Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P841T29 Lonicera japonica HOM05D003377 ORTHO05D004080 7.4e-83 310.5 154 100.0
Lj2C21T5 Lonicera japonica HOM05D003377 ORTHO05D004080 8.6e-47 190.7 172 67.4
Thecc.10G084800 Theobroma cacao HOM05D003377 ORTHO05D004080 2.3e-39 166.0 162 60.5
TWI63G1477 Tripterygium wilfordii HOM05D003377 ORTHO05D004080 3.0e-39 165.6 161 60.2
Aqoxy7G02722 Aquilegia oxysepala HOM05D003377 ORTHO05D004080 3.9e-39 165.2 168 59.5
Nn2g13815 Nelumbo nucifera HOM05D003377 ORTHO05D004080 3.9e-39 165.2 165 59.4
Aqoxy2G01466 Aquilegia oxysepala HOM05D003377 ORTHO05D004080 6.6e-39 164.5 169 60.9
Actinidia34803 Actinidia chinensis HOM05D003377 ORTHO05D004080 8.6e-39 164.1 146 63.7
Sc09g0006040 Simmondsia chinensis HOM05D003377 ORTHO05D004080 8.6e-39 164.1 164 62.2
COL.COLO4_34224 Corchorus olitorius HOM05D003377 ORTHO05D004080 1.9e-38 162.9 162 59.9
Lsat_1_v5_gn_8_20881 Lactuca sativa HOM05D003377 ORTHO05D004080 1.9e-38 162.9 169 60.4
Thecc.10G085000 Theobroma cacao HOM05D003377 ORTHO05D004080 2.5e-38 162.5 162 59.9
Actinidia38871 Actinidia chinensis HOM05D003377 ORTHO05D004080 7.3e-38 161.0 168 57.1
Rhsim09G0147300 Rhododendron simsii HOM05D003377 ORTHO05D004080 9.5e-38 160.6 171 56.1
CANSAT56G4416 Cannabis sativa HOM05D003377 ORTHO05D004080 1.2e-37 160.2 168 57.7
vmacro04833 Vaccinium macrocarpon HOM05D003377 ORTHO05D004080 2.1e-37 159.5 161 60.2
HanXRQChr17g0546921 Helianthus annuus HOM05D003377 ORTHO05D004080 4.7e-37 158.3 151 62.3
Ah.04g156330 Amaranthus hybridus HOM05D003377 ORTHO05D004080 8.1e-37 157.5 167 58.1
MELO3C019829.2 Cucumis melo HOM05D003377 ORTHO05D004080 1.1e-36 157.1 162 59.3
Hund10377 Selenicereus undatus HOM05D003377 ORTHO05D004080 1.4e-36 156.8 153 54.9
TAR633G2602 Trochodendron aralioides HOM05D003377 ORTHO05D004080 1.4e-36 156.8 161 59.0
Aqoxy7G02724 Aquilegia oxysepala HOM05D003377 ORTHO05D004080 1.8e-36 156.4 171 57.9
vmacro10250 Vaccinium macrocarpon HOM05D003377 ORTHO05D004080 2.3e-36 156.0 139 65.5
HPP92_007057 Vanilla planifolia HOM05D003377 ORTHO05D004080 2.3e-36 156.0 162 58.0
CsaV3_4G037990 Cucumis sativus L. HOM05D003377 ORTHO05D004080 8.9e-36 154.1 162 58.6
CsaV3_UNG009110 Cucumis sativus L. HOM05D003377 ORTHO05D004080 8.9e-36 154.1 162 58.6
CsaV3_UNG038200 Cucumis sativus L. HOM05D003377 ORTHO05D004080 8.9e-36 154.1 162 58.6
CsaV3_UNG042220 Cucumis sativus L. HOM05D003377 ORTHO05D004080 8.9e-36 154.1 162 58.6
CsaV3_UNG044270 Cucumis sativus L. HOM05D003377 ORTHO05D004080 8.9e-36 154.1 162 58.6
CsaV3_UNG077600 Cucumis sativus L. HOM05D003377 ORTHO05D004080 8.9e-36 154.1 162 58.6
CsaV3_UNG096720 Cucumis sativus L. HOM05D003377 ORTHO05D004080 8.9e-36 154.1 162 58.6
CsaV3_UNG134030 Cucumis sativus L. HOM05D003377 ORTHO05D004080 8.9e-36 154.1 162 58.6
CsaV3_UNG175360 Cucumis sativus L. HOM05D003377 ORTHO05D004080 8.9e-36 154.1 162 58.6
CsaV3_UNG185410 Cucumis sativus L. HOM05D003377 ORTHO05D004080 8.9e-36 154.1 162 58.6
CsaV3_UNG219500 Cucumis sativus L. HOM05D003377 ORTHO05D004080 8.9e-36 154.1 162 58.6
CSS0024679 Camellia sinensis var. sinensis HOM05D003377 ORTHO05D004080 1.2e-35 153.7 147 59.2
Manes.07G133144 Manihot esculenta HOM05D003377 ORTHO05D004080 2.6e-35 152.5 132 65.2
CSS0003122 Camellia sinensis var. sinensis HOM05D003377 ORTHO05D004080 3.4e-35 152.1 148 58.1
Cfa006631 Carpinus fangiana HOM05D003377 ORTHO05D004080 7.6e-35 151.0 162 55.6
CsaV3_2G020860 Cucumis sativus L. HOM05D003377 ORTHO05D004080 7.6e-35 151.0 134 62.7
CsaV3_2G021160 Cucumis sativus L. HOM05D003377 ORTHO05D004080 7.6e-35 151.0 134 62.7
CsaV3_UNG081620 Cucumis sativus L. HOM05D003377 ORTHO05D004080 7.6e-35 151.0 134 62.7
MSTRG.390 Avicennia marina HOM05D003377 ORTHO05D004080 1.3e-34 150.2 165 57.0
EL10Ac5g10616 Beta vulgaris HOM05D003377 ORTHO05D004080 1.3e-34 150.2 157 57.3
CsaV3_UNG082620 Cucumis sativus L. HOM05D003377 ORTHO05D004080 1.3e-34 150.2 162 57.4
ClCG08G007750 Citrullus lanatus HOM05D003377 ORTHO05D004080 1.7e-34 149.8 134 62.7
Dinv31238 Davidia involucrata HOM05D003377 ORTHO05D004080 6.4e-34 147.9 132 62.9
SHI08878 Sapria himalayana HOM05D003377 ORTHO05D004080 6.4e-34 147.9 149 57.7
Sed0023186 Sechium edule HOM05D003377 ORTHO05D004080 8.4e-34 147.5 168 54.8
Cpa.g.sc53.138 Carica papaya HOM05D003377 ORTHO05D004080 1.4e-33 146.7 168 55.4
Cc02_g10870 Coffea canephora HOM05D003377 ORTHO05D004080 3.2e-33 145.6 163 54.0
THA.LOC104816427 Tarenaya hassleriana HOM05D003377 ORTHO05D004080 3.2e-33 145.6 136 57.4
Peaxi162Scf00145g00117 Petunia axillaris HOM05D003377 ORTHO05D004080 9.2e-33 144.1 142 58.5
SGA_v2.0_scaffold51G18712 Striga asiatica HOM05D003377 ORTHO05D004080 2.1e-32 142.9 175 53.7
unitig_899.g15040 Utricularia gibba HOM05D003377 ORTHO05D004080 2.1e-32 142.9 173 52.0
ECA233G1775 Erigeron canadensis HOM05D003377 ORTHO05D004080 3.5e-32 142.1 147 55.8
Solyc11g008290.1 Solanum lycopersicum HOM05D003377 ORTHO05D004080 3.5e-32 142.1 170 51.2
Prupe.2G208400 Prunus persica HOM05D003377 ORTHO05D004080 6.0e-32 141.4 137 59.1
Sopen11g004100 Solanum pennellii HOM05D003377 ORTHO05D004080 6.0e-32 141.4 171 50.3
Migut.F01703 Erythranthe guttata HOM05D003377 ORTHO05D004080 7.8e-32 141.0 165 56.4
FvH4_7g18730 Fragaria vesca HOM05D003377 ORTHO05D004080 7.8e-32 141.0 134 59.7
Phvul.005G012700 Phaseolus vulgaris HOM05D003377 ORTHO05D004080 1.0e-31 140.6 138 55.8
PGSC0003DMG400031069 Solanum tuberosum HOM05D003377 ORTHO05D004080 6.6e-31 137.9 174 51.7
Peaxi162Scf00160g00719 Petunia axillaris HOM05D003377 ORTHO05D004080 1.5e-30 136.7 170 52.4
Gorai.009G310500 Gossypium raimondii HOM05D003377 ORTHO05D004080 1.9e-30 136.3 161 52.8
Lalb_Chr18g0048181 Lupinus albus HOM05D003377 ORTHO05D004080 1.9e-30 136.3 172 50.0
CDE08G1030 Ceratophyllum demersum HOM05D003377 ORTHO05D004080 4.3e-30 135.2 133 59.4
ATR1132G106 Amborella trichopoda HOM05D003377 ORTHO05D004080 5.6e-30 134.8 159 54.1
Aqoxy7G02723 Aquilegia oxysepala HOM05D003377 ORTHO05D004080 5.6e-30 134.8 124 62.1
Glyma.06G313200 Glycine max HOM05D003377 ORTHO05D004080 5.6e-30 134.8 171 49.1
FAN01G1901 Fragaria x ananassa HOM05D003377 ORTHO05D004080 7.3e-30 134.4 133 57.9
AL3G21730 Arabidopsis lyrata HOM05D003377 ORTHO05D004080 1.2e-29 133.7 167 50.3
Gohir.A05G293201 Gossypium hirsutum HOM05D003377 ORTHO05D004080 1.2e-29 133.7 88 73.9
PSO339G0916 Papaver somniferum HOM05D003377 ORTHO05D004080 1.2e-29 133.7 173 50.3
Eucgr.G02870 Eucalyptus grandis HOM05D003377 ORTHO05D004080 3.6e-29 132.1 144 53.5
MD01G1102800 Malus domestica HOM05D003377 ORTHO05D004080 4.7e-29 131.7 162 53.1
Psat0s6878g0040 Pisum sativum HOM05D003377 ORTHO05D004080 4.7e-29 131.7 139 59.0
VMungo1080G1642 Vigna mungo HOM05D003377 ORTHO05D004080 4.7e-29 131.7 131 55.0
Duzib106G0439 Durio zibethinus HOM05D003377 ORTHO05D004080 8.1e-29 131.0 87 73.6
RcHm_v2.0_Chr1g0362501 Rosa chinensis HOM05D003377 ORTHO05D004080 8.1e-29 131.0 135 57.8
C05p57770 Brassica napus HOM05D003377 ORTHO05D004080 1.1e-28 130.6 171 53.2
BolC5t34434H Brassica oleracea HOM05D003377 ORTHO05D004080 1.1e-28 130.6 171 53.2
CARHR084880 Cardamine hirsuta HOM05D003377 ORTHO05D004080 1.1e-28 130.6 167 48.5
Psat0s4296g0120 Pisum sativum HOM05D003377 ORTHO05D004080 1.1e-28 130.6 139 58.3
Thhalv10021363m.g Eutrema salsugineum HOM05D003377 ORTHO05D004080 1.8e-28 129.8 138 52.2
Mapoly0003s0234 Marchantia polymorpha HOM05D003377 ORTHO05D004080 2.4e-28 129.4 124 58.1
Zm00001eb104270 Zea mays HOM05D003377 ORTHO05D004080 2.4e-28 129.4 139 54.0
Gohir.D05G293901 Gossypium hirsutum HOM05D003377 ORTHO05D004080 3.1e-28 129.0 161 50.9
Ciclev10032576m.g Citrus clementina HOM05D003377 ORTHO05D004080 5.2e-28 128.3 125 56.8
Psat4g177920 Pisum sativum HOM05D003377 ORTHO05D004080 5.2e-28 128.3 139 57.6
SEGI_01810 Sequoiadendron giganteum HOM05D003377 ORTHO05D004080 5.2e-28 128.3 164 52.4
A05p38760 Brassica napus HOM05D003377 ORTHO05D004080 6.8e-28 127.9 174 51.1
BraA05t22667Z Brassica rapa HOM05D003377 ORTHO05D004080 6.8e-28 127.9 174 51.1
Psat0s7345g0040 Pisum sativum HOM05D003377 ORTHO05D004080 6.8e-28 127.9 139 57.6
QL08p054194 Quercus lobata HOM05D003377 ORTHO05D004080 6.8e-28 127.9 87 70.1
Nitab4.5_0001450g0130 Nicotiana tabacum HOM05D003377 ORTHO05D004080 8.9e-28 127.5 88 71.6
PSO801G0341 Papaver somniferum HOM05D003377 ORTHO05D004080 8.9e-28 127.5 170 50.0
Psat0s4296g0080 Pisum sativum HOM05D003377 ORTHO05D004080 1.2e-27 127.1 139 57.6
TPR.G5122 Trifolium pratense HOM05D003377 ORTHO05D004080 1.5e-27 126.7 138 58.0
CiPaw.01G268200 Carya illinoinensis HOM05D003377 ORTHO05D004080 2.0e-27 126.3 165 50.9
Sp3g08670 Schrenkiella parvula HOM05D003377 ORTHO05D004080 2.6e-27 125.9 168 48.8
Ca_19554_v3 Cicer arietinum L. HOM05D003377 ORTHO05D004080 3.4e-27 125.6 134 56.7
Nitab4.5_0006187g0030 Nicotiana tabacum HOM05D000651 ORTHO05D001126 5.8e-27 124.8 129 54.3
Psat0s1397g0040 Pisum sativum HOM05D003377 ORTHO05D004080 5.8e-27 124.8 139 56.8
Psat0s1397g0080 Pisum sativum HOM05D003377 ORTHO05D004080 5.8e-27 124.8 139 56.8
Psat0s1397g0120 Pisum sativum HOM05D003377 ORTHO05D004080 5.8e-27 124.8 139 56.8
Psat0s4205g0040 Pisum sativum HOM05D003377 ORTHO05D004080 5.8e-27 124.8 139 56.8
Psat0s5564g0040 Pisum sativum HOM05D003377 ORTHO05D004080 5.8e-27 124.8 139 56.8
Psat0s5661g0040 Pisum sativum HOM05D003377 ORTHO05D004080 5.8e-27 124.8 139 56.8
Psat0s6588g0040 Pisum sativum HOM05D003377 ORTHO05D004080 5.8e-27 124.8 139 56.8
Psat0s7804g0040 Pisum sativum HOM05D003377 ORTHO05D004080 5.8e-27 124.8 139 56.8
Psat0s7999g0040 Pisum sativum HOM05D003377 ORTHO05D004080 5.8e-27 124.8 139 56.8
Psat4g154440 Pisum sativum HOM05D003377 ORTHO05D004080 5.8e-27 124.8 139 56.8
Psat4g154480 Pisum sativum HOM05D003377 ORTHO05D004080 5.8e-27 124.8 139 56.8
Psat4g168880 Pisum sativum HOM05D003377 ORTHO05D004080 5.8e-27 124.8 139 56.8
Psat4g175000 Pisum sativum HOM05D003377 ORTHO05D004080 5.8e-27 124.8 139 56.8
Psat4g180920 Pisum sativum HOM05D003377 ORTHO05D004080 5.8e-27 124.8 139 56.8
Psat4g188360 Pisum sativum HOM05D003377 ORTHO05D004080 5.8e-27 124.8 139 56.8
Psat5g144040 Pisum sativum HOM05D003377 ORTHO05D004080 5.8e-27 124.8 139 56.8
CsaV3_UNG073590 Cucumis sativus L. HOM05D003377 ORTHO05D004080 7.6e-27 124.4 108 61.1
Psat4g169920 Pisum sativum HOM05D003377 ORTHO05D004080 9.9e-27 124.0 139 56.8
Psat4g171360 Pisum sativum HOM05D003377 ORTHO05D004080 9.9e-27 124.0 139 56.8
Psat4g176400 Pisum sativum HOM05D003377 ORTHO05D004080 1.3e-26 123.6 139 56.1
PSO832G0433 Papaver somniferum HOM05D003377 ORTHO05D004080 1.7e-26 123.2 167 49.1
Pp3c1_20040 Physcomitrium patens HOM05D003377 ORTHO05D004080 1.7e-26 123.2 172 50.0
Psat4g170360 Pisum sativum HOM05D003377 ORTHO05D004080 1.7e-26 123.2 139 56.1
Potri.010G227500 Populus trichocarpa HOM05D003377 ORTHO05D004080 2.9e-26 122.5 160 50.6
PGR142G1789 Punica granatum HOM05D003377 ORTHO05D004080 2.9e-26 122.5 88 67.0
Psat0s8147g0040 Pisum sativum HOM05D003377 ORTHO05D004080 6.4e-26 121.3 139 55.4
Carub.0003s0958 Capsella rubella HOM05D003377 ORTHO05D004080 1.1e-25 120.6 166 47.6
Psat4g175240 Pisum sativum HOM05D003377 ORTHO05D004080 1.1e-25 120.6 139 55.4
Sabra10G0175500 Salix brachista HOM05D003377 ORTHO05D004080 1.1e-25 120.6 84 71.4
Psat4g171760 Pisum sativum HOM05D003377 ORTHO05D004080 1.4e-25 120.2 138 56.5
Psat4g175200 Pisum sativum HOM05D003377 ORTHO05D004080 1.4e-25 120.2 139 54.7
Atru.chr12.849 Acer truncatum HOM05D003377 ORTHO05D004080 5.4e-25 118.2 129 53.5
Gorai.009G311000 Gossypium raimondii HOM05D003377 ORTHO05D004080 5.4e-25 118.2 88 64.8
AagrBONN_evm.TU.Sc2ySwM_344.2578 Anthoceros agrestis HOM05D003377 ORTHO05D004080 7.1e-25 117.9 107 59.8
Os09g0549500 Oryza sativa ssp. japonica HOM05D003377 ORTHO05D004080 2.7e-24 115.9 168 47.0
FAN03G0143 Fragaria x ananassa HOM05D003377 ORTHO05D004080 3.5e-24 115.5 81 69.1
FAN10G2046 Fragaria x ananassa HOM05D003377 ORTHO05D004080 3.5e-24 115.5 81 69.1
Lj3g0024929 Lotus japonicus HOM05D003377 ORTHO05D004080 4.6e-24 115.2 88 63.6
Psat4g174920 Pisum sativum HOM05D003377 ORTHO05D004080 6.0e-24 114.8 136 54.4
AT3G10400 Arabidopsis thaliana HOM05D003377 ORTHO05D004080 1.7e-23 113.2 133 50.4
CsaV3_UNG202600 Cucumis sativus L. HOM05D003377 ORTHO05D004080 2.3e-23 112.8 157 50.3
Psat0s5888g0040 Pisum sativum HOM05D003377 ORTHO05D004080 2.3e-23 112.8 138 53.6
Psat0s13123g0040 Pisum sativum HOM05D003377 ORTHO05D004080 5.1e-23 111.7 116 58.6
Psat0s4205g0120 Pisum sativum HOM05D003377 ORTHO05D004080 6.6e-23 111.3 116 58.6
Psat4g176160 Pisum sativum HOM05D003377 ORTHO05D004080 6.6e-23 111.3 137 53.3
Psat0s10619g0040 Pisum sativum HOM05D003377 ORTHO05D004080 1.1e-22 110.5 88 64.8
arahy.Tifrunner.gnm1.ann1.M0CEE4 Arachis hypogaea HOM05D003377 ORTHO05D004080 1.5e-22 110.2 81 63.0
CBR_g12926 Chara braunii HOM05D003377 ORTHO05D004080 1.5e-22 110.2 140 51.4
Psat0s6221g0040 Pisum sativum HOM05D003377 ORTHO05D004080 1.9e-22 109.8 136 52.2
Psat4g170320 Pisum sativum HOM05D003377 ORTHO05D004080 2.5e-22 109.4 108 58.3
Psat0s12985g0040 Pisum sativum HOM05D003377 ORTHO05D004080 4.3e-22 108.6 134 53.0
Psat4g171560 Pisum sativum HOM05D003377 ORTHO05D004080 4.3e-22 108.6 167 46.1
Psat4g188400 Pisum sativum HOM05D003377 ORTHO05D004080 4.3e-22 108.6 135 54.1
Psat0s7418g0040 Pisum sativum HOM05D003377 ORTHO05D004080 5.6e-22 108.2 116 56.9
Psat4g134240 Pisum sativum HOM05D003377 ORTHO05D004080 7.3e-22 107.8 108 58.3
Psat4g176880 Pisum sativum HOM05D003377 ORTHO05D004080 9.6e-22 107.5 129 55.0
Psat0s5383g0080 Pisum sativum HOM05D003377 ORTHO05D004080 1.6e-21 106.7 116 57.8
SMO365G0025 Selaginella moellendorffii HOM05D003377 ORTHO05D004080 4.8e-21 105.1 75 68.0
Psat4g171720 Pisum sativum HOM05D003377 ORTHO05D004080 6.2e-21 104.8 115 55.7
Oeu027950.1 Olea europaea HOM05D003377 ORTHO05D004080 1.4e-20 103.6 164 45.7
Psat0s3975g0080 Pisum sativum HOM05D003377 ORTHO05D004080 1.4e-20 103.6 116 55.2
Psat4g178080 Pisum sativum HOM05D003377 ORTHO05D004080 2.4e-20 102.8 116 56.0
Psat4g172280 Pisum sativum HOM05D003377 ORTHO05D004080 6.9e-20 101.3 115 53.9
Psat4g172240 Pisum sativum HOM05D003377 ORTHO05D004080 1.2e-19 100.5 135 51.9
Psat0s11115g0040 Pisum sativum HOM05D003377 ORTHO05D004080 2.9e-18 95.9 148 47.3
Psat0s5826g0040 Pisum sativum HOM05D003377 ORTHO05D004080 6.4e-18 94.7 167 44.3
Psat0s1397g0200 Pisum sativum HOM05D003377 ORTHO05D004080 2.1e-16 89.7 77 62.3
Psat0s12289g0040 Pisum sativum HOM05D003377 ORTHO05D004080 3.0e-15 85.9 74 59.5
CsaV3_UNG136030 Cucumis sativus L. HOM05D003377 ORTHO05D004080 1.1e-14 84.0 161 40.4
Psat0s1397g0160 Pisum sativum HOM05D003377 ORTHO05D004080 1.1e-14 84.0 134 43.3
GSVIVG01016177001 Vitis vinifera HOM05D003377 ORTHO05D004080 3.6e-13 79.0 140 40.7
Psat4g176120 Pisum sativum HOM05D003377 ORTHO05D004080 4.8e-13 78.6 138 44.9
Psat4g175080 Pisum sativum HOM05D003377 ORTHO05D004080 4.0e-12 75.5 92 52.2
CsaV3_UNG119960 Cucumis sativus L. HOM05D003377 ORTHO05D004080 6.9e-12 74.7 93 57.0
Psat4g130920 Pisum sativum HOM05D003377 ORTHO05D004080 2.0e-11 73.2 96 52.1
Psat0s5487g0040 Pisum sativum HOM05D003377 ORTHO05D004080 5.8e-11 71.6 138 43.5
AUR62001832 Chenopodium quinoa HOM05D000255 ORTHO05D001008 9.9e-11 70.9 53 67.9
Psat4g134320 Pisum sativum HOM05D003377 ORTHO05D004080 4.2e-09 65.5 79 55.7
Psat0s10712g0040 Pisum sativum HOM05D003377 ORTHO05D004080 5.5e-09 65.1 58 56.9
Psat0s3975g0040 Pisum sativum HOM05D003377 ORTHO05D004080 3.9e-07 58.9 141 38.3
Psat4g168920 Pisum sativum HOM05D003377 ORTHO05D004080 8.7e-07 57.8 133 36.1


User provided reference genes

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