Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_16325 Corylus avellana HOM05D005550 ORTHO05D006679 6.4e-79 297.4 152 100.0
RcHm_v2.0_Chr7g0203731 Rosa chinensis HOM05D005550 ORTHO05D006679 6.7e-68 260.8 143 93.0
FvH4_5g19230 Fragaria vesca HOM05D005550 ORTHO05D006679 1.5e-67 259.6 143 92.3
FAN04G3230 Fragaria x ananassa HOM05D005550 ORTHO05D006679 1.5e-67 259.6 143 92.3
FAN08G0299 Fragaria x ananassa HOM05D005550 ORTHO05D006679 1.5e-67 259.6 143 92.3
QL12p011636 Quercus lobata HOM05D005550 ORTHO05D006679 1.5e-67 259.6 143 92.3
Thecc.03G248800 Theobroma cacao HOM05D005550 ORTHO05D006679 2.5e-67 258.8 143 90.2
CiPaw.11G081300 Carya illinoinensis HOM05D005550 ORTHO05D006679 3.3e-67 258.5 143 90.9
GSVIVG01004726001 Vitis vinifera HOM05D005550 ORTHO05D006679 7.4e-67 257.3 141 92.9
CANSAT21G2208 Cannabis sativa HOM05D005550 ORTHO05D006679 9.6e-67 256.9 140 92.1
Gorai.008G234100 Gossypium raimondii HOM05D005550 ORTHO05D006679 1.3e-66 256.5 143 90.2
TWI15G1253 Tripterygium wilfordii HOM05D005550 ORTHO05D006679 2.1e-66 255.8 143 90.2
Atru.chr9.1288 Acer truncatum HOM05D005550 ORTHO05D006679 2.8e-66 255.4 143 90.2
COL.COLO4_37144 Corchorus olitorius HOM05D005550 ORTHO05D006679 2.8e-66 255.4 143 90.2
Sed0012504 Sechium edule HOM05D005550 ORTHO05D006679 2.8e-66 255.4 143 90.2
Hma1.2p1_1136F.1_g260510 Hydrangea macrophylla HOM05D005550 ORTHO05D006679 3.7e-66 255.0 143 88.1
Hma1.2p1_1136F.1_g260520 Hydrangea macrophylla HOM05D005550 ORTHO05D006679 3.7e-66 255.0 143 88.1
Prupe.5G066100 Prunus persica HOM05D005550 ORTHO05D006679 3.7e-66 255.0 143 91.6
Gohir.D12G218532 Gossypium hirsutum HOM05D005550 ORTHO05D006679 4.8e-66 254.6 143 89.5
Actinidia02146 Actinidia chinensis HOM05D005550 ORTHO05D006679 6.3e-66 254.2 143 88.1
Duzib068G0290 Durio zibethinus HOM05D005550 ORTHO05D006679 6.3e-66 254.2 143 89.5
Lj2C221G5 Lonicera japonica HOM05D005550 ORTHO05D006679 4.1e-65 251.5 139 89.9
CSS0014382 Camellia sinensis var. sinensis HOM05D005550 ORTHO05D006679 2.0e-64 249.2 143 86.7
HanXRQChr06g0164431 Helianthus annuus HOM05D005550 ORTHO05D006679 2.0e-64 249.2 143 86.0
FAN18G0162 Fragaria x ananassa HOM05D005550 ORTHO05D006679 2.6e-64 248.8 143 90.2
MSTRG.12114 Avicennia marina HOM05D005550 ORTHO05D006679 3.4e-64 248.4 143 85.3
Rhsim11G0009700 Rhododendron simsii HOM05D005550 ORTHO05D006679 3.4e-64 248.4 143 86.7
Migut.A01122 Erythranthe guttata HOM05D005550 ORTHO05D006679 1.3e-63 246.5 140 86.4
Ciclev10018920m.g Citrus clementina HOM05D005550 ORTHO05D006679 2.9e-63 245.4 143 85.3
MELO3C005519.2 Cucumis melo HOM05D005550 ORTHO05D006679 3.8e-63 245.0 143 88.1
Potri.001G156200 Populus trichocarpa HOM05D005550 ORTHO05D006679 3.8e-63 245.0 143 86.0
TAR375G0818 Trochodendron aralioides HOM05D005550 ORTHO05D006679 3.8e-63 245.0 141 85.8
ClCG01G004190 Citrullus lanatus HOM05D005550 ORTHO05D006679 8.5e-63 243.8 143 88.1
Lsat_1_v5_gn_3_1200 Lactuca sativa HOM05D005550 ORTHO05D006679 1.1e-62 243.4 144 86.1
MBI04_g09523_MAGBIO Magnolia biondii HOM05D005550 ORTHO05D006679 1.4e-62 243.0 143 86.7
PGR042G2104 Punica granatum HOM05D005550 ORTHO05D006679 1.4e-62 243.0 143 86.7
Sopen08g003270 Solanum pennellii HOM05D005550 ORTHO05D006679 1.4e-62 243.0 143 83.2
SGA_v2.0_scaffold104G30171 Striga asiatica HOM05D005550 ORTHO05D006679 1.4e-62 243.0 143 83.2
PSO063G2362 Papaver somniferum HOM05D005550 ORTHO05D006679 1.9e-62 242.7 148 84.5
Glyma.11G034600 Glycine max HOM05D005550 ORTHO05D006679 3.2e-62 241.9 143 83.2
ECA248G1640 Erigeron canadensis HOM05D005550 ORTHO05D006679 4.2e-62 241.5 142 83.1
Solyc08g007330.3 Solanum lycopersicum HOM05D005550 ORTHO05D006679 4.2e-62 241.5 143 83.2
unitig_744.g24475 Utricularia gibba HOM05D005550 ORTHO05D006679 4.2e-62 241.5 143 84.6
Aqoxy7G00819 Aquilegia oxysepala HOM05D005550 ORTHO05D006679 5.5e-62 241.1 142 85.2
CsaV3_5G004390 Cucumis sativus L. HOM05D005550 ORTHO05D006679 7.2e-62 240.7 137 88.3
Nitab4.5_0002225g0010 Nicotiana tabacum HOM05D005550 ORTHO05D006679 1.2e-61 240.0 143 83.2
Sc22g0000960 Simmondsia chinensis HOM05D005550 ORTHO05D006679 1.2e-61 240.0 143 82.5
PSO782G0795 Papaver somniferum HOM05D005550 ORTHO05D006679 1.6e-61 239.6 139 86.3
Nn6g33903 Nelumbo nucifera HOM05D005550 ORTHO05D006679 2.7e-61 238.8 138 85.5
THA.LOC104812808 Tarenaya hassleriana HOM05D005550 ORTHO05D006679 3.6e-61 238.4 143 84.6
AL7G37330 Arabidopsis lyrata HOM05D005550 ORTHO05D006679 4.6e-61 238.0 143 86.0
AT4G17380 Arabidopsis thaliana HOM05D005550 ORTHO05D006679 4.6e-61 238.0 143 86.0
BolC8t48465H Brassica oleracea HOM05D005550 ORTHO05D006679 4.6e-61 238.0 143 86.0
Thhalv10024454m.g Eutrema salsugineum HOM05D005550 ORTHO05D006679 4.6e-61 238.0 143 86.0
BcaC07g38064 Brassica carinata HOM05D005550 ORTHO05D006679 6.1e-61 237.7 143 85.3
Carub.0007s2403 Capsella rubella HOM05D005550 ORTHO05D006679 6.1e-61 237.7 143 85.3
Nitab4.5_0000712g0130 Nicotiana tabacum HOM05D005550 ORTHO05D006679 6.1e-61 237.7 149 80.5
BraA08t33293Z Brassica rapa HOM05D005550 ORTHO05D006679 1.3e-60 236.5 143 84.6
CARHR223990 Cardamine hirsuta HOM05D005550 ORTHO05D006679 1.8e-60 236.1 143 84.6
Cc08_g12230 Coffea canephora HOM05D005550 ORTHO05D006679 1.8e-60 236.1 141 81.6
Eucgr.E00409 Eucalyptus grandis HOM05D005550 ORTHO05D006679 2.3e-60 235.7 143 83.9
Phvul.002G057100 Phaseolus vulgaris HOM05D005550 ORTHO05D006679 2.3e-60 235.7 143 81.8
BcaB04g18410 Brassica carinata HOM05D005550 ORTHO05D006679 3.0e-60 235.3 151 82.1
A08p13130 Brassica napus HOM05D005550 ORTHO05D006679 3.9e-60 235.0 143 84.6
VMungo1215G0570 Vigna mungo HOM05D005550 ORTHO05D006679 3.9e-60 235.0 143 83.2
Sabra01G0134700 Salix brachista HOM05D005550 ORTHO05D006679 5.1e-60 234.6 143 82.5
EL10Ac5g12365 Beta vulgaris HOM05D005550 ORTHO05D006679 6.7e-60 234.2 143 83.9
Hund11605 Selenicereus undatus HOM05D005550 ORTHO05D006679 8.7e-60 233.8 143 81.1
arahy.Tifrunner.gnm1.ann1.7NLF36 Arachis hypogaea HOM05D005550 ORTHO05D006679 1.9e-59 232.6 143 82.5
arahy.Tifrunner.gnm1.ann1.XE7N8H Arachis hypogaea HOM05D005550 ORTHO05D006679 1.9e-59 232.6 143 82.5
AUR62019968 Chenopodium quinoa HOM05D005550 ORTHO05D006679 2.5e-59 232.3 143 82.5
Lj2g0021636 Lotus japonicus HOM05D005550 ORTHO05D006679 2.5e-59 232.3 140 81.4
Medtr5g012900 Medicago truncatula HOM05D005550 ORTHO05D006679 4.3e-59 231.5 140 82.1
Ca_24591_v3 Cicer arietinum L. HOM05D005550 ORTHO05D006679 2.2e-58 229.2 143 79.7
AUR62007105 Chenopodium quinoa HOM05D005550 ORTHO05D006679 2.8e-58 228.8 143 81.8
SHI20465 Sapria himalayana HOM05D005550 ORTHO05D006679 5.3e-57 224.6 140 82.1
TPR.G18117 Trifolium pratense HOM05D005550 ORTHO05D006679 1.5e-56 223.0 143 77.6
Os07g0486000 Oryza sativa ssp. japonica HOM05D005550 ORTHO05D006679 4.5e-56 221.5 136 80.9
Psat2g176640 Pisum sativum HOM05D005550 ORTHO05D006679 4.5e-56 221.5 143 76.2
BolC8t48469H Brassica oleracea HOM05D005550 ORTHO05D006679 1.0e-55 220.3 131 86.3
ATR0057G027 Amborella trichopoda HOM05D005550 ORTHO05D006679 2.2e-55 219.2 140 75.0
Aa31LG6G120 Aethionema arabicum HOM05D005550 ORTHO05D006679 5.0e-55 218.0 158 74.7
SalBow6G3355 Salvia bowleyana HOM05D005550 ORTHO05D006679 8.5e-55 217.2 173 66.5
vmacro00189 Vaccinium macrocarpon HOM05D005550 ORTHO05D006679 7.4e-51 204.1 118 86.4
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 2.8e-50 202.2 122 82.0
Lalb_Chr16g0379511 Lupinus albus HOM05D005550 ORTHO05D006679 1.4e-49 199.9 156 69.2
SEGI_18944 Sequoiadendron giganteum HOM05D005550 ORTHO05D006679 6.9e-49 197.6 136 72.8
HPP92_025386 Vanilla planifolia HOM05D005550 ORTHO05D006679 1.7e-42 176.4 122 72.1
Peaxi162Scf00102g01071 Petunia axillaris HOM05D005550 ORTHO05D006679 1.2e-40 170.2 122 73.0
Mapoly0001s0167 Marchantia polymorpha HOM05D005550 ORTHO05D006679 7.2e-38 161.0 130 59.2
Pp3c2_940 Physcomitrium patens HOM05D005550 ORTHO05D006679 3.6e-37 158.7 132 56.8
AagrBONN_evm.TU.Sc2ySwM_344.184 Anthoceros agrestis HOM05D005550 ORTHO05D006679 8.0e-37 157.5 140 52.9
BcaC07g38067 Brassica carinata HOM05D005550 ORTHO05D006679 5.2e-36 154.8 91 87.9
Cpa.g.sc29.180 Carica papaya HOM05D005550 ORTHO05D006679 1.5e-35 153.3 92 82.6
MD04G1062200 Malus domestica HOM05D005550 ORTHO05D006679 1.5e-35 153.3 84 90.5
DCAR_006840 Daucus carota HOM05D005550 ORTHO05D006679 5.0e-31 138.3 84 79.8
CDE04G2441 Ceratophyllum demersum HOM05D005550 ORTHO05D006679 2.7e-29 132.5 85 72.9
SMO340G0170 Selaginella moellendorffii HOM05D005550 ORTHO05D006679 3.4e-27 125.6 141 49.6
MBI06_g10737_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D011024 8.6e-15 84.3 50 78.0
Nn1g05728 Nelumbo nucifera HOM05D005550 ORTHO05D006679 1.6e-13 80.1 57 73.7
Nn1g05737 Nelumbo nucifera HOM05D005550 ORTHO05D006679 1.6e-13 80.1 57 73.7
MBI15_g30439_MAGBIO Magnolia biondii HOM05D005550 ORTHO05D011024 1.2e-11 73.9 41 82.9
MBI06_g16692_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D008292 3.4e-11 72.4 46 73.9
Potri.003G078601 Populus trichocarpa HOM05D005550 ORTHO05D006679 9.8e-11 70.9 42 81.0
PRCOL_00003604 Prasinoderma coloniale HOM05D005550 ORTHO05D006679 7.8e-08 61.2 139 33.1
CBR_g547 Chara braunii HOM05D005550 ORTHO05D006679 2.5e-06 56.2 111 35.1


User provided reference genes

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