Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2C221G5 Lonicera japonica HOM05D005550 ORTHO05D006679 1.4e-139 499.6 245 100.0
HanXRQChr06g0164431 Helianthus annuus HOM05D005550 ORTHO05D006679 3.5e-66 255.8 139 92.8
Hma1.2p1_1136F.1_g260510 Hydrangea macrophylla HOM05D005550 ORTHO05D006679 4.5e-66 255.4 139 91.4
Hma1.2p1_1136F.1_g260520 Hydrangea macrophylla HOM05D005550 ORTHO05D006679 4.5e-66 255.4 139 91.4
Haze_16325 Corylus avellana HOM05D005550 ORTHO05D006679 1.7e-65 253.4 139 89.9
Actinidia02146 Actinidia chinensis HOM05D005550 ORTHO05D006679 2.2e-65 253.1 139 90.6
ClCG01G004190 Citrullus lanatus HOM05D005550 ORTHO05D006679 3.8e-65 252.3 240 60.8
CANSAT21G2208 Cannabis sativa HOM05D005550 ORTHO05D006679 6.5e-65 251.5 139 89.9
QL12p011636 Quercus lobata HOM05D005550 ORTHO05D006679 1.1e-64 250.8 139 90.6
Sed0012504 Sechium edule HOM05D005550 ORTHO05D006679 1.1e-64 250.8 139 88.5
CiPaw.11G081300 Carya illinoinensis HOM05D005550 ORTHO05D006679 1.5e-64 250.4 241 59.3
GSVIVG01004726001 Vitis vinifera HOM05D005550 ORTHO05D006679 1.9e-64 250.0 139 90.6
Prupe.5G066100 Prunus persica HOM05D005550 ORTHO05D006679 3.2e-64 249.2 139 89.9
Thecc.03G248800 Theobroma cacao HOM05D005550 ORTHO05D006679 3.2e-64 249.2 139 87.1
TWI15G1253 Tripterygium wilfordii HOM05D005550 ORTHO05D006679 3.2e-64 249.2 139 89.2
Duzib068G0290 Durio zibethinus HOM05D005550 ORTHO05D006679 4.2e-64 248.8 139 87.8
CSS0014382 Camellia sinensis var. sinensis HOM05D005550 ORTHO05D006679 5.5e-64 248.4 139 89.2
COL.COLO4_37144 Corchorus olitorius HOM05D005550 ORTHO05D006679 5.5e-64 248.4 139 88.5
MBI04_g09523_MAGBIO Magnolia biondii HOM05D005550 ORTHO05D006679 5.5e-64 248.4 137 90.5
RcHm_v2.0_Chr7g0203731 Rosa chinensis HOM05D005550 ORTHO05D006679 5.5e-64 248.4 139 89.9
Lsat_1_v5_gn_3_1200 Lactuca sativa HOM05D005550 ORTHO05D006679 9.4e-64 247.7 140 90.7
Nitab4.5_0002225g0010 Nicotiana tabacum HOM05D005550 ORTHO05D006679 9.4e-64 247.7 139 89.2
Rhsim11G0009700 Rhododendron simsii HOM05D005550 ORTHO05D006679 9.4e-64 247.7 139 89.2
FvH4_5g19230 Fragaria vesca HOM05D005550 ORTHO05D006679 1.2e-63 247.3 139 89.2
FAN04G3230 Fragaria x ananassa HOM05D005550 ORTHO05D006679 1.2e-63 247.3 139 89.2
FAN08G0299 Fragaria x ananassa HOM05D005550 ORTHO05D006679 1.2e-63 247.3 139 89.2
Gorai.008G234100 Gossypium raimondii HOM05D005550 ORTHO05D006679 1.6e-63 246.9 139 87.1
ECA248G1640 Erigeron canadensis HOM05D005550 ORTHO05D006679 2.1e-63 246.5 140 90.0
PGR042G2104 Punica granatum HOM05D005550 ORTHO05D006679 2.1e-63 246.5 139 89.2
MSTRG.12114 Avicennia marina HOM05D005550 ORTHO05D006679 6.1e-63 245.0 139 87.8
Ciclev10018920m.g Citrus clementina HOM05D005550 ORTHO05D006679 6.1e-63 245.0 139 86.3
Migut.A01122 Erythranthe guttata HOM05D005550 ORTHO05D006679 6.1e-63 245.0 139 87.8
Gohir.D12G218532 Gossypium hirsutum HOM05D005550 ORTHO05D006679 6.1e-63 245.0 139 86.3
Atru.chr9.1288 Acer truncatum HOM05D005550 ORTHO05D006679 8.0e-63 244.6 139 87.8
Potri.001G156200 Populus trichocarpa HOM05D005550 ORTHO05D006679 1.4e-62 243.8 139 86.3
TAR375G0818 Trochodendron aralioides HOM05D005550 ORTHO05D006679 1.8e-62 243.4 139 87.8
Nn6g33903 Nelumbo nucifera HOM05D005550 ORTHO05D006679 2.3e-62 243.0 139 88.5
SGA_v2.0_scaffold104G30171 Striga asiatica HOM05D005550 ORTHO05D006679 2.3e-62 243.0 139 86.3
Nitab4.5_0000712g0130 Nicotiana tabacum HOM05D005550 ORTHO05D006679 6.8e-62 241.5 144 86.1
BcaB04g18410 Brassica carinata HOM05D005550 ORTHO05D006679 8.8e-62 241.1 240 56.7
unitig_744.g24475 Utricularia gibba HOM05D005550 ORTHO05D006679 8.8e-62 241.1 139 87.8
Cc08_g12230 Coffea canephora HOM05D005550 ORTHO05D006679 2.6e-61 239.6 137 86.1
Sopen08g003270 Solanum pennellii HOM05D005550 ORTHO05D006679 2.6e-61 239.6 139 85.6
Eucgr.E00409 Eucalyptus grandis HOM05D005550 ORTHO05D006679 4.4e-61 238.8 139 87.8
Solyc08g007330.3 Solanum lycopersicum HOM05D005550 ORTHO05D006679 7.5e-61 238.0 139 85.6
Sc22g0000960 Simmondsia chinensis HOM05D005550 ORTHO05D006679 9.8e-61 237.7 139 83.5
Aqoxy7G00819 Aquilegia oxysepala HOM05D005550 ORTHO05D006679 1.3e-60 237.3 138 86.2
FAN18G0162 Fragaria x ananassa HOM05D005550 ORTHO05D006679 2.2e-60 236.5 139 87.1
MELO3C005519.2 Cucumis melo HOM05D005550 ORTHO05D006679 2.8e-60 236.1 139 85.6
PSO063G2362 Papaver somniferum HOM05D005550 ORTHO05D006679 3.7e-60 235.7 144 84.0
Glyma.11G034600 Glycine max HOM05D005550 ORTHO05D006679 1.1e-59 234.2 139 80.6
PSO782G0795 Papaver somniferum HOM05D005550 ORTHO05D006679 1.1e-59 234.2 144 83.3
arahy.Tifrunner.gnm1.ann1.7NLF36 Arachis hypogaea HOM05D005550 ORTHO05D006679 1.8e-59 233.4 241 56.0
arahy.Tifrunner.gnm1.ann1.XE7N8H Arachis hypogaea HOM05D005550 ORTHO05D006679 1.8e-59 233.4 241 56.0
Sabra01G0134700 Salix brachista HOM05D005550 ORTHO05D006679 1.8e-59 233.4 139 82.0
Hund11605 Selenicereus undatus HOM05D005550 ORTHO05D006679 3.1e-59 232.6 139 82.0
EL10Ac5g12365 Beta vulgaris HOM05D005550 ORTHO05D006679 4.1e-59 232.3 139 84.9
CsaV3_5G004390 Cucumis sativus L. HOM05D005550 ORTHO05D006679 7.0e-59 231.5 133 85.7
BcaC07g38064 Brassica carinata HOM05D005550 ORTHO05D006679 9.1e-59 231.1 139 84.9
THA.LOC104812808 Tarenaya hassleriana HOM05D005550 ORTHO05D006679 9.1e-59 231.1 139 83.5
AL7G37330 Arabidopsis lyrata HOM05D005550 ORTHO05D006679 1.2e-58 230.7 139 84.2
AT4G17380 Arabidopsis thaliana HOM05D005550 ORTHO05D006679 1.2e-58 230.7 139 84.2
BolC8t48465H Brassica oleracea HOM05D005550 ORTHO05D006679 1.2e-58 230.7 139 84.2
Thhalv10024454m.g Eutrema salsugineum HOM05D005550 ORTHO05D006679 1.2e-58 230.7 139 84.2
Carub.0007s2403 Capsella rubella HOM05D005550 ORTHO05D006679 1.6e-58 230.3 139 83.5
AUR62019968 Chenopodium quinoa HOM05D005550 ORTHO05D006679 1.6e-58 230.3 139 83.5
BraA08t33293Z Brassica rapa HOM05D005550 ORTHO05D006679 3.5e-58 229.2 139 82.7
Phvul.002G057100 Phaseolus vulgaris HOM05D005550 ORTHO05D006679 3.5e-58 229.2 139 79.9
VMungo1215G0570 Vigna mungo HOM05D005550 ORTHO05D006679 3.5e-58 229.2 139 82.0
CARHR223990 Cardamine hirsuta HOM05D005550 ORTHO05D006679 4.5e-58 228.8 139 82.7
A08p13130 Brassica napus HOM05D005550 ORTHO05D006679 1.0e-57 227.6 139 82.7
AUR62007105 Chenopodium quinoa HOM05D005550 ORTHO05D006679 1.7e-57 226.9 139 82.7
Medtr5g012900 Medicago truncatula HOM05D005550 ORTHO05D006679 1.5e-56 223.8 139 78.4
Lj2g0021636 Lotus japonicus HOM05D005550 ORTHO05D006679 1.9e-56 223.4 139 77.0
Ca_24591_v3 Cicer arietinum L. HOM05D005550 ORTHO05D006679 7.2e-56 221.5 139 77.0
Os07g0486000 Oryza sativa ssp. japonica HOM05D005550 ORTHO05D006679 7.2e-56 221.5 134 81.3
SHI20465 Sapria himalayana HOM05D005550 ORTHO05D006679 1.2e-55 220.7 139 79.9
ATR0057G027 Amborella trichopoda HOM05D005550 ORTHO05D006679 3.6e-55 219.2 139 76.3
BolC8t48469H Brassica oleracea HOM05D005550 ORTHO05D006679 6.1e-55 218.4 131 83.2
TPR.G18117 Trifolium pratense HOM05D005550 ORTHO05D006679 1.4e-54 217.2 139 76.3
Psat2g176640 Pisum sativum HOM05D005550 ORTHO05D006679 3.0e-54 216.1 139 75.5
SalBow6G3355 Salvia bowleyana HOM05D005550 ORTHO05D006679 3.0e-54 216.1 169 68.6
Aa31LG6G120 Aethionema arabicum HOM05D005550 ORTHO05D006679 2.0e-53 213.4 255 52.2
vmacro00189 Vaccinium macrocarpon HOM05D005550 ORTHO05D006679 3.4e-53 212.6 119 89.1
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 7.8e-50 201.4 119 83.2
SEGI_18944 Sequoiadendron giganteum HOM05D005550 ORTHO05D006679 1.3e-49 200.7 136 73.5
Lalb_Chr16g0379511 Lupinus albus HOM05D005550 ORTHO05D006679 4.7e-47 192.2 152 67.1
HPP92_025386 Vanilla planifolia HOM05D005550 ORTHO05D006679 1.1e-43 181.0 117 76.9
Peaxi162Scf00102g01071 Petunia axillaris HOM05D005550 ORTHO05D006679 8.6e-41 171.4 117 77.8
Mapoly0001s0167 Marchantia polymorpha HOM05D005550 ORTHO05D006679 1.1e-38 164.5 140 58.6
Pp3c2_940 Physcomitrium patens HOM05D005550 ORTHO05D006679 1.5e-37 160.6 131 59.5
AagrBONN_evm.TU.Sc2ySwM_344.184 Anthoceros agrestis HOM05D005550 ORTHO05D006679 3.7e-36 156.0 139 52.5
Cpa.g.sc29.180 Carica papaya HOM05D005550 ORTHO05D006679 2.4e-35 153.3 92 80.4
BcaC07g38067 Brassica carinata HOM05D005550 ORTHO05D006679 4.1e-35 152.5 94 84.0
MD04G1062200 Malus domestica HOM05D005550 ORTHO05D006679 3.9e-33 146.0 80 87.5
DCAR_006840 Daucus carota HOM05D005550 ORTHO05D006679 9.5e-32 141.4 80 87.5
CDE04G2441 Ceratophyllum demersum HOM05D005550 ORTHO05D006679 6.4e-28 128.6 80 75.0
SMO340G0170 Selaginella moellendorffii HOM05D005550 ORTHO05D006679 1.6e-26 124.0 140 50.0
MBI06_g10737_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D011024 5.1e-17 92.4 52 80.8
Nn1g05728 Nelumbo nucifera HOM05D005550 ORTHO05D006679 9.0e-14 81.6 57 73.7
Nn1g05737 Nelumbo nucifera HOM05D005550 ORTHO05D006679 9.0e-14 81.6 57 73.7
MBI15_g30439_MAGBIO Magnolia biondii HOM05D005550 ORTHO05D011024 2.1e-10 70.5 40 85.0
MBI06_g16692_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D008292 1.7e-09 67.4 38 84.2
Potri.003G078601 Populus trichocarpa HOM05D005550 ORTHO05D006679 1.7e-09 67.4 38 86.8
PRCOL_00003604 Prasinoderma coloniale HOM05D005550 ORTHO05D006679 5.1e-09 65.9 131 37.4
CBR_g547 Chara braunii HOM05D005550 ORTHO05D006679 4.0e-06 56.2 110 38.2


User provided reference genes

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