Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26996 Corylus avellana HOM05D003934 ORTHO05D005108 1.7e-302 1042.0 545 100.0
CDE10G0188 Ceratophyllum demersum HOM05D003934 ORTHO05D005108 7.4e-101 372.1 549 40.6
CSS0014973 Camellia sinensis var. sinensis HOM05D003934 ORTHO05D005108 1.8e-99 367.5 549 39.9
HPP92_021551 Vanilla planifolia HOM05D003934 ORTHO05D005108 2.4e-99 367.1 548 40.1
Nitab4.5_0000714g0110 Nicotiana tabacum HOM05D003934 ORTHO05D005108 4.0e-99 366.3 549 38.3
PGSC0003DMG400009079 Solanum tuberosum HOM05D003934 ORTHO05D005108 5.3e-99 365.9 548 40.0
Sopen03g023200 Solanum pennellii HOM05D003934 ORTHO05D005108 6.9e-99 365.5 550 40.4
HPP92_021541 Vanilla planifolia HOM05D003934 ORTHO05D005108 6.9e-99 365.5 548 40.1
Hund11672 Selenicereus undatus HOM05D003934 ORTHO05D005108 1.2e-98 364.8 549 38.4
MSTRG.8665 Avicennia marina HOM05D003934 ORTHO05D005108 2.6e-98 363.6 550 37.6
Ciclev10004777m.g Citrus clementina HOM05D003934 ORTHO05D005108 4.5e-98 362.8 552 40.8
Solyc03g083430.3 Solanum lycopersicum HOM05D003934 ORTHO05D005108 5.8e-98 362.5 550 40.2
Manes.06G159600 Manihot esculenta HOM05D003934 ORTHO05D005108 7.6e-98 362.1 551 39.6
CAN.G108.66 Capsicum annuum HOM05D003934 ORTHO05D005108 1.3e-97 361.3 548 37.4
Hma1.2p1_1188F.1_g265250 Hydrangea macrophylla HOM05D003934 ORTHO05D005108 1.3e-97 361.3 549 37.3
arahy.Tifrunner.gnm1.ann1.W6P66N Arachis hypogaea HOM05D003934 ORTHO05D005108 1.7e-97 360.9 550 40.0
Eucgr.A01467 Eucalyptus grandis HOM05D003934 ORTHO05D005108 3.8e-97 359.8 548 40.0
Lj1C1015T5 Lonicera japonica HOM05D003934 ORTHO05D005108 3.8e-97 359.8 549 39.7
Lj1g0022752 Lotus japonicus HOM05D003934 ORTHO05D005108 8.4e-97 358.6 549 39.7
arahy.Tifrunner.gnm1.ann1.WX46MS Arachis hypogaea HOM05D003934 ORTHO05D005108 1.1e-96 358.2 550 39.6
EL10Ac3g05301 Beta vulgaris HOM05D003934 ORTHO05D005108 1.1e-96 358.2 550 38.0
CANSAT11G0158 Cannabis sativa HOM05D003934 ORTHO05D005108 1.1e-96 358.2 548 39.6
Duzib068G1159 Durio zibethinus HOM05D003934 ORTHO05D005108 1.1e-96 358.2 549 39.7
Medtr3g091250 Medicago truncatula HOM05D003934 ORTHO05D005108 1.4e-96 357.8 548 38.9
Duzib205G1942 Durio zibethinus HOM05D003934 ORTHO05D005108 1.9e-96 357.5 549 39.2
MD07G1290300 Malus domestica HOM05D003934 ORTHO05D005108 1.9e-96 357.5 549 39.3
Sabra15G0013200 Salix brachista HOM05D003934 ORTHO05D005108 1.9e-96 357.5 551 40.1
Sp6g36730 Schrenkiella parvula HOM05D003934 ORTHO05D005108 1.9e-96 357.5 550 39.6
Aa31LG11G7140 Aethionema arabicum HOM05D003934 ORTHO05D005108 2.5e-96 357.1 551 41.4
Psat5g078160 Pisum sativum HOM05D003934 ORTHO05D005108 2.5e-96 357.1 553 39.6
MD01G1219700 Malus domestica HOM05D003934 ORTHO05D005108 4.2e-96 356.3 549 39.3
Carub.0006s0504 Capsella rubella HOM05D003934 ORTHO05D005108 5.5e-96 355.9 550 37.5
Potri.015G017200 Populus trichocarpa HOM05D003934 ORTHO05D005108 7.1e-96 355.5 556 39.0
SGA_v2.0_scaffold44G16789 Striga asiatica HOM05D003934 ORTHO05D005108 7.1e-96 355.5 552 36.2
THA.LOC104820263 Tarenaya hassleriana HOM05D003934 ORTHO05D005108 7.1e-96 355.5 550 40.4
Glyma.04G236800 Glycine max HOM05D003934 ORTHO05D005108 9.3e-96 355.1 549 39.5
BraA02t04872Z Brassica rapa HOM05D003934 ORTHO05D005108 1.2e-95 354.8 548 39.1
AUR62006111 Chenopodium quinoa HOM05D003934 ORTHO05D005108 1.2e-95 354.8 550 37.6
Nn3g19008 Nelumbo nucifera HOM05D003934 ORTHO05D005108 1.2e-95 354.8 555 39.1
PGR042G0302 Punica granatum HOM05D003934 ORTHO05D005108 1.2e-95 354.8 549 39.5
GSVIVG01038711001 Vitis vinifera HOM05D003934 ORTHO05D005108 1.2e-95 354.8 549 36.6
Cc02_g01680 Coffea canephora HOM05D003934 ORTHO05D005108 1.6e-95 354.4 554 39.7
Actinidia34211 Actinidia chinensis HOM05D003934 ORTHO05D005108 2.1e-95 354.0 549 36.6
Actinidia08639 Actinidia chinensis HOM05D003934 ORTHO05D005108 2.7e-95 353.6 549 37.2
COL.COLO4_11261 Corchorus olitorius HOM05D003934 ORTHO05D005108 2.7e-95 353.6 549 40.1
TAR375G0202 Trochodendron aralioides HOM05D003934 ORTHO05D005108 2.7e-95 353.6 549 38.8
Phvul.009G053700 Phaseolus vulgaris HOM05D003934 ORTHO05D005108 3.5e-95 353.2 549 39.7
Lalb_Chr08g0240341 Lupinus albus HOM05D003934 ORTHO05D005108 7.9e-95 352.1 550 40.0
Thhalv10013305m.g Eutrema salsugineum HOM05D003934 ORTHO05D005108 1.0e-94 351.7 550 37.3
C02p02610 Brassica napus HOM05D003934 ORTHO05D005108 1.3e-94 351.3 548 38.5
Potri.012G012800 Populus trichocarpa HOM05D003934 ORTHO05D005108 1.8e-94 350.9 556 39.4
CiPaw.05G251900 Carya illinoinensis HOM05D003934 ORTHO05D005108 3.0e-94 350.1 550 39.8
BolC2t06227H Brassica oleracea HOM05D003934 ORTHO05D005108 5.1e-94 349.4 548 38.5
CsaV3_3G027880 Cucumis sativus L. HOM05D003934 ORTHO05D005108 5.1e-94 349.4 555 39.3
THA.LOC104816810 Tarenaya hassleriana HOM05D003934 ORTHO05D005108 5.1e-94 349.4 550 40.2
Thecc.03G196100 Theobroma cacao HOM05D003934 ORTHO05D005108 8.7e-94 348.6 549 39.3
FAN06G1603 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.1e-93 348.2 549 37.0
QL09p009520 Quercus lobata HOM05D003934 ORTHO05D005108 1.1e-93 348.2 554 39.2
FAN01G0480 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.5e-93 347.8 549 37.0
FAN03G1965 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.5e-93 347.8 549 37.0
Glyma.06G127500 Glycine max HOM05D003934 ORTHO05D005108 1.5e-93 347.8 549 39.2
Pp3c5_21100 Physcomitrium patens HOM05D003934 ORTHO05D005108 2.5e-93 347.1 550 39.3
Sed0008190 Sechium edule HOM05D003934 ORTHO05D005108 2.5e-93 347.1 554 39.9
Gohir.D09G179100 Gossypium hirsutum HOM05D003934 ORTHO05D005108 3.3e-93 346.7 549 39.3
Gorai.006G201100 Gossypium raimondii HOM05D003934 ORTHO05D005108 3.3e-93 346.7 549 39.3
CDE10G0405 Ceratophyllum demersum HOM05D003934 ORTHO05D005108 4.3e-93 346.3 549 41.0
Gohir.D11G243500 Gossypium hirsutum HOM05D003934 ORTHO05D005108 4.3e-93 346.3 550 39.6
AL6G16130 Arabidopsis lyrata HOM05D003934 ORTHO05D005108 5.7e-93 345.9 551 38.7
Gohir.A09G184300 Gossypium hirsutum HOM05D003934 ORTHO05D005108 7.4e-93 345.5 550 39.5
ATR0602G008 Amborella trichopoda HOM05D003934 ORTHO05D005108 1.6e-92 344.4 550 38.9
CARHR206870 Cardamine hirsuta HOM05D003934 ORTHO05D005108 1.6e-92 344.4 550 40.0
PSO170G4033 Papaver somniferum HOM05D003934 ORTHO05D005108 1.6e-92 344.4 555 38.7
RcHm_v2.0_Chr1g0331941 Rosa chinensis HOM05D003934 ORTHO05D005108 2.8e-92 343.6 550 36.9
Mapoly0116s0041 Marchantia polymorpha HOM05D003934 ORTHO05D005108 3.7e-92 343.2 551 39.6
Gohir.A11G232300 Gossypium hirsutum HOM05D003934 ORTHO05D005108 4.8e-92 342.8 550 39.6
Prupe.2G311500 Prunus persica HOM05D003934 ORTHO05D005108 6.3e-92 342.4 551 38.7
PSO063G5737 Papaver somniferum HOM05D003934 ORTHO05D005108 1.1e-91 341.7 555 38.7
Migut.F00226 Erythranthe guttata HOM05D003934 ORTHO05D005108 1.8e-91 340.9 551 34.7
AT5G06160 Arabidopsis thaliana HOM05D003934 ORTHO05D005108 4.1e-91 339.7 551 37.2
Lsat_1_v5_gn_9_58300 Lactuca sativa HOM05D003934 ORTHO05D005108 9.0e-91 338.6 551 35.8
Os03g0717600 Oryza sativa ssp. japonica HOM05D003934 ORTHO05D005108 2.0e-90 337.4 549 38.3
AUR62019377 Chenopodium quinoa HOM05D003934 ORTHO05D005108 6.5e-89 332.4 619 33.1
Peaxi162Scf00550g00530 Petunia axillaris HOM05D003934 ORTHO05D005108 6.5e-89 332.4 544 38.4
ECA232G2652 Erigeron canadensis HOM05D003934 ORTHO05D005108 9.4e-88 328.6 556 36.0
Atru.chr1.153 Acer truncatum HOM05D003934 ORTHO05D005108 1.2e-87 328.2 534 39.0
C03p02940 Brassica napus HOM05D003934 ORTHO05D005108 5.7e-85 319.3 551 35.0
MCO08G102 Micromonas commoda HOM05D003934 ORTHO05D005108 9.7e-85 318.5 547 39.3
TWI14G0523 Tripterygium wilfordii HOM05D003934 ORTHO05D005108 9.7e-85 318.5 389 46.0
A03p02600 Brassica napus HOM05D003934 ORTHO05D005108 2.8e-84 317.0 552 35.1
FvH4_7g06390 Fragaria vesca HOM05D003934 ORTHO05D005108 2.8e-84 317.0 549 35.3
BcaB01g05979 Brassica carinata HOM05D003934 ORTHO05D005108 4.8e-84 316.2 551 34.8
BolC3t12849H Brassica oleracea HOM05D003934 ORTHO05D005108 1.1e-83 315.1 554 34.8
BraA03t09621Z Brassica rapa HOM05D003934 ORTHO05D005108 1.1e-83 315.1 552 35.1
Ca_16696_v3 Cicer arietinum L. HOM05D003934 ORTHO05D005108 1.4e-83 314.7 550 38.4
Oeu041045.2 Olea europaea HOM05D003934 ORTHO05D005108 2.2e-81 307.4 598 33.4
FvH4_1g22860 Fragaria vesca HOM05D003934 ORTHO05D005108 2.9e-81 307.0 545 36.3
BcaB05g21680 Brassica carinata HOM05D003934 ORTHO05D005108 6.5e-81 305.8 486 38.9
SMO119G0296 Selaginella moellendorffii HOM05D003934 ORTHO05D005108 2.5e-80 303.9 556 37.9
FAN26G2519 Fragaria x ananassa HOM05D003934 ORTHO05D005108 9.4e-80 302.0 547 36.7
Cre06.g297750 Chlamydomonas reinhardtii HOM05D003934 ORTHO05D005108 1.6e-79 301.2 590 33.4
FAN23G2330 Fragaria x ananassa HOM05D003934 ORTHO05D005108 3.0e-78 297.0 546 35.7
HanXRQChr09g0252981 Helianthus annuus HOM05D003934 ORTHO05D005108 4.8e-76 289.7 503 35.8
FAN24G3520 Fragaria x ananassa HOM05D003934 ORTHO05D005108 9.1e-75 285.4 550 34.0
Zm00001eb156600 Zea mays HOM05D003934 ORTHO05D005108 3.5e-74 283.5 383 44.4
FAN19G2010 Fragaria x ananassa HOM05D003934 ORTHO05D005108 6.5e-73 279.3 546 35.9
Cfa023976 Carpinus fangiana HOM05D003934 ORTHO05D005108 2.5e-72 277.3 549 33.2
Cpa.g.sc3.69 Carica papaya HOM05D003934 ORTHO05D005108 4.2e-72 276.6 548 35.4
Sabra12G0018300 Salix brachista HOM05D003934 ORTHO05D005108 7.4e-69 265.8 591 33.5
vmacro06541 Vaccinium macrocarpon HOM05D003934 ORTHO05D005108 9.4e-64 248.8 549 31.0
AUR62031013 Chenopodium quinoa HOM05D003934 ORTHO05D005108 2.3e-62 244.2 394 38.6
AUR62019431 Chenopodium quinoa HOM05D003934 ORTHO05D005108 1.3e-60 238.4 391 36.8
FAN10G3094 Fragaria x ananassa HOM05D003934 ORTHO05D005108 2.8e-60 237.3 560 29.8
FAN18G2200 Fragaria x ananassa HOM05D003934 ORTHO05D005108 4.8e-60 236.5 454 33.3
Ah.07g205840 Amaranthus hybridus HOM05D003934 ORTHO05D005108 1.1e-59 235.3 550 30.4
FAN28G1126 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.4e-59 235.0 538 31.0
AUR62034796 Chenopodium quinoa HOM05D003934 ORTHO05D005108 7.0e-59 232.6 442 33.3
Haze_00188 Corylus avellana HOM05D003934 ORTHO05D005108 3.5e-58 230.3 574 32.8
HanXRQChr09g0252971 Helianthus annuus HOM05D003934 ORTHO05D005108 5.9e-58 229.6 585 29.7
MBI07_g07099_MAGBIO Magnolia biondii HOM05D003934 ORTHO05D005108 1.3e-57 228.4 249 47.0
Nitab4.5_0007081g0020 Nicotiana tabacum HOM05D003934 ORTHO05D005108 6.5e-57 226.1 549 31.0
Cfa016252 Carpinus fangiana HOM05D003934 ORTHO05D005108 1.1e-56 225.3 246 51.6
PRCOL_00004948 Prasinoderma coloniale HOM05D003934 ORTHO05D005108 1.5e-56 224.9 554 30.1
CBR_g4095 Chara braunii HOM05D003934 ORTHO05D005108 7.2e-56 222.6 546 30.0
ClCG05G008860 Citrullus lanatus HOM05D003934 ORTHO05D005108 1.4e-54 218.4 249 51.8
PSO782G1765 Papaver somniferum HOM05D003934 ORTHO05D005108 1.5e-53 214.9 563 29.3
SalBow4G2054 Salvia bowleyana HOM05D003934 ORTHO05D005108 8.3e-52 209.1 245 44.9
SalBow4G2493 Salvia bowleyana HOM05D003934 ORTHO05D005108 8.3e-52 209.1 245 44.9
Oeu041318.2 Olea europaea HOM05D003934 ORTHO05D005108 4.1e-51 206.8 549 30.8
ATR0602G148 Amborella trichopoda HOM05D003934 ORTHO05D005108 1.6e-47 194.9 180 57.8
DCAR_026768 Daucus carota HOM05D003934 ORTHO05D005108 4.7e-47 193.4 186 47.3
FvH4_5g28470 Fragaria vesca HOM05D003934 ORTHO05D005108 2.3e-46 191.0 517 28.8
DCAR_009017 Daucus carota HOM05D003934 ORTHO05D005108 5.2e-46 189.9 182 46.7
AUR62007347 Chenopodium quinoa HOM05D003934 ORTHO05D005108 1.2e-45 188.7 357 33.6
Sc25g0000870 Simmondsia chinensis HOM05D003934 ORTHO05D005108 5.7e-45 186.4 397 32.0
Aqoxy1G00997 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 2.8e-44 184.1 170 55.3
SEGI_10674 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 8.3e-44 182.6 127 59.8
FAN27G0411 Fragaria x ananassa HOM05D003934 ORTHO05D005108 5.9e-42 176.4 453 30.7
Gorai.007G258600 Gossypium raimondii HOM05D003934 ORTHO05D005108 1.7e-41 174.9 395 31.4
FvH4_7g05370 Fragaria vesca HOM05D003934 ORTHO05D005108 5.0e-41 173.3 576 28.1
FvH4_2g12040 Fragaria vesca HOM05D003934 ORTHO05D005108 2.5e-40 171.0 311 34.4
TPR.G17291 Trifolium pratense HOM05D003934 ORTHO05D005108 1.6e-39 168.3 329 33.1
FAN01G0659 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.4e-38 165.2 519 28.5
AagrBONN_evm.TU.Sc2ySwM_368.1804 Anthoceros agrestis HOM05D003934 ORTHO05D005108 2.6e-37 161.0 329 29.2
Prupe.2G260300 Prunus persica HOM05D003934 ORTHO05D005108 4.6e-34 150.2 460 28.7
Aqoxy1G00994 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 1.2e-31 142.1 134 47.8
FAN10G2167 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.2e-31 142.1 513 25.9
Aqoxy2G03740 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 2.6e-29 134.4 124 49.2
FAN10G1096 Fragaria x ananassa HOM05D003934 ORTHO05D005108 2.6e-29 134.4 409 27.4
SEGI_13482 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 1.1e-19 102.4 147 32.7
AUR62031016 Chenopodium quinoa HOM05D003934 ORTHO05D005108 2.3e-17 94.7 59 64.4
Sp5g08830 Schrenkiella parvula HOM05D003934 ORTHO05D005108 4.0e-14 84.0 188 32.4
A07p21690 Brassica napus HOM05D003934 ORTHO05D019879 1.3e-12 79.0 73 43.8
BraA07t29851Z Brassica rapa HOM05D003934 ORTHO05D019879 1.3e-12 79.0 73 43.8
BolC6t37330H Brassica oleracea HOM05D003934 ORTHO05D019879 2.9e-12 77.8 73 43.8
BcaC08g44628 Brassica carinata HOM05D003934 ORTHO05D019879 3.8e-12 77.4 73 43.8
C06p21480 Brassica napus HOM05D003934 ORTHO05D019879 3.8e-12 77.4 73 43.8
Aqoxy1G01000 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 3.0e-09 67.8 57 52.6
MBI07_g07098_MAGBIO Magnolia biondii HOM05D003934 ORTHO05D005108 8.7e-09 66.2 117 30.8
BcaB02g07780 Brassica carinata HOM05D003934 ORTHO05D019879 1.9e-08 65.1 73 39.7
SEGI_10754 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 2.5e-08 64.7 107 31.8
MCO02G408 Micromonas commoda HOM05D004310 ORTHO05D005403 2.1e-07 61.6 71 43.7
SEGI_36975 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 6.2e-07 60.1 101 27.7
SEGI_13646 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 8.1e-07 59.7 95 35.8
SEGI_10710 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 1.1e-06 59.3 82 43.9
HanXRQChr09g0252591 Helianthus annuus HOM05D003934 ORTHO05D019879 1.4e-06 58.9 49 49.0
Lalb_Chr18g0044401 Lupinus albus HOM05D004310 ORTHO05D005403 6.9e-06 56.6 65 46.2


User provided reference genes

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