Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25328 Corylus avellana HOM05D002182 ORTHO05D017531 2.0e-106 389.0 189 100.0
Cfa002178 Carpinus fangiana HOM05D002182 ORTHO05D004671 1.9e-64 249.6 124 96.8
CiPaw.04G079900 Carya illinoinensis HOM05D002182 ORTHO05D004671 2.3e-54 216.1 120 83.3
Dinv35485 Davidia involucrata HOM05D002182 ORTHO05D004671 1.1e-48 197.2 118 77.1
Thecc.01G137400 Theobroma cacao HOM05D002182 ORTHO05D004671 8.9e-46 187.6 124 72.6
Potri.005G067100 Populus trichocarpa HOM05D002182 ORTHO05D004671 7.6e-45 184.5 133 66.9
Lalb_Chr11g0068591 Lupinus albus HOM05D002182 ORTHO05D004671 2.9e-44 182.6 133 68.4
VMungo1309G0220 Vigna mungo HOM05D002182 ORTHO05D004671 3.8e-44 182.2 135 65.9
MD15G1134700 Malus domestica HOM05D002182 ORTHO05D004671 1.1e-43 180.6 124 68.5
CSS0000135 Camellia sinensis var. sinensis HOM05D002182 ORTHO05D017531 5.4e-43 178.3 120 71.7
GSVIVG01026461001 Vitis vinifera HOM05D002182 ORTHO05D004671 2.7e-42 176.0 132 65.9
arahy.Tifrunner.gnm1.ann1.K5KUZ3 Arachis hypogaea HOM05D002182 ORTHO05D004671 1.3e-41 173.7 150 60.0
Phvul.009G154850 Phaseolus vulgaris HOM05D002182 ORTHO05D004671 1.3e-41 173.7 134 62.7
TWI79G1433 Tripterygium wilfordii HOM05D002182 ORTHO05D004671 2.3e-41 172.9 117 70.1
Gorai.007G066700 Gossypium raimondii HOM05D002182 ORTHO05D004671 5.1e-41 171.8 118 70.3
ClCG10G017010 Citrullus lanatus HOM05D002182 ORTHO05D004671 6.6e-41 171.4 131 65.6
Actinidia20028 Actinidia chinensis HOM05D002182 ORTHO05D004671 8.7e-41 171.0 124 69.4
arahy.Tifrunner.gnm1.ann1.XVSB6Y Arachis hypogaea HOM05D002182 ORTHO05D004671 8.7e-41 171.0 150 59.3
Glyma.06G155600 Glycine max HOM05D002182 ORTHO05D004671 8.7e-41 171.0 130 63.1
Rhsim10G0124100 Rhododendron simsii HOM05D002182 ORTHO05D004671 1.1e-40 170.6 124 68.5
CSS0041549 Camellia sinensis var. sinensis HOM05D002182 ORTHO05D004671 1.9e-40 169.9 122 68.0
COL.COLO4_35815 Corchorus olitorius HOM05D002182 ORTHO05D004671 2.5e-40 169.5 124 68.5
Duzib264G0915 Durio zibethinus HOM05D002182 ORTHO05D004671 2.5e-40 169.5 120 65.0
Gohir.D11G061900 Gossypium hirsutum HOM05D002182 ORTHO05D004671 3.3e-40 169.1 118 69.5
Lj1g0008046 Lotus japonicus HOM05D002182 ORTHO05D004671 7.3e-40 167.9 152 57.2
TPR.G33581 Trifolium pratense HOM05D002182 ORTHO05D004671 7.3e-40 167.9 124 66.9
CANSAT01G2275 Cannabis sativa HOM05D002182 ORTHO05D004671 1.2e-39 167.2 119 67.2
Gohir.A11G057700 Gossypium hirsutum HOM05D002182 ORTHO05D004671 3.6e-39 165.6 120 66.7
RcHm_v2.0_Chr2g0122231 Rosa chinensis HOM05D002182 ORTHO05D004671 6.2e-39 164.9 122 67.2
Oeu050090.2 Olea europaea HOM05D002182 ORTHO05D004671 1.4e-38 163.7 136 62.5
Atru.chr4.980 Acer truncatum HOM05D002182 ORTHO05D004671 1.8e-38 163.3 124 62.9
vmacro12745 Vaccinium macrocarpon HOM05D002182 ORTHO05D004671 3.1e-38 162.5 125 68.8
Ca_16979_v3 Cicer arietinum L. HOM05D002182 ORTHO05D004671 4.0e-38 162.2 142 56.3
Prupe.4G275500 Prunus persica HOM05D002182 ORTHO05D004671 4.0e-38 162.2 122 61.5
Hund21801 Selenicereus undatus HOM05D002182 ORTHO05D004671 6.9e-38 161.4 118 64.4
Manes.13G078050 Manihot esculenta HOM05D002182 ORTHO05D004671 9.0e-38 161.0 119 70.6
Sabra05G0055200 Salix brachista HOM05D002182 ORTHO05D004671 1.2e-37 160.6 181 48.6
CsaV3_3G039390 Cucumis sativus L. HOM05D002182 ORTHO05D004671 2.6e-37 159.5 137 58.4
Sc16g0009510 Simmondsia chinensis HOM05D002182 ORTHO05D004671 3.4e-37 159.1 117 65.8
FvH4_1g24710 Fragaria vesca HOM05D002182 ORTHO05D004671 7.6e-37 157.9 123 64.2
TAR376G0522 Trochodendron aralioides HOM05D002182 ORTHO05D004671 9.9e-37 157.5 136 57.4
Nitab4.5_0001277g0010 Nicotiana tabacum HOM05D002182 ORTHO05D004671 2.4e-35 152.9 132 58.3
Sopen05g009910 Solanum pennellii HOM05D002182 ORTHO05D004671 3.2e-35 152.5 139 56.1
MELO3C009682.2 Cucumis melo HOM05D002182 ORTHO05D004671 5.4e-35 151.8 140 54.3
Cc07_g19240 Coffea canephora HOM05D002182 ORTHO05D004671 1.2e-34 150.6 118 63.6
CAN.G163.2 Capsicum annuum HOM05D002182 ORTHO05D004671 6.0e-34 148.3 138 55.8
Sed0010212 Sechium edule HOM05D002182 ORTHO05D004671 6.0e-34 148.3 124 59.7
Solyc05g014720.4 Solanum lycopersicum HOM05D002182 ORTHO05D004671 3.0e-33 146.0 133 56.4
Eucgr.H05141 Eucalyptus grandis HOM05D002182 ORTHO05D004671 8.7e-33 144.4 117 62.4
EL10Ac4g09621 Beta vulgaris HOM05D002182 ORTHO05D004671 5.6e-32 141.7 168 47.0
Migut.H00803 Erythranthe guttata HOM05D002182 ORTHO05D004671 1.3e-31 140.6 118 59.3
Aqoxy5G02289 Aquilegia oxysepala HOM05D002182 ORTHO05D004671 1.6e-31 140.2 131 55.0
Ah.06g191020 Amaranthus hybridus HOM05D002182 ORTHO05D004671 1.4e-30 137.1 131 54.2
ATR1001G007 Amborella trichopoda HOM05D002182 ORTHO05D004671 4.0e-30 135.6 119 55.5
Psat5g060640 Pisum sativum HOM05D002182 ORTHO05D004671 1.5e-29 133.7 100 66.0
C02p63020 Brassica napus HOM05D002182 ORTHO05D017531 5.8e-29 131.7 124 52.4
PGR102G1182 Punica granatum HOM05D002182 ORTHO05D004671 7.6e-29 131.3 122 55.7
CDE09G0036 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 1.3e-28 130.6 161 45.3
A02p43050 Brassica napus HOM05D002182 ORTHO05D004671 2.2e-28 129.8 124 52.4
BraA02t09226Z Brassica rapa HOM05D002182 ORTHO05D004671 2.2e-28 129.8 124 52.4
Medtr3g096640 Medicago truncatula HOM05D002182 ORTHO05D004671 2.2e-28 129.8 150 50.0
ECA248G2894 Erigeron canadensis HOM05D002182 ORTHO05D004671 8.4e-28 127.9 118 53.4
Nn5g28440 Nelumbo nucifera HOM05D002182 ORTHO05D004671 1.4e-27 127.1 179 45.3
THA.LOC104818422 Tarenaya hassleriana HOM05D002182 ORTHO05D004671 1.9e-27 126.7 122 50.8
Ah.06g191010 Amaranthus hybridus HOM05D002617 ORTHO05D009035 3.2e-27 125.9 125 53.6
BcaB07g29709 Brassica carinata HOM05D002182 ORTHO05D004671 7.1e-27 124.8 124 50.0
MBI07_g43314_MAGBIO Magnolia biondii HOM05D002182 ORTHO05D004671 7.1e-27 124.8 115 55.7
Sp2g26990 Schrenkiella parvula HOM05D002182 ORTHO05D004671 7.1e-27 124.8 127 49.6
Aa31LG1G17970 Aethionema arabicum HOM05D002182 ORTHO05D004671 4.6e-26 122.1 112 55.4
Thhalv10003618m.g Eutrema salsugineum HOM05D002182 ORTHO05D004671 4.6e-26 122.1 125 48.8
AL8G41160 Arabidopsis lyrata HOM05D002182 ORTHO05D004671 7.9e-26 121.3 121 48.8
HanXRQChr01g0016921 Helianthus annuus HOM05D002182 ORTHO05D004671 7.9e-26 121.3 119 51.3
BcaC03g18232 Brassica carinata HOM05D002182 ORTHO05D004671 1.3e-25 120.6 124 49.2
Carub.0008s2470 Capsella rubella HOM05D002182 ORTHO05D004671 3.9e-25 119.0 123 48.8
AT5G63920 Arabidopsis thaliana HOM05D002182 ORTHO05D004671 1.1e-24 117.5 123 46.3
FAN26G1134 Fragaria x ananassa HOM05D002182 ORTHO05D004671 1.9e-24 116.7 108 60.2
HPP92_005917 Vanilla planifolia HOM05D002182 ORTHO05D004671 2.9e-20 102.8 165 41.8
Zm00001eb005010 Zea mays HOM05D002182 ORTHO05D004671 1.1e-19 100.9 113 48.7
PSO384G2582 Papaver somniferum HOM05D002182 ORTHO05D004671 4.2e-19 99.0 136 45.6
PSO443G0075 Papaver somniferum HOM05D002182 ORTHO05D004671 7.1e-19 98.2 139 42.4
SGA_v2.0_scaffold54G19590 Striga asiatica HOM05D002182 ORTHO05D004671 1.6e-18 97.1 99 54.5
Lj4C830T7 Lonicera japonica HOM05D002182 ORTHO05D004671 6.0e-18 95.1 83 57.8
Os03g0165000 Oryza sativa ssp. japonica HOM05D002182 ORTHO05D004671 7.9e-18 94.7 132 40.9
Cpa.g.c33573 Carica papaya HOM05D002182 ORTHO05D017531 1.3e-17 94.0 79 59.5
AUR62006857 Chenopodium quinoa HOM05D002182 ORTHO05D004671 4.3e-16 89.0 77 55.8
SHI36070 Sapria himalayana HOM05D002182 ORTHO05D004671 6.9e-14 81.6 70 58.6
Pp3c21_9710 Physcomitrium patens HOM05D002182 ORTHO05D004671 2.0e-13 80.1 141 37.6
FAN19G2097 Fragaria x ananassa HOM05D002182 ORTHO05D004671 7.6e-13 78.2 49 75.5
BolC3t18503H Brassica oleracea HOM05D002182 ORTHO05D017531 3.8e-12 75.9 78 50.0
Mapoly0113s0011 Marchantia polymorpha HOM05D002182 ORTHO05D004671 4.2e-11 72.4 143 32.9
unitig_62.g23375 Utricularia gibba HOM05D002182 ORTHO05D004671 5.5e-11 72.0 97 44.3
A06p30540 Brassica napus HOM05D002182 ORTHO05D017531 3.0e-09 66.2 79 46.8
BraA06t26003Z Brassica rapa HOM05D002182 ORTHO05D017531 3.0e-09 66.2 79 46.8
Lsat_1_v5_gn_1_78841 Lactuca sativa HOM05D002182 ORTHO05D004671 6.7e-09 65.1 41 63.4
AagrBONN_evm.TU.Sc2ySwM_228.5819 Anthoceros agrestis HOM05D002182 ORTHO05D004671 1.9e-08 63.5 54 51.9
BcaC01g02646 Brassica carinata HOM05D002182 ORTHO05D017531 6.3e-07 58.5 78 43.6
SEGI_24428 Sequoiadendron giganteum HOM05D002182 ORTHO05D017531 8.2e-07 58.2 118 39.8
FAN23G2071 Fragaria x ananassa HOM05D002182 ORTHO05D004671 6.9e-06 55.1 32 71.9


User provided reference genes

Program Settings