Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund07969 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.2e-213 745.3 368 100.0
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.4e-182 641.7 398 83.9
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.4e-182 641.7 398 83.9
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.9e-173 612.1 398 81.7
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.9e-173 612.1 398 81.7
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.9e-173 612.1 398 81.7
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.9e-173 612.1 398 81.7
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.9e-173 612.1 398 81.7
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.9e-173 612.1 398 81.7
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.9e-173 612.1 398 81.7
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-173 611.7 391 82.4
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.4e-167 593.2 398 79.9
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 9.9e-150 533.9 334 85.6
Hund31462 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-143 513.8 257 98.4
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 2.7e-131 472.6 415 65.3
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 3.1e-119 432.6 404 62.1
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 3.1e-119 432.6 404 62.1
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 5.1e-114 415.2 415 58.6
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 3.1e-111 406.0 426 58.2
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 7.7e-110 401.4 425 57.4
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 3.8e-109 399.1 425 57.2
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 3.8e-109 399.1 425 57.2
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 3.2e-108 396.0 425 56.0
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.8e-106 390.2 425 55.8
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.8e-106 390.2 425 55.8
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.8e-106 390.2 425 55.8
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.8e-106 390.2 425 55.8
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.8e-106 390.2 425 55.8
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 6.7e-106 388.3 425 56.0
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 1.5e-105 387.1 422 55.7
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 3.3e-105 386.0 429 55.5
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 7.4e-105 384.8 425 56.2
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 2.8e-104 382.9 422 55.0
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 2.0e-102 376.7 424 55.9
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 9.4e-100 367.9 299 69.9
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 3.1e-95 352.8 371 59.8
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 3.8e-93 345.9 431 51.0
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 1.5e-92 344.0 433 51.5
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.2e-92 342.8 235 78.7
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 2.1e-91 340.1 426 50.2
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 2.1e-91 340.1 426 50.2
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 2.1e-91 340.1 426 50.2
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 2.3e-90 336.7 425 49.9
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 1.5e-89 334.0 376 53.7
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 3.1e-87 326.2 392 52.8
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 3.2e-84 316.2 397 49.1
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 2.3e-82 310.1 423 46.3
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 1.1e-76 291.2 414 48.3
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 4.7e-67 259.2 379 47.2
Medtr3g450720 Medicago truncatula HOM05D000216 ORTHO05D000634 4.0e-66 256.1 357 45.7
Nitab4.5_0000172g0280 Nicotiana tabacum HOM05D000216 ORTHO05D000634 4.0e-66 256.1 336 51.8
Nitab4.5_0001761g0170 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.3e-64 251.1 345 49.3
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 4.6e-62 242.7 196 65.3
BraSC151t45695Z Brassica rapa HOM05D000216 ORTHO05D000634 1.9e-60 237.3 198 64.6
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 2.8e-59 233.4 197 66.5
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 6.2e-59 232.3 575 33.2
ClCG07G007330 Citrullus lanatus HOM05D000216 ORTHO05D000634 7.5e-57 225.3 300 49.3
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 9.8e-57 224.9 564 33.5
CARHR281920 Cardamine hirsuta HOM05D000216 ORTHO05D000634 1.7e-56 224.2 192 62.0
HanXRQChr00c0300g0573171 Helianthus annuus HOM05D000216 ORTHO05D000634 6.4e-56 222.2 200 60.5
Zm00001eb271610 Zea mays HOM05D000216 ORTHO05D000634 1.1e-55 221.5 574 31.7
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 2.3e-50 203.8 353 41.9
Nitab4.5_0005637g0010 Nicotiana tabacum HOM05D000216 ORTHO05D000634 7.5e-49 198.7 198 56.1
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 3.2e-47 193.4 376 37.8
Solyc01g017420.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 7.1e-47 192.2 197 54.3
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 2.7e-46 190.3 137 75.2
Hund04024 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.7e-46 190.3 242 53.3
HanXRQChr14g0436631 Helianthus annuus HOM05D000216 ORTHO05D000634 1.7e-45 187.6 173 60.1
MSTRG.17791 Avicennia marina HOM05D000216 ORTHO05D000634 1.9e-44 184.1 138 71.0
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 2.1e-43 180.6 137 72.3
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 1.1e-42 178.3 275 44.4
Thhalv10023328m.g Eutrema salsugineum HOM05D000216 ORTHO05D000634 1.8e-42 177.6 336 39.0
CAN.G939.14 Capsicum annuum HOM05D000216 ORTHO05D000634 6.4e-40 169.1 158 58.9
MELO3C000330.2 Cucumis melo HOM05D000216 ORTHO05D000634 1.1e-36 158.3 122 68.9
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 3.3e-36 156.8 128 66.4
SGA_v2.0_scaffold119G32687 Striga asiatica HOM05D000216 ORTHO05D000634 9.6e-36 155.2 153 57.5
BraSC143t45681Z Brassica rapa HOM05D000216 ORTHO05D000634 2.1e-35 154.1 109 76.1
BraSC143t45682Z Brassica rapa HOM05D000216 ORTHO05D000634 8.1e-35 152.1 140 62.1
BraSC58t46406Z Brassica rapa HOM05D000216 ORTHO05D000634 8.1e-35 152.1 140 62.1
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 2.0e-33 147.5 378 35.4
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 5.4e-31 139.4 334 36.8
Lalb_Chr06g0173011 Lupinus albus HOM05D000216 ORTHO05D000634 1.6e-30 137.9 105 63.8
Hund10655 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.7e-30 137.1 194 44.3
BraSC140t45608Z Brassica rapa HOM05D000216 ORTHO05D000634 7.3e-28 129.0 89 74.2
CAN.G386.8 Capsicum annuum HOM05D000216 ORTHO05D001131 2.1e-27 127.5 99 67.7
Hund12596 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.1e-27 127.5 81 77.8
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 2.8e-27 127.1 226 37.6
Gorai.008G142400 Gossypium raimondii HOM05D000216 ORTHO05D000634 4.8e-27 126.3 98 66.3
HanXRQChr00c0300g0573181 Helianthus annuus HOM05D000216 ORTHO05D000634 8.1e-27 125.6 106 64.2
Lsat_1_v5_gn_9_5941 Lactuca sativa HOM05D000216 ORTHO05D000634 8.1e-27 125.6 123 57.7
BraSC151t45703Z Brassica rapa HOM05D000216 ORTHO05D000634 2.4e-26 124.0 120 60.0
GSVIVG01034287001 Vitis vinifera HOM05D000216 ORTHO05D000634 9.0e-26 122.1 84 73.8
Lj2C1237G1 Lonicera japonica HOM05D000216 ORTHO05D000634 2.0e-25 120.9 203 42.4
Gohir.D12G131101 Gossypium hirsutum HOM05D000216 ORTHO05D000634 3.4e-25 120.2 98 65.3
Hma1.2p1_0094F.1_g047104 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 4.5e-25 119.8 91 69.2
Oeu012803.1 Olea europaea HOM05D000216 ORTHO05D000634 9.9e-25 118.6 111 56.8
HanXRQChr03g0073121 Helianthus annuus HOM05D000216 ORTHO05D000634 1.3e-24 118.2 97 61.9
Lalb_Chr04g0260931 Lupinus albus HOM05D000216 ORTHO05D002552 1.7e-24 117.9 132 53.8
Solyc08g028920.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.7e-24 117.9 229 38.0
HanXRQChr00c0313g0573471 Helianthus annuus HOM05D000216 ORTHO05D000634 2.2e-24 117.5 105 61.9
EL10Ac6g14564 Beta vulgaris HOM05D000216 ORTHO05D000634 2.9e-24 117.1 163 44.8
C02p44110 Brassica napus HOM05D000216 ORTHO05D000634 1.9e-23 114.4 121 56.2
Psat4g147920 Pisum sativum HOM05D000216 ORTHO05D000634 1.9e-23 114.4 130 53.8
Hund12594 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-23 113.2 110 57.3
Gohir.A09G101340 Gossypium hirsutum HOM05D000216 ORTHO05D000634 3.5e-22 110.2 81 67.9
Ah.10g028500 Amaranthus hybridus HOM05D000216 ORTHO05D000634 4.6e-22 109.8 63 85.7
Gohir.A13G086345 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.3e-21 108.2 87 65.5
HanXRQChr14g0436641 Helianthus annuus HOM05D000216 ORTHO05D000634 1.3e-21 108.2 144 48.6
Zm00001eb226410 Zea mays HOM05D000216 ORTHO05D000634 8.7e-21 105.5 92 58.7
Zm00001eb314280 Zea mays HOM05D000216 ORTHO05D000634 8.7e-21 105.5 92 58.7
Gohir.A13G053484 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.9e-20 104.4 87 62.1
Zm00001eb434960 Zea mays HOM05D000216 ORTHO05D000634 1.9e-20 104.4 92 57.6
Zm00001eb435270 Zea mays HOM05D000216 ORTHO05D000634 1.9e-20 104.4 92 57.6
Zm00001eb435480 Zea mays HOM05D000216 ORTHO05D000634 1.9e-20 104.4 92 57.6
Zm00001eb437260 Zea mays HOM05D000216 ORTHO05D000634 1.9e-20 104.4 92 57.6
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 3.3e-20 103.6 94 58.5
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 3.3e-20 103.6 94 58.5
Potri.003G067332 Populus trichocarpa HOM05D000216 ORTHO05D000634 9.6e-20 102.1 60 80.0
Gohir.D13G070450 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.1e-19 100.9 86 60.5
PGSC0003DMG400020296 Solanum tuberosum HOM05D000216 ORTHO05D000634 2.8e-19 100.5 65 72.3
SGA_v2.0_scaffold132G34498 Striga asiatica HOM05D000216 ORTHO05D000634 6.2e-19 99.4 69 69.6
Nitab4.5_0011099g0070 Nicotiana tabacum HOM05D000216 ORTHO05D000634 8.1e-19 99.0 125 48.0
arahy.Tifrunner.gnm1.ann1.F2PHFK Arachis hypogaea HOM05D000890 ORTHO05D000697 1.8e-18 97.8 80 61.2
Lalb_Chr22g0361661 Lupinus albus HOM05D000216 ORTHO05D000634 1.8e-18 97.8 92 58.7
arahy.Tifrunner.gnm1.ann1.ZI741N Arachis hypogaea HOM05D000216 ORTHO05D000634 9.0e-18 95.5 208 36.1
Gohir.D13G143950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 9.0e-18 95.5 57 75.4
Oeu062867.1 Olea europaea HOM05D000216 ORTHO05D000634 9.0e-18 95.5 57 75.4
HanXRQChr14g0455011 Helianthus annuus HOM05D000216 ORTHO05D000634 2.6e-17 94.0 96 54.2
Nitab4.5_0003361g0070 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.6e-17 94.0 140 44.3
Oeu012826.1 Olea europaea HOM05D000216 ORTHO05D000634 2.6e-17 94.0 88 60.2
arahy.Tifrunner.gnm1.ann1.8W122S Arachis hypogaea HOM05D000216 ORTHO05D000634 5.8e-17 92.8 70 60.0
CAN.G844.3 Capsicum annuum HOM05D000216 ORTHO05D000634 6.4e-16 89.4 57 71.9
Medtr5g071320 Medicago truncatula HOM05D000216 ORTHO05D000634 1.1e-15 88.6 66 65.2
Migut.M00502 Erythranthe guttata HOM05D000216 ORTHO05D000634 5.5e-15 86.3 154 40.9
Solyc03g095380.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 7.9e-14 82.4 136 41.2
Zm00001eb435750 Zea mays HOM05D000216 ORTHO05D000634 1.0e-13 82.0 73 57.5
Zm00001eb437130 Zea mays HOM05D000216 ORTHO05D000634 1.0e-13 82.0 73 57.5
Zm00001eb437780 Zea mays HOM05D000216 ORTHO05D000634 1.0e-13 82.0 73 57.5
Zm00001eb438310 Zea mays HOM05D000216 ORTHO05D000634 1.0e-13 82.0 73 57.5
TPR.G1481 Trifolium pratense HOM05D000216 ORTHO05D000634 5.1e-13 79.7 60 66.7
Potri.019G027580 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.5e-12 78.2 56 71.4
EL10Ac5g11996 Beta vulgaris HOM05D000216 ORTHO05D000634 2.5e-12 77.4 39 84.6
Oeu045561.1 Olea europaea HOM05D000216 ORTHO05D000634 2.5e-12 77.4 91 49.5
Nitab4.5_0000502g0030 Nicotiana tabacum HOM05D000216 ORTHO05D000634 5.6e-12 76.3 66 60.6
Phvul.003G256666 Phaseolus vulgaris HOM05D000216 ORTHO05D000634 1.6e-11 74.7 55 65.5
Lalb_Chr13g0292891 Lupinus albus HOM05D000216 ORTHO05D000634 4.8e-11 73.2 61 55.7
Gorai.004G210400 Gossypium raimondii HOM05D000216 ORTHO05D000634 6.2e-11 72.8 56 64.3
Solyc01g017510.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.4e-10 71.6 192 30.7
Gohir.D08G199601 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.4e-10 70.9 56 62.5
Medtr7g116700 Medicago truncatula HOM05D000216 ORTHO05D000634 5.3e-10 69.7 55 61.8
BolSC44t60847H Brassica oleracea HOM05D000216 ORTHO05D000634 3.4e-09 67.0 33 87.9
CsaV3_5G013200 Cucumis sativus L. HOM05D000580 ORTHO05D001488 7.6e-09 65.9 90 50.0
Solyc10g047410.1 Solanum lycopersicum HOM05D000890 ORTHO05D000697 2.2e-08 64.3 56 55.4
Nitab4.5_0000502g0040 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.9e-08 63.9 154 32.5
Solyc08g028940.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.9e-08 63.2 30 86.7
Lalb_Chr09g0335371 Lupinus albus HOM05D000216 ORTHO05D000634 1.9e-07 61.2 33 78.8
Migut.D01415 Erythranthe guttata HOM05D000216 ORTHO05D000634 9.3e-07 58.9 128 39.1
arahy.Tifrunner.gnm1.ann1.ZJYB0J Arachis hypogaea HOM05D000216 ORTHO05D000473 2.1e-06 57.8 33 69.7
Hund01151 Selenicereus undatus HOM05D000216 ORTHO05D379740 2.1e-06 57.8 36 77.8
Nitab4.5_0004184g0050 Nicotiana tabacum HOM05D000216 ORTHO05D014572 3.5e-06 57.0 89 43.8
Aa31csc39G130 Aethionema arabicum HOM05D000216 ORTHO05D000634 6.1e-06 56.2 79 43.0


User provided reference genes

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