Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11605 Selenicereus undatus HOM05D005550 ORTHO05D006679 1.1e-162 576.6 299 100.0
AUR62019968 Chenopodium quinoa HOM05D005550 ORTHO05D006679 2.6e-140 502.3 298 88.3
AUR62007105 Chenopodium quinoa HOM05D005550 ORTHO05D006679 3.7e-139 498.4 298 87.9
CiPaw.11G081300 Carya illinoinensis HOM05D005550 ORTHO05D006679 3.5e-137 491.9 298 82.6
Rhsim11G0009700 Rhododendron simsii HOM05D005550 ORTHO05D006679 1.7e-136 489.6 298 82.6
Thecc.03G248800 Theobroma cacao HOM05D005550 ORTHO05D006679 4.7e-134 481.5 334 74.9
CSS0014382 Camellia sinensis var. sinensis HOM05D005550 ORTHO05D006679 8.1e-134 480.7 334 75.1
QL12p011636 Quercus lobata HOM05D005550 ORTHO05D006679 1.1e-133 480.3 334 75.1
Actinidia02146 Actinidia chinensis HOM05D005550 ORTHO05D006679 1.8e-133 479.6 334 74.6
Sc22g0000960 Simmondsia chinensis HOM05D005550 ORTHO05D006679 2.4e-133 479.2 334 75.4
Sed0012504 Sechium edule HOM05D005550 ORTHO05D006679 2.6e-132 475.7 334 73.7
Hma1.2p1_1136F.1_g260510 Hydrangea macrophylla HOM05D005550 ORTHO05D006679 7.6e-132 474.2 334 74.6
Hma1.2p1_1136F.1_g260520 Hydrangea macrophylla HOM05D005550 ORTHO05D006679 7.6e-132 474.2 334 74.6
Ciclev10018920m.g Citrus clementina HOM05D005550 ORTHO05D006679 1.3e-131 473.4 334 73.1
Atru.chr9.1288 Acer truncatum HOM05D005550 ORTHO05D006679 2.2e-131 472.6 334 74.3
RcHm_v2.0_Chr7g0203731 Rosa chinensis HOM05D005550 ORTHO05D006679 6.4e-131 471.1 334 73.1
Aqoxy7G00819 Aquilegia oxysepala HOM05D005550 ORTHO05D006679 1.1e-130 470.3 335 73.7
Gohir.D12G218532 Gossypium hirsutum HOM05D005550 ORTHO05D006679 2.4e-130 469.2 334 72.5
Gorai.008G234100 Gossypium raimondii HOM05D005550 ORTHO05D006679 3.2e-130 468.8 334 72.5
Migut.A01122 Erythranthe guttata HOM05D005550 ORTHO05D006679 4.1e-130 468.4 334 73.7
CANSAT21G2208 Cannabis sativa HOM05D005550 ORTHO05D006679 7.1e-130 467.6 338 71.9
Duzib068G0290 Durio zibethinus HOM05D005550 ORTHO05D006679 7.1e-130 467.6 334 72.8
FvH4_5g19230 Fragaria vesca HOM05D005550 ORTHO05D006679 1.6e-129 466.5 334 72.5
FAN04G3230 Fragaria x ananassa HOM05D005550 ORTHO05D006679 1.6e-129 466.5 343 71.1
TAR375G0818 Trochodendron aralioides HOM05D005550 ORTHO05D006679 3.5e-129 465.3 332 72.6
PSO063G2362 Papaver somniferum HOM05D005550 ORTHO05D006679 6.0e-129 464.5 338 72.8
ECA248G1640 Erigeron canadensis HOM05D005550 ORTHO05D006679 7.8e-129 464.2 333 73.0
arahy.Tifrunner.gnm1.ann1.7NLF36 Arachis hypogaea HOM05D005550 ORTHO05D006679 1.3e-128 463.4 298 77.9
HanXRQChr06g0164431 Helianthus annuus HOM05D005550 ORTHO05D006679 1.7e-128 463.0 334 72.2
Cc08_g12230 Coffea canephora HOM05D005550 ORTHO05D006679 2.3e-128 462.6 332 72.9
COL.COLO4_37144 Corchorus olitorius HOM05D005550 ORTHO05D006679 3.0e-128 462.2 344 70.6
Glyma.11G034600 Glycine max HOM05D005550 ORTHO05D006679 5.1e-128 461.5 334 70.1
Prupe.5G066100 Prunus persica HOM05D005550 ORTHO05D006679 5.1e-128 461.5 334 71.6
MBI04_g09523_MAGBIO Magnolia biondii HOM05D005550 ORTHO05D006679 1.1e-127 460.3 344 72.1
Potri.001G156200 Populus trichocarpa HOM05D005550 ORTHO05D006679 1.5e-127 459.9 334 71.3
SGA_v2.0_scaffold104G30171 Striga asiatica HOM05D005550 ORTHO05D006679 4.3e-127 458.4 334 71.6
Sabra01G0134700 Salix brachista HOM05D005550 ORTHO05D006679 5.6e-127 458.0 298 77.5
arahy.Tifrunner.gnm1.ann1.XE7N8H Arachis hypogaea HOM05D005550 ORTHO05D006679 7.3e-127 457.6 306 75.5
MSTRG.12114 Avicennia marina HOM05D005550 ORTHO05D006679 7.3e-127 457.6 334 72.2
PSO782G0795 Papaver somniferum HOM05D005550 ORTHO05D006679 9.6e-127 457.2 329 73.3
TWI15G1253 Tripterygium wilfordii HOM05D005550 ORTHO05D006679 9.6e-127 457.2 334 71.9
Sopen08g003270 Solanum pennellii HOM05D005550 ORTHO05D006679 1.6e-126 456.4 334 72.5
Carub.0007s2403 Capsella rubella HOM05D005550 ORTHO05D006679 2.8e-126 455.7 334 71.3
MELO3C005519.2 Cucumis melo HOM05D005550 ORTHO05D006679 3.6e-126 455.3 334 71.9
THA.LOC104812808 Tarenaya hassleriana HOM05D005550 ORTHO05D006679 3.6e-126 455.3 334 71.0
Eucgr.E00409 Eucalyptus grandis HOM05D005550 ORTHO05D006679 1.4e-125 453.4 334 71.9
PGR042G2104 Punica granatum HOM05D005550 ORTHO05D006679 1.4e-125 453.4 334 71.3
AT4G17380 Arabidopsis thaliana HOM05D005550 ORTHO05D006679 1.8e-125 453.0 334 70.7
CsaV3_5G004390 Cucumis sativus L. HOM05D005550 ORTHO05D006679 2.4e-125 452.6 334 71.6
Thhalv10024454m.g Eutrema salsugineum HOM05D005550 ORTHO05D006679 2.4e-125 452.6 334 71.0
Solyc08g007330.3 Solanum lycopersicum HOM05D005550 ORTHO05D006679 2.4e-125 452.6 334 72.2
Ca_24591_v3 Cicer arietinum L. HOM05D005550 ORTHO05D006679 3.1e-125 452.2 334 70.1
Phvul.002G057100 Phaseolus vulgaris HOM05D005550 ORTHO05D006679 3.1e-125 452.2 334 68.9
Psat2g176640 Pisum sativum HOM05D005550 ORTHO05D006679 3.1e-125 452.2 334 69.2
Nn6g33903 Nelumbo nucifera HOM05D005550 ORTHO05D006679 6.9e-125 451.1 332 70.8
Nitab4.5_0002225g0010 Nicotiana tabacum HOM05D005550 ORTHO05D006679 6.9e-125 451.1 334 71.3
AL7G37330 Arabidopsis lyrata HOM05D005550 ORTHO05D006679 9.0e-125 450.7 334 70.1
ClCG01G004190 Citrullus lanatus HOM05D005550 ORTHO05D006679 9.0e-125 450.7 352 69.0
Lsat_1_v5_gn_3_1200 Lactuca sativa HOM05D005550 ORTHO05D006679 1.5e-124 449.9 336 71.4
Medtr5g012900 Medicago truncatula HOM05D005550 ORTHO05D006679 2.0e-124 449.5 334 69.2
TPR.G18117 Trifolium pratense HOM05D005550 ORTHO05D006679 9.9e-124 447.2 334 68.9
BcaC07g38064 Brassica carinata HOM05D005550 ORTHO05D006679 1.3e-123 446.8 334 69.8
Lj2g0021636 Lotus japonicus HOM05D005550 ORTHO05D006679 1.3e-123 446.8 334 68.9
CARHR223990 Cardamine hirsuta HOM05D005550 ORTHO05D006679 1.7e-123 446.4 334 69.2
VMungo1215G0570 Vigna mungo HOM05D005550 ORTHO05D006679 2.9e-123 445.7 334 68.6
BolC8t48465H Brassica oleracea HOM05D005550 ORTHO05D006679 4.9e-123 444.9 334 69.5
BraA08t33293Z Brassica rapa HOM05D005550 ORTHO05D006679 1.1e-122 443.7 334 69.2
A08p13130 Brassica napus HOM05D005550 ORTHO05D006679 5.4e-122 441.4 334 68.9
FAN08G0299 Fragaria x ananassa HOM05D005550 ORTHO05D006679 2.1e-121 439.5 334 69.2
FAN18G0162 Fragaria x ananassa HOM05D005550 ORTHO05D006679 5.1e-120 434.9 334 69.8
SalBow6G3355 Salvia bowleyana HOM05D005550 ORTHO05D006679 1.9e-119 433.0 364 64.6
BcaB04g18410 Brassica carinata HOM05D005550 ORTHO05D006679 5.6e-119 431.4 363 65.0
ATR0057G027 Amborella trichopoda HOM05D005550 ORTHO05D006679 3.1e-117 425.6 334 65.9
Aa31LG6G120 Aethionema arabicum HOM05D005550 ORTHO05D006679 1.2e-116 423.7 375 62.1
Lalb_Chr16g0379511 Lupinus albus HOM05D005550 ORTHO05D006679 1.5e-116 423.3 347 65.4
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 4.5e-116 421.8 314 74.2
SHI20465 Sapria himalayana HOM05D005550 ORTHO05D006679 8.4e-115 417.5 344 64.2
EL10Ac5g12365 Beta vulgaris HOM05D005550 ORTHO05D006679 1.6e-110 403.3 334 68.3
Nitab4.5_0000712g0130 Nicotiana tabacum HOM05D005550 ORTHO05D006679 4.8e-110 401.7 355 63.9
HPP92_025386 Vanilla planifolia HOM05D005550 ORTHO05D006679 9.3e-106 387.5 313 64.9
MD04G1062200 Malus domestica HOM05D005550 ORTHO05D006679 4.0e-101 372.1 275 69.5
vmacro00189 Vaccinium macrocarpon HOM05D005550 ORTHO05D006679 1.3e-99 367.1 435 51.7
Peaxi162Scf00102g01071 Petunia axillaris HOM05D005550 ORTHO05D006679 2.9e-99 365.9 312 65.7
DCAR_006840 Daucus carota HOM05D005550 ORTHO05D006679 1.9e-98 363.2 275 69.1
Mapoly0001s0167 Marchantia polymorpha HOM05D005550 ORTHO05D006679 1.8e-85 320.1 324 53.7
Pp3c2_940 Physcomitrium patens HOM05D005550 ORTHO05D006679 1.1e-79 300.8 325 50.5
Os07g0486000 Oryza sativa ssp. japonica HOM05D005550 ORTHO05D006679 1.3e-78 297.4 228 68.9
AagrBONN_evm.TU.Sc2ySwM_344.184 Anthoceros agrestis HOM05D005550 ORTHO05D006679 3.1e-77 292.7 330 47.6
SMO340G0170 Selaginella moellendorffii HOM05D005550 ORTHO05D006679 2.2e-70 270.0 335 43.6
unitig_744.g24475 Utricularia gibba HOM05D005550 ORTHO05D006679 7.2e-66 255.0 156 82.7
Haze_16325 Corylus avellana HOM05D005550 ORTHO05D006679 1.7e-59 233.8 143 81.1
GSVIVG01004726001 Vitis vinifera HOM05D005550 ORTHO05D006679 1.7e-59 233.8 140 83.6
Lj2C221G5 Lonicera japonica HOM05D005550 ORTHO05D006679 1.9e-58 230.3 139 82.0
CDE04G2441 Ceratophyllum demersum HOM05D005550 ORTHO05D006679 3.4e-55 219.5 209 59.8
Lj2A221T32 Lonicera japonica HOM05D005550 ORTHO05D006679 1.4e-53 214.2 127 85.0
Gohir.A12G215932 Gossypium hirsutum HOM05D005550 ORTHO05D006679 1.3e-51 207.6 127 81.9
GSVIVG01004727001 Vitis vinifera HOM05D005550 ORTHO05D006679 1.3e-51 207.6 127 81.9
BolC8t48469H Brassica oleracea HOM05D005550 ORTHO05D006679 6.6e-51 205.3 131 77.1
SEGI_18944 Sequoiadendron giganteum HOM05D005550 ORTHO05D006679 6.8e-48 195.3 136 72.1
Zm00001eb105070 Zea mays HOM05D005550 ORTHO05D006679 7.0e-45 185.3 127 72.4
Manes.01G082400 Manihot esculenta HOM05D005550 ORTHO05D006679 2.3e-35 153.7 99 75.8
Cpa.g.sc29.182 Carica papaya HOM05D005550 ORTHO05D006679 3.0e-35 153.3 99 77.8
CAN.G1227.20 Capsicum annuum HOM05D005550 ORTHO05D006679 1.6e-33 147.5 99 74.7
BcaC07g38067 Brassica carinata HOM05D005550 ORTHO05D006679 4.0e-32 142.9 91 79.1
CBR_g547 Chara braunii HOM05D005550 ORTHO05D006679 3.4e-31 139.8 319 32.9
Cpa.g.sc29.180 Carica papaya HOM05D005550 ORTHO05D006679 9.8e-31 138.3 92 73.9
Potri.003G078601 Populus trichocarpa HOM05D005550 ORTHO05D006679 1.1e-16 91.7 53 83.0
SEGI_25288 Sequoiadendron giganteum HOM05D005550 ORTHO05D006679 2.4e-16 90.5 74 62.2
MBI06_g10737_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D011024 1.5e-15 87.8 53 77.4
PRCOL_00003604 Prasinoderma coloniale HOM05D005550 ORTHO05D006679 3.8e-14 83.2 323 25.4
Nn1g05728 Nelumbo nucifera HOM05D005550 ORTHO05D006679 1.1e-13 81.6 57 73.7
Nn1g05737 Nelumbo nucifera HOM05D005550 ORTHO05D006679 1.1e-13 81.6 57 73.7
MBI15_g30439_MAGBIO Magnolia biondii HOM05D005550 ORTHO05D011024 1.1e-10 71.6 41 80.5
MBI06_g16692_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D008292 4.3e-10 69.7 39 82.1
Cfa026892 Carpinus fangiana HOM05D001061 ORTHO05D006679 1.7e-06 57.8 227 25.6


User provided reference genes

Program Settings