Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr12g0205491 Lupinus albus HOM05D004465 ORTHO05D005450 3.0e-182 641.7 329 100.0
Lalb_Chr21g0313041 Lupinus albus HOM05D004465 ORTHO05D005450 4.8e-172 607.8 329 95.1
Glyma.19G152700 Glycine max HOM05D004465 ORTHO05D005450 2.7e-154 548.9 329 84.5
Medtr4g121550 Medicago truncatula HOM05D004465 ORTHO05D005450 1.7e-153 546.2 329 83.6
Ca_09695_v3 Cicer arietinum L. HOM05D004465 ORTHO05D005450 2.3e-153 545.8 329 83.0
VMungo1383G2558 Vigna mungo HOM05D004465 ORTHO05D005450 3.8e-153 545.0 329 84.5
Lj1g0001578 Lotus japonicus HOM05D004465 ORTHO05D005450 1.1e-152 543.5 329 83.0
Phvul.001G147600 Phaseolus vulgaris HOM05D004465 ORTHO05D005450 2.3e-150 535.8 329 83.0
arahy.Tifrunner.gnm1.ann1.CV9AIL Arachis hypogaea HOM05D004465 ORTHO05D005450 3.0e-150 535.4 329 82.1
arahy.Tifrunner.gnm1.ann1.N9UI87 Arachis hypogaea HOM05D004465 ORTHO05D005450 4.0e-150 535.0 329 81.8
Psat4g023240 Pisum sativum HOM05D004465 ORTHO05D005450 8.8e-150 533.9 329 82.7
Cfa006082 Carpinus fangiana HOM05D004465 ORTHO05D005450 1.3e-140 503.4 326 77.0
CiPaw.08G102200 Carya illinoinensis HOM05D004465 ORTHO05D005450 3.0e-137 492.3 327 74.6
Haze_04767 Corylus avellana HOM05D004465 ORTHO05D005450 3.6e-135 485.3 353 70.8
TAR633G0251 Trochodendron aralioides HOM05D004465 ORTHO05D005450 3.6e-135 485.3 330 71.5
CSS0050172 Camellia sinensis var. sinensis HOM05D004465 ORTHO05D005450 1.1e-134 483.8 329 72.6
CSS0023645 Camellia sinensis var. sinensis HOM05D004465 ORTHO05D005450 1.4e-134 483.4 329 72.6
CANSAT25G0403 Cannabis sativa HOM05D004465 ORTHO05D005450 4.0e-134 481.9 329 73.3
Prupe.8G247600 Prunus persica HOM05D004465 ORTHO05D005450 4.0e-134 481.9 327 72.5
vmacro02540 Vaccinium macrocarpon HOM05D004465 ORTHO05D005450 5.8e-133 478.0 329 72.3
RcHm_v2.0_Chr6g0291951 Rosa chinensis HOM05D004465 ORTHO05D005450 9.8e-133 477.2 329 72.0
Migut.D00252 Erythranthe guttata HOM05D004465 ORTHO05D005450 3.7e-132 475.3 330 72.7
Sed0001639 Sechium edule HOM05D004465 ORTHO05D005450 4.9e-132 474.9 328 71.0
FAN20G2589 Fragaria x ananassa HOM05D004465 ORTHO05D005450 8.3e-132 474.2 329 70.5
Aqoxy2G03197 Aquilegia oxysepala HOM05D004465 ORTHO05D005450 1.1e-131 473.8 332 70.2
FAN15G3052 Fragaria x ananassa HOM05D004465 ORTHO05D005450 1.4e-131 473.4 329 70.5
PGR119G1155 Punica granatum HOM05D004465 ORTHO05D005450 3.2e-131 472.2 327 70.0
Actinidia24311 Actinidia chinensis HOM05D004465 ORTHO05D005450 4.1e-131 471.9 328 71.6
FAN24G2543 Fragaria x ananassa HOM05D004465 ORTHO05D005450 9.2e-131 470.7 329 70.5
Lju41A26G23 Lonicera japonica HOM05D004465 ORTHO05D005450 9.2e-131 470.7 323 70.9
FvH4_2g24140 Fragaria vesca HOM05D004465 ORTHO05D005450 1.6e-130 469.9 329 70.5
ClCG04G004880 Citrullus lanatus HOM05D004465 ORTHO05D005450 3.5e-130 468.8 328 70.7
Hma1.2p1_0628F.1_g191790 Hydrangea macrophylla HOM05D004465 ORTHO05D005450 7.8e-130 467.6 346 67.6
FAN27G1503 Fragaria x ananassa HOM05D004465 ORTHO05D005450 1.7e-129 466.5 329 69.3
MSTRG.21585 Avicennia marina HOM05D004465 ORTHO05D005450 5.0e-129 464.9 330 70.9
Eucgr.H01542 Eucalyptus grandis HOM05D004465 ORTHO05D005450 5.0e-129 464.9 327 68.2
MELO3C008880.2 Cucumis melo HOM05D004465 ORTHO05D005450 1.5e-128 463.4 328 70.1
CsaV3_4G031760 Cucumis sativus L. HOM05D004465 ORTHO05D005450 1.5e-128 463.4 329 69.9
MD11G1292000 Malus domestica HOM05D004465 ORTHO05D005450 1.5e-128 463.4 327 69.4
Nn1g08362 Nelumbo nucifera HOM05D004465 ORTHO05D005450 2.5e-128 462.6 330 69.1
Psat3g002760 Pisum sativum HOM05D004465 ORTHO05D005450 2.8e-127 459.1 324 72.2
HanXRQChr15g0466601 Helianthus annuus HOM05D004465 ORTHO05D005450 4.7e-127 458.4 332 70.8
TWI14G0547 Tripterygium wilfordii HOM05D004465 ORTHO05D005450 1.8e-126 456.4 331 69.2
Cc04_g13300 Coffea canephora HOM05D004465 ORTHO05D005450 6.8e-126 454.5 332 69.0
SalBow3G2805 Salvia bowleyana HOM05D004465 ORTHO05D005450 3.4e-125 452.2 361 65.4
Dinv32970 Davidia involucrata HOM05D004465 ORTHO05D005450 5.8e-125 451.4 294 75.2
TPR.G11548 Trifolium pratense HOM05D004465 ORTHO05D005450 1.3e-124 450.3 329 72.0
Lsat_1_v5_gn_2_2880 Lactuca sativa HOM05D004465 ORTHO05D005450 2.9e-124 449.1 325 70.2
COL.COLO4_22372 Corchorus olitorius HOM05D004465 ORTHO05D005450 8.3e-124 447.6 329 68.7
GSVIVG01011064001 Vitis vinifera HOM05D004465 ORTHO05D005450 1.4e-123 446.8 329 67.8
MELO3C026181.2 Cucumis melo HOM05D004465 ORTHO05D005450 4.1e-123 445.3 328 67.4
QL02p002453 Quercus lobata HOM05D004465 ORTHO05D005450 4.1e-123 445.3 400 60.8
unitig_0.g1195 Utricularia gibba HOM05D004465 ORTHO05D005450 4.1e-123 445.3 330 68.5
Gohir.A10G082900 Gossypium hirsutum HOM05D004465 ORTHO05D005450 5.4e-123 444.9 329 69.6
Gohir.D10G105100 Gossypium hirsutum HOM05D004465 ORTHO05D005450 2.1e-122 443.0 329 69.6
Thecc.01G117300 Theobroma cacao HOM05D004465 ORTHO05D005450 2.1e-122 443.0 329 68.1
Oeu006227.1 Olea europaea HOM05D004465 ORTHO05D005450 1.0e-121 440.7 364 63.7
Nitab4.5_0001323g0060 Nicotiana tabacum HOM05D004465 ORTHO05D005450 3.9e-121 438.7 332 68.1
Manes.17G011600 Manihot esculenta HOM05D004465 ORTHO05D005450 6.6e-121 438.0 331 68.6
Potri.003G194400 Populus trichocarpa HOM05D004465 ORTHO05D005450 3.3e-120 435.6 329 67.8
Ciclev10021133m.g Citrus clementina HOM05D004465 ORTHO05D005450 4.3e-120 435.3 330 67.9
PSO302G0160 Papaver somniferum HOM05D004465 ORTHO05D005450 4.3e-120 435.3 330 63.6
PSO170G6090 Papaver somniferum HOM05D004465 ORTHO05D005450 1.2e-119 433.7 330 63.9
Atru.chr5.1333 Acer truncatum HOM05D004465 ORTHO05D005450 2.8e-119 432.6 330 66.7
Gohir.A11G223700 Gossypium hirsutum HOM05D004465 ORTHO05D005450 2.8e-119 432.6 329 66.0
Nitab4.5_0002927g0060 Nicotiana tabacum HOM05D004465 ORTHO05D005450 4.7e-119 431.8 332 66.9
Psat4g225440 Pisum sativum HOM05D004465 ORTHO05D005450 6.2e-119 431.4 327 68.5
Cpa.g.sc9.125 Carica papaya HOM05D004465 ORTHO05D005450 8.1e-119 431.0 330 66.1
Gorai.002G150000 Gossypium raimondii HOM05D004465 ORTHO05D005450 8.1e-119 431.0 329 66.0
Sabra03G0145100 Salix brachista HOM05D004465 ORTHO05D005450 1.8e-118 429.9 329 66.6
Hund26620 Selenicereus undatus HOM05D004465 ORTHO05D005450 1.8e-118 429.9 329 66.9
THA.LOC104815950 Tarenaya hassleriana HOM05D004465 ORTHO05D005450 1.8e-118 429.9 320 66.6
Lsat_1_v5_gn_9_1881 Lactuca sativa HOM05D004465 ORTHO05D005450 4.0e-118 428.7 329 66.9
Gohir.D11G226800 Gossypium hirsutum HOM05D004465 ORTHO05D005450 5.2e-118 428.3 329 65.3
Duzib147G0102 Durio zibethinus HOM05D004465 ORTHO05D005450 1.5e-117 426.8 328 67.1
Solyc09g074090.3 Solanum lycopersicum HOM05D004465 ORTHO05D005450 2.0e-117 426.4 332 66.3
CAN.G956.9 Capsicum annuum HOM05D004465 ORTHO05D005450 3.4e-117 425.6 332 65.1
PGSC0003DMG400003807 Solanum tuberosum HOM05D004465 ORTHO05D005450 5.8e-117 424.9 332 65.4
MBI19_g15845_MAGBIO Magnolia biondii HOM05D004465 ORTHO05D005450 9.9e-117 424.1 320 66.6
Sopen09g028910 Solanum pennellii HOM05D004465 ORTHO05D005450 1.3e-116 423.7 332 65.7
Peaxi162Scf00941g00114 Petunia axillaris HOM05D004465 ORTHO05D005450 3.8e-116 422.2 327 66.1
Oeu047890.1 Olea europaea HOM05D004465 ORTHO05D005450 2.4e-115 419.5 331 67.1
Rhsim13G0021500 Rhododendron simsii HOM05D004465 ORTHO05D005450 4.1e-115 418.7 276 73.9
CDE05G1996 Ceratophyllum demersum HOM05D004465 ORTHO05D005450 2.1e-114 416.4 338 63.0
Aa31LG3G11130 Aethionema arabicum HOM05D004465 ORTHO05D005450 5.1e-113 411.8 328 61.6
AT1G03360 Arabidopsis thaliana HOM05D004465 ORTHO05D005450 8.7e-113 411.0 328 62.8
CARHR002730 Cardamine hirsuta HOM05D004465 ORTHO05D005450 1.1e-112 410.6 329 62.9
Carub.0001s0248 Capsella rubella HOM05D004465 ORTHO05D005450 1.5e-112 410.2 328 62.8
Aa31LG1G9210 Aethionema arabicum HOM05D004465 ORTHO05D005450 3.6e-111 405.6 338 60.4
Sc14g0002440 Simmondsia chinensis HOM05D004465 ORTHO05D005450 4.7e-111 405.2 321 63.6
Thhalv10008200m.g Eutrema salsugineum HOM05D004465 ORTHO05D005450 8.1e-111 404.4 328 62.2
AL1G12880 Arabidopsis lyrata HOM05D004465 ORTHO05D005450 1.8e-110 403.3 320 62.8
Os04g0520000 Oryza sativa ssp. japonica HOM05D004465 ORTHO05D005450 2.4e-110 402.9 322 64.3
BraA10t42464Z Brassica rapa HOM05D004465 ORTHO05D005450 3.1e-110 402.5 330 61.5
A10p01910 Brassica napus HOM05D004465 ORTHO05D005450 4.0e-110 402.1 330 61.8
Duzib264G0721 Durio zibethinus HOM05D004465 ORTHO05D005450 2.6e-109 399.4 329 63.8
Sp1g02360 Schrenkiella parvula HOM05D004465 ORTHO05D005450 3.4e-109 399.1 320 61.6
BolC5t28966H Brassica oleracea HOM05D004465 ORTHO05D005450 7.6e-109 397.9 330 61.2
AUR62025039 Chenopodium quinoa HOM05D004465 ORTHO05D005450 7.6e-109 397.9 326 63.5
Zm00001eb067490 Zea mays HOM05D004465 ORTHO05D005450 4.9e-108 395.2 315 63.2
BcaC05g24540 Brassica carinata HOM05D004465 ORTHO05D005450 6.4e-108 394.8 328 60.4
Gorai.011G114800 Gossypium raimondii HOM05D004465 ORTHO05D005450 4.2e-107 392.1 329 63.8
ECA247G0279 Erigeron canadensis HOM05D004465 ORTHO05D005450 4.0e-102 375.6 274 67.5
Medtr2g093790 Medicago truncatula HOM05D004465 ORTHO05D005450 1.7e-100 370.2 325 61.5
SEGI_29460 Sequoiadendron giganteum HOM05D004465 ORTHO05D005450 1.6e-98 363.6 327 56.9
ATR0626G226 Amborella trichopoda HOM05D004465 ORTHO05D005450 3.5e-98 362.5 327 58.4
Ah.01g002340 Amaranthus hybridus HOM05D004465 ORTHO05D005450 1.0e-97 360.9 329 59.3
HPP92_017959 Vanilla planifolia HOM05D004465 ORTHO05D005450 1.1e-88 330.9 323 54.5
EL10Ac9g22404 Beta vulgaris HOM05D004465 ORTHO05D005450 1.6e-87 327.0 327 57.2
Actinidia00724 Actinidia chinensis HOM05D004465 ORTHO05D005450 2.2e-84 316.6 327 53.5
BcaC05g24533 Brassica carinata HOM05D001540 ORTHO05D001520 6.5e-84 315.1 321 52.3
Lj1A45T35 Lonicera japonica HOM05D004465 ORTHO05D005450 3.2e-83 312.8 276 58.7
Carub.0002s0706 Capsella rubella HOM05D004465 ORTHO05D005450 5.5e-83 312.0 325 52.0
BcaC05g24537 Brassica carinata HOM05D004465 ORTHO05D005450 1.5e-80 303.9 330 52.1
AL1G67150 Arabidopsis lyrata HOM05D004465 ORTHO05D005450 6.3e-79 298.5 324 51.9
Mapoly0036s0012 Marchantia polymorpha HOM05D004465 ORTHO05D005450 2.9e-76 289.7 322 47.2
MD03G1271400 Malus domestica HOM05D004465 ORTHO05D005450 1.4e-73 280.8 177 75.7
SGA_v2.0_scaffold1G00438 Striga asiatica HOM05D004465 ORTHO05D005450 1.1e-72 277.7 199 70.4
Prupe.8G248900 Prunus persica HOM05D004465 ORTHO05D005450 9.1e-70 268.1 185 71.4
Pp3c3_30640 Physcomitrium patens HOM05D004465 ORTHO05D005450 2.0e-69 266.9 322 44.4
SMO351G0040 Selaginella moellendorffii HOM05D004465 ORTHO05D005450 7.4e-64 248.4 286 43.7
ClCG06G018160 Citrullus lanatus HOM05D004465 ORTHO05D005450 1.7e-63 247.3 327 45.9
Psat5g228640 Pisum sativum HOM05D004465 ORTHO05D005450 1.3e-60 237.7 142 82.4
AUR62006496 Chenopodium quinoa HOM05D004465 ORTHO05D005450 5.5e-59 232.3 197 62.4
CDE07G1085 Ceratophyllum demersum HOM05D004465 ORTHO05D005450 3.6e-58 229.6 213 57.3
Cre12.g496450 Chlamydomonas reinhardtii HOM05D004465 ORTHO05D005450 2.4e-54 216.9 305 38.7
CARHR054740 Cardamine hirsuta HOM05D004465 ORTHO05D005450 5.3e-54 215.7 329 41.6
SHI31135 Sapria himalayana HOM05D000023 ORTHO05D000014 7.0e-54 215.3 271 46.9
Cc00_g20190 Coffea canephora HOM05D004465 ORTHO05D005450 3.5e-53 213.0 158 66.5
TPR.G23233 Trifolium pratense HOM05D004465 ORTHO05D005450 5.0e-52 209.1 132 81.8
C05p01850 Brassica napus HOM05D004465 ORTHO05D005450 1.5e-48 197.6 183 54.6
CANSAT25G2682 Cannabis sativa HOM05D004465 ORTHO05D005450 2.6e-48 196.8 134 72.4
Glyma.03G149702 Glycine max HOM05D004465 ORTHO05D005450 4.8e-47 192.6 117 77.8
QL11p055012 Quercus lobata HOM05D004465 ORTHO05D005450 5.9e-45 185.7 116 76.7
DCAR_018396 Daucus carota HOM05D004465 ORTHO05D005450 2.2e-44 183.7 151 64.9
SHI31141 Sapria himalayana HOM05D004465 ORTHO05D000001 8.5e-44 181.8 145 61.4
MCO01G628 Micromonas commoda HOM05D004465 ORTHO05D005450 1.6e-42 177.6 265 40.4
AUR62006497 Chenopodium quinoa HOM05D004465 ORTHO05D005450 2.1e-42 177.2 132 66.7
Lsat_1_v5_gn_2_2860 Lactuca sativa HOM05D004465 ORTHO05D005450 7.5e-40 168.7 129 68.2
Nitab4.5_0006227g0010 Nicotiana tabacum HOM05D004465 ORTHO05D005450 2.2e-39 167.2 182 50.5
Haze_26173 Corylus avellana HOM05D004465 ORTHO05D005450 1.3e-36 157.9 264 37.5
Cfa025641 Carpinus fangiana HOM05D004465 ORTHO05D005450 2.3e-36 157.1 262 33.6
CsaV3_1G000270 Cucumis sativus L. HOM05D004465 ORTHO05D005450 4.7e-34 149.4 142 52.8
CBR_g31328 Chara braunii HOM05D004465 ORTHO05D000048 1.5e-32 144.4 197 41.1
Glyma.17G181200 Glycine max HOM05D004465 ORTHO05D005450 1.3e-31 141.4 81 81.5
CARHR054000 Cardamine hirsuta HOM05D004465 ORTHO05D005450 1.7e-31 141.0 139 49.6
Zm00001eb148160 Zea mays HOM05D004465 ORTHO05D005450 4.5e-29 132.9 137 51.1
CARHR120580 Cardamine hirsuta HOM05D004465 ORTHO05D005450 5.0e-28 129.4 217 38.2
CARHR054010 Cardamine hirsuta HOM05D004465 ORTHO05D005450 8.6e-28 128.6 147 45.6
PRCOL_00003283 Prasinoderma coloniale HOM05D004465 ORTHO05D005450 7.3e-27 125.6 176 40.9
CBR_g31324 Chara braunii HOM05D004465 ORTHO05D000002 2.1e-26 124.0 132 45.5
TPR.G16860 Trifolium pratense HOM05D004465 ORTHO05D005450 6.8e-25 119.0 68 88.2
QL09p052305 Quercus lobata HOM05D004465 ORTHO05D005450 2.0e-24 117.5 195 40.5
MBI19_g08244_MAGBIO Magnolia biondii HOM05D004465 ORTHO05D005450 1.4e-22 111.3 112 48.2
BcaC07g36969 Brassica carinata HOM05D004465 ORTHO05D005450 2.4e-14 84.0 76 55.3
C08p00550 Brassica napus HOM05D004465 ORTHO05D005450 2.4e-14 84.0 76 55.3
BolC8t46855H Brassica oleracea HOM05D004465 ORTHO05D005450 9.2e-14 82.0 76 53.9
QL09p051599 Quercus lobata HOM05D004465 ORTHO05D005450 9.2e-14 82.0 59 72.9
BraA08t35634Z Brassica rapa HOM05D004465 ORTHO05D005450 2.3e-12 77.4 126 41.3
BcaC07g36966 Brassica carinata HOM05D004465 ORTHO05D005450 4.0e-09 66.6 60 56.7
A08p37370 Brassica napus HOM05D004465 ORTHO05D005450 5.8e-08 62.8 56 57.1


User provided reference genes

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