Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0014F.1_g009640 Hydrangea macrophylla HOM05D001045 ORTHO05D004836 1.8e-30 135.2 64 100.0
Dinv11158 Davidia involucrata HOM05D001045 ORTHO05D004836 1.2e-29 132.5 63 96.8
TAR629G1776 Trochodendron aralioides HOM05D001045 ORTHO05D004836 1.2e-29 132.5 63 96.8
CSS0020803 Camellia sinensis var. sinensis HOM05D001045 ORTHO05D004836 3.4e-29 131.0 63 93.7
Thhalv10003624m.g Eutrema salsugineum HOM05D001045 ORTHO05D004836 9.8e-29 129.4 63 93.7
MBI16_g26173_MAGBIO Magnolia biondii HOM05D001045 ORTHO05D004836 9.8e-29 129.4 62 95.2
Rhsim08G0188700 Rhododendron simsii HOM05D001045 ORTHO05D004836 9.8e-29 129.4 63 92.1
Actinidia15837 Actinidia chinensis HOM05D001045 ORTHO05D004836 1.3e-28 129.0 63 92.1
Actinidia25588 Actinidia chinensis HOM05D001045 ORTHO05D004836 1.3e-28 129.0 63 92.1
BcaC01g02587 Brassica carinata HOM05D001045 ORTHO05D004836 1.3e-28 129.0 63 92.1
A06p30050 Brassica napus HOM05D001045 ORTHO05D004836 1.3e-28 129.0 63 92.1
C03p63160 Brassica napus HOM05D001045 ORTHO05D004836 1.3e-28 129.0 63 92.1
BolC3t18571H Brassica oleracea HOM05D001045 ORTHO05D004836 1.3e-28 129.0 63 92.1
BraA06t25957Z Brassica rapa HOM05D001045 ORTHO05D004836 1.3e-28 129.0 63 92.1
ECA240G2390 Erigeron canadensis HOM05D001045 ORTHO05D004836 1.3e-28 129.0 63 92.1
Sp2g26510 Schrenkiella parvula HOM05D001045 ORTHO05D004836 1.3e-28 129.0 63 92.1
Aqoxy3G01499 Aquilegia oxysepala HOM05D001045 ORTHO05D004836 1.7e-28 128.6 62 95.2
vmacro16670 Vaccinium macrocarpon HOM05D001045 ORTHO05D004836 1.7e-28 128.6 62 93.5
Aa31LG1G18610 Aethionema arabicum HOM05D001045 ORTHO05D004836 2.2e-28 128.3 63 92.1
MELO3C026230.2 Cucumis melo HOM05D001045 ORTHO05D004836 2.2e-28 128.3 63 93.7
Sabra12G0070200 Salix brachista HOM05D001045 ORTHO05D004836 2.2e-28 128.3 63 90.5
MBI11_g06773_MAGBIO Magnolia biondii HOM05D001045 ORTHO05D004836 2.8e-28 127.9 63 92.1
Potri.015G093600 Populus trichocarpa HOM05D001045 ORTHO05D004836 2.8e-28 127.9 63 90.5
Sabra15G0115200 Salix brachista HOM05D001045 ORTHO05D004836 2.8e-28 127.9 63 90.5
Sed0018235 Sechium edule HOM05D001045 ORTHO05D004836 2.8e-28 127.9 63 92.1
SGA_v2.0_scaffold215G42334 Striga asiatica HOM05D001045 ORTHO05D004836 2.8e-28 127.9 62 93.5
THA.LOC104798948 Tarenaya hassleriana HOM05D001045 ORTHO05D004836 2.8e-28 127.9 63 92.1
unitig_27.g25101 Utricularia gibba HOM05D001045 ORTHO05D004836 2.8e-28 127.9 63 92.1
Eucgr.B00129 Eucalyptus grandis HOM05D001045 ORTHO05D004836 3.7e-28 127.5 63 92.1
AT5G63420 Arabidopsis thaliana HOM05D001045 ORTHO05D004836 4.9e-28 127.1 63 88.9
CARHR277280 Cardamine hirsuta HOM05D001045 ORTHO05D004836 4.9e-28 127.1 62 93.5
ClCG06G017790 Citrullus lanatus HOM05D001045 ORTHO05D004836 4.9e-28 127.1 63 92.1
CsaV3_1G000660 Cucumis sativus L. HOM05D001045 ORTHO05D004836 4.9e-28 127.1 63 92.1
DCAR_016404 Daucus carota HOM05D001045 ORTHO05D004836 4.9e-28 127.1 62 91.9
AL8G40490 Arabidopsis lyrata HOM05D001045 ORTHO05D004836 6.3e-28 126.7 62 91.9
Carub.0008s2413 Capsella rubella HOM05D001045 ORTHO05D004836 6.3e-28 126.7 62 91.9
Nn3g16511 Nelumbo nucifera HOM05D001045 ORTHO05D004836 6.3e-28 126.7 63 92.1
Migut.I00512 Erythranthe guttata HOM05D001045 ORTHO05D004836 8.3e-28 126.3 62 90.3
QL10p004119 Quercus lobata HOM05D001045 ORTHO05D004836 8.3e-28 126.3 63 92.1
QL10p004182 Quercus lobata HOM05D001045 ORTHO05D004836 8.3e-28 126.3 63 92.1
GSVIVG01008515001 Vitis vinifera HOM05D001045 ORTHO05D004836 8.3e-28 126.3 63 92.1
HanXRQChr03g0064991 Helianthus annuus HOM05D001045 ORTHO05D004836 1.1e-27 125.9 63 90.5
Zm00001eb234620 Zea mays HOM05D001045 ORTHO05D004836 1.1e-27 125.9 62 93.5
MSTRG.22907 Avicennia marina HOM05D001045 ORTHO05D004836 1.4e-27 125.6 61 91.8
CAN.G352.26 Capsicum annuum HOM05D001045 ORTHO05D004836 1.8e-27 125.2 62 90.3
COL.COLO4_28086 Corchorus olitorius HOM05D001045 ORTHO05D004836 1.8e-27 125.2 63 92.1
DCAR_026220 Daucus carota HOM05D001045 ORTHO05D004836 1.8e-27 125.2 63 87.3
Lj1g0009758 Lotus japonicus HOM05D001045 ORTHO05D004836 1.8e-27 125.2 63 92.1
Potri.012G095800 Populus trichocarpa HOM05D001045 ORTHO05D004836 1.8e-27 125.2 62 90.3
arahy.Tifrunner.gnm1.ann1.3BP915 Arachis hypogaea HOM05D001045 ORTHO05D004836 2.4e-27 124.8 63 92.1
arahy.Tifrunner.gnm1.ann1.3PZ9PI Arachis hypogaea HOM05D001045 ORTHO05D004836 2.4e-27 124.8 63 92.1
FvH4_5g07980 Fragaria vesca HOM05D001045 ORTHO05D004836 2.4e-27 124.8 63 90.5
FAN04G1508 Fragaria x ananassa HOM05D001045 ORTHO05D004836 2.4e-27 124.8 63 90.5
FAN08G1251 Fragaria x ananassa HOM05D001045 ORTHO05D004836 2.4e-27 124.8 63 90.5
FAN18G4157 Fragaria x ananassa HOM05D001045 ORTHO05D004836 2.4e-27 124.8 63 90.5
Psat4g062560 Pisum sativum HOM05D001045 ORTHO05D004836 2.4e-27 124.8 63 90.5
PGR083G0639 Punica granatum HOM05D001045 ORTHO05D004836 2.4e-27 124.8 63 87.3
RcHm_v2.0_Chr7g0190431 Rosa chinensis HOM05D001045 ORTHO05D004836 2.4e-27 124.8 63 90.5
Solyc03g111260.3 Solanum lycopersicum HOM05D001045 ORTHO05D004836 2.4e-27 124.8 62 88.7
Sopen03g030390 Solanum pennellii HOM05D001045 ORTHO05D004836 2.4e-27 124.8 62 88.7
PGSC0003DMG402015244 Solanum tuberosum HOM05D001045 ORTHO05D004836 2.4e-27 124.8 62 88.7
Atru.chr9.1079 Acer truncatum HOM05D001045 ORTHO05D004836 3.1e-27 124.4 63 92.1
Ah.11g045420 Amaranthus hybridus HOM05D001045 ORTHO05D004836 3.1e-27 124.4 63 88.9
EL10As4g23417 Beta vulgaris HOM05D001045 ORTHO05D004836 3.1e-27 124.4 63 88.9
Cfa018840 Carpinus fangiana HOM05D001045 ORTHO05D004836 3.1e-27 124.4 62 91.9
CDE04G0888 Ceratophyllum demersum HOM05D001045 ORTHO05D004836 3.1e-27 124.4 62 91.9
Haze_07234 Corylus avellana HOM05D001045 ORTHO05D004836 3.1e-27 124.4 62 91.9
MD14G1158900 Malus domestica HOM05D001045 ORTHO05D004836 3.1e-27 124.4 63 90.5
Prupe.5G152800 Prunus persica HOM05D001045 ORTHO05D004836 3.1e-27 124.4 63 90.5
HPP92_008938 Vanilla planifolia HOM05D001045 ORTHO05D004836 3.1e-27 124.4 62 88.7
CiPaw.12G041700 Carya illinoinensis HOM05D001045 ORTHO05D004836 4.1e-27 124.0 62 91.9
Glyma.04G194600 Glycine max HOM05D001045 ORTHO05D004836 4.1e-27 124.0 63 90.5
Lalb_Chr23g0273561 Lupinus albus HOM05D001045 ORTHO05D004836 4.1e-27 124.0 63 90.5
Oeu006361.1 Olea europaea HOM05D001045 ORTHO05D004836 4.1e-27 124.0 62 90.3
Os02g0539600 Oryza sativa ssp. japonica HOM05D001045 ORTHO05D004836 4.1e-27 124.0 62 91.9
Peaxi162Scf00089g00522 Petunia axillaris HOM05D001045 ORTHO05D004836 4.1e-27 124.0 61 91.8
VMungo1215G2889 Vigna mungo HOM05D001045 ORTHO05D004836 4.1e-27 124.0 63 90.5
arahy.Tifrunner.gnm1.ann1.B3AG7P Arachis hypogaea HOM05D001045 ORTHO05D004836 5.4e-27 123.6 63 88.9
arahy.Tifrunner.gnm1.ann1.XN7UED Arachis hypogaea HOM05D001045 ORTHO05D004836 5.4e-27 123.6 63 88.9
Ca_00917_v3 Cicer arietinum L. HOM05D001045 ORTHO05D004836 5.4e-27 123.6 62 91.9
Ciclev10018763m.g Citrus clementina HOM05D001045 ORTHO05D004836 5.4e-27 123.6 62 91.9
Gohir.A07G051700 Gossypium hirsutum HOM05D001045 ORTHO05D004836 5.4e-27 123.6 63 90.5
Gorai.001G059600 Gossypium raimondii HOM05D001045 ORTHO05D004836 5.4e-27 123.6 63 90.5
Lalb_Chr11g0069641 Lupinus albus HOM05D001045 ORTHO05D004836 5.4e-27 123.6 63 88.9
Phvul.003G209600 Phaseolus vulgaris HOM05D001045 ORTHO05D004836 5.4e-27 123.6 63 88.9
Psat5g139840 Pisum sativum HOM05D001045 ORTHO05D004836 5.4e-27 123.6 63 88.9
Thecc.03G126800 Theobroma cacao HOM05D001045 ORTHO05D004836 5.4e-27 123.6 63 90.5
vmacro19213 Vaccinium macrocarpon HOM05D001045 ORTHO05D004836 5.4e-27 123.6 63 90.5
VMungo1309G1120 Vigna mungo HOM05D001045 ORTHO05D004836 5.4e-27 123.6 62 91.9
Ca_24509_v3 Cicer arietinum L. HOM05D001045 ORTHO05D004836 7.0e-27 123.2 63 88.9
Lsat_1_v5_gn_1_81241 Lactuca sativa HOM05D001045 ORTHO05D004836 7.0e-27 123.2 62 90.3
Nitab4.5_0003005g0050 Nicotiana tabacum HOM05D001045 ORTHO05D004836 7.0e-27 123.2 61 90.2
Peaxi162Scf00536g00312 Petunia axillaris HOM05D001045 ORTHO05D004836 7.0e-27 123.2 61 90.2
TWI14G1089 Tripterygium wilfordii HOM05D001045 ORTHO05D004836 7.0e-27 123.2 63 88.9
Cc03_g13140 Coffea canephora HOM05D001045 ORTHO05D004836 9.2e-27 122.9 61 93.4
Duzib205G1644 Durio zibethinus HOM05D001045 ORTHO05D004836 9.2e-27 122.9 63 90.5
MD06G1143600 Malus domestica HOM05D001045 ORTHO05D004836 9.2e-27 122.9 63 88.9
Manes.14G052700 Manihot esculenta HOM05D001045 ORTHO05D004836 9.2e-27 122.9 63 84.1
Nitab4.5_0003680g0020 Nicotiana tabacum HOM05D001045 ORTHO05D004836 9.2e-27 122.9 61 88.5
CANSAT80G0692 Cannabis sativa HOM05D001045 ORTHO05D004836 1.2e-26 122.5 62 90.3
Medtr4g103770 Medicago truncatula HOM05D001045 ORTHO05D004836 1.2e-26 122.5 62 90.3
TPR.G27530 Trifolium pratense HOM05D001045 ORTHO05D004836 1.2e-26 122.5 63 88.9
Glyma.06G171400 Glycine max HOM05D001045 ORTHO05D004836 1.6e-26 122.1 63 88.9
Gohir.A03G053500 Gossypium hirsutum HOM05D001045 ORTHO05D004836 2.0e-26 121.7 63 88.9
Gorai.003G119600 Gossypium raimondii HOM05D001045 ORTHO05D004836 2.0e-26 121.7 63 88.9
Hund02428 Selenicereus undatus HOM05D001045 ORTHO05D004836 2.0e-26 121.7 63 87.3
ATR0680G066 Amborella trichopoda HOM05D001045 ORTHO05D004836 2.7e-26 121.3 63 85.7
AUR62025919 Chenopodium quinoa HOM05D001045 ORTHO05D004836 2.7e-26 121.3 63 87.3
AUR62029637 Chenopodium quinoa HOM05D001045 ORTHO05D004836 2.7e-26 121.3 63 87.3
Medtr3g089020 Medicago truncatula HOM05D001045 ORTHO05D004836 2.7e-26 121.3 63 87.3
Sc04g0000750 Simmondsia chinensis HOM05D001045 ORTHO05D004836 2.7e-26 121.3 63 85.7
arahy.Tifrunner.gnm1.ann1.VYC4MA Arachis hypogaea HOM05D001045 ORTHO05D004836 4.5e-26 120.6 63 88.9
Glyma.17G128500 Glycine max HOM05D001045 ORTHO05D004836 4.5e-26 120.6 63 87.3
PSO017G5689 Papaver somniferum HOM05D001045 ORTHO05D004836 4.5e-26 120.6 62 88.7
PSO478G0896 Papaver somniferum HOM05D001045 ORTHO05D004836 4.5e-26 120.6 62 88.7
Lj9C477G11 Lonicera japonica HOM05D001045 ORTHO05D004836 5.0e-25 117.1 56 91.1
Gohir.D07G056200 Gossypium hirsutum HOM05D001045 ORTHO05D004836 8.6e-25 116.3 56 94.6
Cpa.g.sc13.140 Carica papaya HOM05D001045 ORTHO05D004836 2.5e-24 114.8 56 91.1
Mapoly0037s0113 Marchantia polymorpha HOM05D001045 ORTHO05D004836 3.3e-24 114.4 62 80.6
CDE07G0382 Ceratophyllum demersum HOM05D001045 ORTHO05D004836 9.5e-24 112.8 58 87.9
SEGI_07350 Sequoiadendron giganteum HOM05D001045 ORTHO05D004836 1.2e-23 112.5 63 73.0
AagrBONN_evm.TU.Sc2ySwM_369.157 Anthoceros agrestis HOM05D001045 ORTHO05D004836 1.6e-23 112.1 62 74.2
SMO141G0105 Selaginella moellendorffii HOM05D001045 ORTHO05D004836 2.1e-23 111.7 63 76.2
Pp3c20_9790 Physcomitrium patens HOM05D001045 ORTHO05D004836 6.1e-23 110.2 62 77.4
CBR_g16830 Chara braunii HOM05D001045 ORTHO05D004836 1.2e-21 105.9 62 69.4
Actinidia36799 Actinidia chinensis HOM05D001045 ORTHO05D004836 4.9e-20 100.5 46 93.5
Dinv04872 Davidia involucrata HOM05D001045 ORTHO05D004836 4.4e-13 77.4 37 97.3
PRCOL_00002539 Prasinoderma coloniale HOM05D001045 ORTHO05D004836 5.8e-13 77.0 37 83.8
Cre16.g683050 Chlamydomonas reinhardtii HOM05D001045 ORTHO05D004836 2.2e-12 75.1 39 79.5
MCO10G193 Micromonas commoda HOM05D001045 ORTHO05D004836 7.8e-10 66.6 40 65.0


User provided reference genes

Program Settings