Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03955 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-101 373.2 180 100.0
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.2e-41 171.0 104 82.7
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.2e-41 171.0 104 82.7
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.2e-41 171.0 104 82.7
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.2e-41 171.0 104 82.7
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.2e-41 171.0 104 82.7
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.2e-41 171.0 104 82.7
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.2e-41 171.0 104 82.7
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.2e-41 171.0 104 82.7
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.2e-41 171.0 104 82.7
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.2e-41 171.0 104 82.7
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.2e-41 171.0 104 82.7
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 2.3e-35 152.9 104 75.0
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 5.2e-35 151.8 104 73.1
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 8.8e-35 151.0 104 73.1
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 8.8e-35 151.0 104 73.1
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 2.0e-34 149.8 104 73.1
CAN.G386.8 Capsicum annuum HOM05D000216 ORTHO05D001131 2.0e-34 149.8 104 73.1
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.0e-34 149.8 104 73.1
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.0e-34 149.8 104 73.1
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.0e-34 149.8 104 73.1
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.0e-34 149.8 104 73.1
PGSC0003DMG400020296 Solanum tuberosum HOM05D000216 ORTHO05D000634 2.0e-34 149.8 104 73.1
Hund10654 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-34 149.4 109 73.4
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.6e-34 149.4 99 76.8
Solyc03g095380.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.6e-34 149.4 111 69.4
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 3.4e-34 149.1 104 72.1
Nitab4.5_0005637g0010 Nicotiana tabacum HOM05D000216 ORTHO05D000634 3.4e-34 149.1 104 71.2
AUR62030122 Chenopodium quinoa HOM05D000216 ORTHO05D000634 4.4e-34 148.7 104 72.1
AUR62024082 Chenopodium quinoa HOM05D000216 ORTHO05D000634 5.7e-34 148.3 104 72.1
Hma1.2p1_0094F.1_g047104 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 5.7e-34 148.3 104 72.1
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 1.3e-33 147.1 104 70.2
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 1.3e-33 147.1 104 72.1
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 1.3e-33 147.1 104 72.1
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 1.3e-33 147.1 104 72.1
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 2.2e-33 146.4 104 69.2
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 3.7e-33 145.6 104 72.1
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 3.7e-33 145.6 104 72.1
Lsat_1_v5_gn_9_5941 Lactuca sativa HOM05D000216 ORTHO05D000634 3.7e-33 145.6 104 72.1
Lj2A1237T129 Lonicera japonica HOM05D000216 ORTHO05D000634 1.4e-32 143.7 122 63.9
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.8e-32 143.3 104 71.2
HanXRQChr14g0436631 Helianthus annuus HOM05D000216 ORTHO05D000634 1.8e-32 143.3 104 71.2
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 1.8e-32 143.3 104 71.2
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 3.1e-32 142.5 104 70.2
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 4.1e-32 142.1 104 68.3
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 4.1e-32 142.1 104 69.2
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 4.1e-32 142.1 104 69.2
CAN.G939.14 Capsicum annuum HOM05D000216 ORTHO05D000634 5.4e-32 141.7 104 69.2
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 7.0e-32 141.4 103 72.8
arahy.Tifrunner.gnm1.ann1.ZJYB0J Arachis hypogaea HOM05D000216 ORTHO05D000473 1.2e-31 140.6 104 67.3
Gohir.D13G143950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.6e-31 140.2 104 66.3
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 1.6e-31 140.2 104 68.3
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 3.5e-31 139.0 104 69.2
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 5.9e-31 138.3 104 67.3
Nitab4.5_0000172g0280 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.0e-30 137.5 126 58.7
Solyc10g011720.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.0e-30 137.5 99 70.7
HanXRQChr03g0073121 Helianthus annuus HOM05D000216 ORTHO05D000634 2.3e-30 136.3 104 68.3
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 3.8e-30 135.6 104 65.4
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 3.8e-30 135.6 104 65.4
Lalb_Chr09g0335371 Lupinus albus HOM05D000216 ORTHO05D000634 5.0e-30 135.2 105 66.7
Lalb_Chr22g0361661 Lupinus albus HOM05D000216 ORTHO05D000634 5.0e-30 135.2 105 66.7
Psat4g147920 Pisum sativum HOM05D000216 ORTHO05D000634 8.6e-30 134.4 104 66.3
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 1.1e-29 134.0 104 64.4
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 1.5e-29 133.7 104 65.4
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 1.5e-29 133.7 104 65.4
BolSC44t60847H Brassica oleracea HOM05D000216 ORTHO05D000634 1.5e-29 133.7 104 65.4
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 1.5e-29 133.7 104 65.4
BraSC151t45695Z Brassica rapa HOM05D000216 ORTHO05D000634 1.5e-29 133.7 104 65.4
Solyc12g096910.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.5e-29 133.7 94 71.3
Solyc01g017510.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.9e-29 133.3 104 67.3
Eucgr.J01352 Eucalyptus grandis HOM05D000216 ORTHO05D000634 2.5e-29 132.9 98 69.4
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 7.2e-29 131.3 104 64.4
SGA_v2.0_scaffold119G32687 Striga asiatica HOM05D000216 ORTHO05D000634 2.1e-28 129.8 106 65.1
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 2.1e-28 129.8 104 64.4
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 3.6e-28 129.0 104 61.5
CARHR281920 Cardamine hirsuta HOM05D000216 ORTHO05D000634 4.7e-28 128.6 104 62.5
Oeu062867.1 Olea europaea HOM05D000216 ORTHO05D000634 4.7e-28 128.6 100 67.0
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 1.0e-27 127.5 104 61.5
CAN.G844.3 Capsicum annuum HOM05D000216 ORTHO05D000634 2.3e-27 126.3 98 65.3
Lalb_Chr04g0260931 Lupinus albus HOM05D000216 ORTHO05D002552 6.8e-27 124.8 98 67.3
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 2.6e-26 122.9 104 58.7
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 3.7e-25 119.0 104 59.6
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 1.2e-23 114.0 83 71.1
Solyc01g017420.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.0e-23 113.2 104 59.6
Hund28153 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.6e-22 108.2 63 79.4
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 8.6e-22 107.8 113 56.6
Nitab4.5_0002868g0030 Nicotiana tabacum HOM05D000216 ORTHO05D000634 9.5e-21 104.4 86 62.8
Hund28617 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.7e-20 102.1 60 80.0
Hund25861 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-19 100.9 93 60.2
Nitab4.5_0001761g0170 Nicotiana tabacum HOM05D000216 ORTHO05D000634 8.9e-19 97.8 70 72.9
Migut.D01415 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.2e-18 97.4 152 39.5
Thhalv10023328m.g Eutrema salsugineum HOM05D000216 ORTHO05D000634 1.2e-18 97.4 80 60.0
HanXRQChr00c0300g0573171 Helianthus annuus HOM05D000216 ORTHO05D000634 1.5e-18 97.1 65 78.5
Oeu012803.1 Olea europaea HOM05D000216 ORTHO05D000634 2.0e-18 96.7 104 51.0
BraSC140t45588Z Brassica rapa HOM05D000216 ORTHO05D000634 7.8e-15 84.7 63 63.5
Gorai.004G245000 Gossypium raimondii HOM05D000216 ORTHO05D000634 5.0e-14 82.0 58 65.5
Nitab4.5_0000502g0030 Nicotiana tabacum HOM05D000216 ORTHO05D000634 8.6e-14 81.3 121 43.0
EL10Ac5g12008 Beta vulgaris HOM05D000216 ORTHO05D000634 9.5e-13 77.8 98 45.9
SMO086G0013 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 1.6e-12 77.0 121 39.7
Migut.M00502 Erythranthe guttata HOM05D000216 ORTHO05D000634 2.1e-12 76.6 76 57.9
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 1.1e-11 74.3 46 73.9
arahy.Tifrunner.gnm1.ann1.09TZAG Arachis hypogaea HOM05D000216 ORTHO05D000634 2.0e-10 70.1 54 59.3
arahy.Tifrunner.gnm1.ann1.KRC0HM Arachis hypogaea HOM05D000216 ORTHO05D000634 2.6e-10 69.7 49 61.2
HanXRQChr10g0282541 Helianthus annuus HOM05D000216 ORTHO05D000634 7.5e-10 68.2 49 69.4
EL10Ac5g11996 Beta vulgaris HOM05D000216 ORTHO05D000634 1.3e-09 67.4 82 47.6
Nitab4.5_0001783g0070 Nicotiana tabacum HOM05D000216 ORTHO05D002807 7.0e-08 61.6 49 59.2
Hund12597 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.5e-07 59.3 32 81.2
ClCG01G011260 Citrullus lanatus HOM05D000216 ORTHO05D000634 1.3e-06 57.4 34 70.6
Ah.02g118920 Amaranthus hybridus HOM05D005794 ORTHO05D006814 5.0e-06 55.5 35 65.7


User provided reference genes

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