 224.9 123 88.6
BraA10t44628Z Brassica rapa HOM05D006044 ORTHO05D007653 3.4e-57 224.9 123 88.6
SalBow1G1993 Salvia bowleyana HOM05D006044 ORTHO05D000010 3.4e-57 224.9 117 93.2
CDE08G0916 Ceratophyllum demersum HOM05D006044 ORTHO05D007653 4.4e-57 224.6 123 91.9
ECA238G3020 Erigeron canadensis HOM05D006044 ORTHO05D007653 4.4e-57 224.6 123 88.6
Sp6g31450 Schrenkiella parvula HOM05D006044 ORTHO05D007653 4.4e-57 224.6 123 89.4
Thhalv10015024m.g Eutrema salsugineum HOM05D006044 ORTHO05D007653 5.7e-57 224.2 123 89.4
AL6G22970 Arabidopsis lyrata HOM05D006044 ORTHO05D007653 7.5e-57 223.8 123 90.2
AT5G12190 Arabidopsis thaliana HOM05D006044 ORTHO05D007653 7.5e-57 223.8 123 90.2
BcaB01g05427 Brassica carinata HOM05D006044 ORTHO05D007653 9.8e-57 223.4 123 88.6
Ah.05g173120 Amaranthus hybridus HOM05D006044 ORTHO05D007653 1.3e-56 223.0 121 90.1
Dinv09443 Davidia involucrata HOM05D006044 ORTHO05D007653 1.7e-56 222.6 116 94.8
Nn017s41474 Nelumbo nucifera HOM05D006044 ORTHO05D007653 2.2e-56 222.2 116 95.7
AagrBONN_evm.TU.Sc2ySwM_117.1592 Anthoceros agrestis HOM05D006044 ORTHO05D007653 2.9e-56 221.9 123 87.8
Aqoxy2G00401 Aquilegia oxysepala HOM05D006044 ORTHO05D007653 2.9e-56 221.9 120 90.8
EL10Ac1g00766 Beta vulgaris HOM05D006044 ORTHO05D007653 2.9e-56 221.9 121 90.1
EL10Ac5g12840 Beta vulgaris HOM05D006044 ORTHO05D007653 2.9e-56 221.9 121 90.1
unitig_699.g19149 Utricularia gibba HOM05D006044 ORTHO05D007653 2.9e-56 221.9 121 90.9
HPP92_019149 Vanilla planifolia HOM05D006044 ORTHO05D007653 2.9e-56 221.9 119 90.8
Carub.0006s1069 Capsella rubella HOM05D006044 ORTHO05D007653 3.7e-56 221.5 123 89.4
AUR62013740 Chenopodium quinoa HOM05D006044 ORTHO05D007653 8.3e-56 220.3 121 88.4
AUR62023411 Chenopodium quinoa HOM05D006044 ORTHO05D007653 8.3e-56 220.3 121 88.4
Dinv37467 Davidia involucrata HOM05D006044 ORTHO05D007653 1.8e-55 219.2 116 93.1
Mapoly0207s0011 Marchantia polymorpha HOM05D006044 ORTHO05D007653 2.4e-55 218.8 122 86.1
Ca_07394_v3 Cicer arietinum L. HOM05D006044 ORTHO05D007653 5.4e-55 217.6 123 89.4
Pp3c1_15740 Physcomitrium patens HOM05D006044 ORTHO05D007653 2.0e-54 215.7 119 86.6
CBR_g501 Chara braunii HOM05D006044 ORTHO05D007653 1.0e-53 213.4 120 85.8
Zm00001eb062150 Zea mays HOM05D006044 ORTHO05D007653 1.0e-53 213.4 122 85.2
Os03g0811700 Oryza sativa ssp. japonica HOM05D006044 ORTHO05D007653 1.3e-53 213.0 122 85.2
Zm00001eb212190 Zea mays HOM05D006044 ORTHO05D007653 1.3e-53 213.0 122 85.2
BcaNung07015 Brassica carinata HOM05D006044 ORTHO05D007653 1.5e-52 209.5 115 88.7
CARHR200930 Cardamine hirsuta HOM05D006044 ORTHO05D007653 2.1e-51 205.7 123 82.1
CSS0031497 Camellia sinensis var. sinensis HOM05D006044 ORTHO05D007653 4.9e-48 194.5 137 73.7
Aqoxy2G00402 Aquilegia oxysepala HOM05D006044 ORTHO05D007653 8.3e-48 193.7 123 74.8
SMO143G0133 Selaginella moellendorffii HOM05D006044 ORTHO05D007653 2.0e-46 189.1 115 80.0
AL3G46680 Arabidopsis lyrata HOM05D006044 ORTHO05D007653 4.6e-46 188.0 114 78.1
MD13G1049300 Malus domestica HOM05D006044 ORTHO05D007653 1.1e-44 183.3 104 86.5
Cre03.g158950 Chlamydomonas reinhardtii HOM05D006044 ORTHO05D007653 3.6e-43 178.3 119 71.4
Duzib170G0372 Durio zibethinus HOM05D006044 ORTHO05D007653 6.4e-40 167.5 85 94.1
MCO15G700 Micromonas commoda HOM05D006044 ORTHO05D007653 7.1e-39 164.1 93 83.9
EL10Ac9g21533 Beta vulgaris HOM05D006044 ORTHO05D007653 6.2e-35 151.0 89 84.3
PRCOL_00006242 Prasinoderma coloniale HOM05D006044 ORTHO05D007653 1.1e-31 140.2 109 58.7
Haze_26695 Corylus avellana HOM05D006044 ORTHO05D007653 3.9e-29 131.7 113 50.4
AT2G14870 Arabidopsis thaliana HOM05D006044 ORTHO05D007653 3.2e-23 112.1 70 72.9
SGA_v2.0_scaffold34G13906 Striga asiatica HOM05D006044 ORTHO05D007653 3.3e-20 102.1 96 56.2
SalBow1G3729 Salvia bowleyana HOM05D006044 ORTHO05D357234 6.4e-16 87.8 42 97.6
SGA_v2.0_scaffold5G02950 Striga asiatica HOM05D006044 ORTHO05D007653 7.1e-15 84.3 68 60.3
SGA_v2.0_scaffold198G41064 Striga asiatica HOM05D006044 ORTHO05D400222 3.8e-08 62.0 102 40.2
PGR102G3118 Punica granatum HOM05D002411 ORTHO05D002564 1.1e-07 60.5 84 40.5
Dinv40333 Davidia involucrata HOM05D001413 ORTHO05D001385 7.1e-07 57.8 81 37.0
Pp3c14_2340 Physcomitrium patens HOM05D006044 ORTHO05D318821 7.1e-07 57.8 31 83.9
COL.COLO4_11167 Corchorus olitorius HOM05D002411 ORTHO05D002564 1.2e-06 57.0 86 34.9
Gorai.003G183300 Gossypium raimondii HOM05D000142 ORTHO05D003173 1.6e-06 56.6 84 35.7
Duzib150G0537 Durio zibethinus HOM05D002411 ORTHO05D002564 2.1e-06 56.2 75 36.0
Duzib168G0560 Durio zibethinus HOM05D002411 ORTHO05D002564 2.1e-06 56.2 75 36.0
MBI14_g02603_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000852 2.1e-06 56.2 114 34.2
Thecc.09G359100 Theobroma cacao HOM05D002411 ORTHO05D002564 2.1e-06 56.2 75 36.0
Potri.005G024600 Populus trichocarpa HOM05D001413 ORTHO05D001385 3.5e-06 55.5 64 45.3
Dinv30820 Davidia involucrata HOM05D001413 ORTHO05D001385 4.6e-06 55.1 86 36.0
MBI14_g23541_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000852 4.6e-06 55.1 114 34.2
Cc09_g04940 Coffea canephora HOM05D000604 ORTHO05D004856 6.0e-06 54.7 83 37.3
Haze_04133 Corylus avellana HOM05D001413 ORTHO05D001385 6.0e-06 54.7 78 35.9
FvH4_3g41070 Fragaria vesca HOM05D019648 ORTHO05D197128 6.0e-06 54.7 59 44.1
Gohir.A03G024900 Gossypium hirsutum HOM05D002411 ORTHO05D002564 6.0e-06 54.7 75 34.7
MBI16_g24360_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000852 6.0e-06 54.7 108 32.4
Sed0014227 Sechium edule HOM05D000604 ORTHO05D004856 6.0e-06 54.7 107 33.6
AL1G12240 Arabidopsis lyrata HOM05D001413 ORTHO05D001385 7.9e-06 54.3 74 35.1
A02p24730 Brassica napus HOM05D001413 ORTHO05D001385 7.9e-06 54.3 74 36.5
Eucgr.B04011 Eucalyptus grandis HOM05D002411 ORTHO05D002564 7.9e-06 54.3 82 39.0
Mapoly0042s0009 Marchantia polymorpha HOM05D000142 ORTHO05D001253 7.9e-06 54.3 96 33.3


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