Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr14g0453721 Helianthus annuus HOM05D006044 ORTHO05D007653 3.4e-65 251.5 126 100.0
HanXRQChr07g0196181 Helianthus annuus HOM05D006044 ORTHO05D007653 4.9e-64 247.7 126 98.4
Lsat_1_v5_gn_2_111680 Lactuca sativa HOM05D006044 ORTHO05D007653 1.1e-63 246.5 125 98.4
Lsat_1_v5_gn_2_28381 Lactuca sativa HOM05D006044 ORTHO05D007653 5.4e-63 244.2 126 96.8
Ca_11896_v3 Cicer arietinum L. HOM05D006044 ORTHO05D007653 8.6e-61 236.9 123 92.7
Ca_06201_v3 Cicer arietinum L. HOM05D006044 ORTHO05D007653 1.9e-60 235.7 123 92.7
arahy.Tifrunner.gnm1.ann1.6RB8S0 Arachis hypogaea HOM05D006044 ORTHO05D007653 2.5e-60 235.3 123 93.5
arahy.Tifrunner.gnm1.ann1.L4QR06 Arachis hypogaea HOM05D006044 ORTHO05D007653 2.5e-60 235.3 123 93.5
Cc03_g11600 Coffea canephora HOM05D006044 ORTHO05D007653 2.5e-60 235.3 125 95.2
Nitab4.5_0000069g0030 Nicotiana tabacum HOM05D006044 ORTHO05D007653 2.5e-60 235.3 123 94.3
Nitab4.5_0011609g0020 Nicotiana tabacum HOM05D006044 ORTHO05D007653 2.5e-60 235.3 123 94.3
Manes.01G177500 Manihot esculenta HOM05D006044 ORTHO05D007653 3.3e-60 235.0 123 93.5
Aa31LG3G15040 Aethionema arabicum HOM05D006044 ORTHO05D007653 4.2e-60 234.6 123 93.5
CSS0014603 Camellia sinensis var. sinensis HOM05D006044 ORTHO05D007653 4.2e-60 234.6 123 93.5
Cpa.g.sc157.53 Carica papaya HOM05D006044 ORTHO05D007653 4.2e-60 234.6 123 93.5
TPR.G16400 Trifolium pratense HOM05D006044 ORTHO05D007653 4.2e-60 234.6 126 92.1
LjContig00564g0010691 Lotus japonicus HOM05D006044 ORTHO05D007653 5.6e-60 234.2 126 91.3
Peaxi162Scf00021g02522 Petunia axillaris HOM05D006044 ORTHO05D007653 7.2e-60 233.8 123 94.3
ECA238G3020 Erigeron canadensis HOM05D006044 ORTHO05D007653 9.5e-60 233.4 123 94.3
Medtr5g089300 Medicago truncatula HOM05D006044 ORTHO05D007653 1.6e-59 232.6 123 91.9
Oeu032567.1 Olea europaea HOM05D006044 ORTHO05D007653 1.6e-59 232.6 119 95.8
CANSAT11G0073 Cannabis sativa HOM05D006044 ORTHO05D007653 2.1e-59 232.3 123 91.9
Glyma.02G278800 Glycine max HOM05D006044 ORTHO05D007653 2.1e-59 232.3 123 91.9
Lalb_Chr10g0106211 Lupinus albus HOM05D006044 ORTHO05D007653 2.1e-59 232.3 123 91.9
Lalb_Chr17g0347851 Lupinus albus HOM05D006044 ORTHO05D007653 2.1e-59 232.3 123 91.9
Phvul.008G202000 Phaseolus vulgaris HOM05D006044 ORTHO05D007653 2.1e-59 232.3 123 91.9
VMungo0647G0704 Vigna mungo HOM05D006044 ORTHO05D007653 2.1e-59 232.3 123 91.9
Atru.chr3.2998 Acer truncatum HOM05D006044 ORTHO05D007653 2.8e-59 231.9 123 91.9
Glyma.14G035900 Glycine max HOM05D006044 ORTHO05D007653 2.8e-59 231.9 123 91.1
Rhsim13G0207900 Rhododendron simsii HOM05D006044 ORTHO05D007653 2.8e-59 231.9 123 92.7
Sc12g0010240 Simmondsia chinensis HOM05D006044 ORTHO05D007653 2.8e-59 231.9 123 92.7
Nn7g36759 Nelumbo nucifera HOM05D006044 ORTHO05D007653 4.7e-59 231.1 123 91.9
Psat2g020640 Pisum sativum HOM05D006044 ORTHO05D007653 4.7e-59 231.1 123 91.1
QL01p016848 Quercus lobata HOM05D006044 ORTHO05D007653 6.1e-59 230.7 123 91.1
THA.LOC104811201 Tarenaya hassleriana HOM05D006044 ORTHO05D007653 6.1e-59 230.7 123 91.1
ATR0763G184 Amborella trichopoda HOM05D006044 ORTHO05D007653 8.0e-59 230.3 123 91.9
Solyc01g008360.3 Solanum lycopersicum HOM05D006044 ORTHO05D007653 8.0e-59 230.3 119 94.1
Sopen01g003880 Solanum pennellii HOM05D006044 ORTHO05D007653 8.0e-59 230.3 119 94.1
PGSC0003DMG400016393 Solanum tuberosum HOM05D006044 ORTHO05D007653 8.0e-59 230.3 119 94.1
GSVIVG01037329001 Vitis vinifera HOM05D006044 ORTHO05D007653 8.0e-59 230.3 120 94.2
THA.LOC104799136 Tarenaya hassleriana HOM05D006044 ORTHO05D007653 1.0e-58 229.9 123 91.1
TAR633G2719 Trochodendron aralioides HOM05D006044 ORTHO05D007653 1.0e-58 229.9 123 91.1
Gohir.A13G218400 Gossypium hirsutum HOM05D006044 ORTHO05D007653 1.8e-58 229.2 123 91.1
Gohir.D13G222100 Gossypium hirsutum HOM05D006044 ORTHO05D007653 1.8e-58 229.2 123 91.1
Gorai.013G253200 Gossypium raimondii HOM05D006044 ORTHO05D007653 1.8e-58 229.2 123 91.1
Potri.001G273200 Populus trichocarpa HOM05D006044 ORTHO05D007653 1.8e-58 229.2 121 92.6
Thecc.09G247200 Theobroma cacao HOM05D006044 ORTHO05D007653 2.3e-58 228.8 123 90.2
Eucgr.B03747 Eucalyptus grandis HOM05D006044 ORTHO05D007653 3.0e-58 228.4 123 91.1
unitig_27.g25012 Utricularia gibba HOM05D006044 ORTHO05D007653 3.0e-58 228.4 119 94.1
A03p05430 Brassica napus HOM05D006044 ORTHO05D007653 4.0e-58 228.0 123 91.1
C03p06320 Brassica napus HOM05D006044 ORTHO05D007653 4.0e-58 228.0 123 91.1
BolC3t13140H Brassica oleracea HOM05D006044 ORTHO05D007653 4.0e-58 228.0 123 91.1
BraA03t09881Z Brassica rapa HOM05D006044 ORTHO05D007653 4.0e-58 228.0 123 91.1
FvH4_4g01940 Fragaria vesca HOM05D006044 ORTHO05D007653 4.0e-58 228.0 123 89.4
FAN12G1761 Fragaria x ananassa HOM05D006044 ORTHO05D007653 4.0e-58 228.0 123 89.4
FAN22G1152 Fragaria x ananassa HOM05D006044 ORTHO05D007653 4.0e-58 228.0 123 89.4
Prupe.1G025000 Prunus persica HOM05D006044 ORTHO05D007653 4.0e-58 228.0 123 90.2
PGR102G0082 Punica granatum HOM05D006044 ORTHO05D007653 4.0e-58 228.0 123 90.2
RcHm_v2.0_Chr4g0388901 Rosa chinensis HOM05D006044 ORTHO05D007653 4.0e-58 228.0 123 89.4
PSO339G3702 Papaver somniferum HOM05D006044 ORTHO05D007653 5.2e-58 227.6 123 91.1
PSO384G3308 Papaver somniferum HOM05D006044 ORTHO05D007653 5.2e-58 227.6 123 91.1
BolC9t59301H Brassica oleracea HOM05D004351 ORTHO05D005196 6.8e-58 227.3 123 90.2
ClCG02G022780 Citrullus lanatus HOM05D006044 ORTHO05D007653 6.8e-58 227.3 124 91.1
COL.COLO4_24488 Corchorus olitorius HOM05D006044 ORTHO05D007653 6.8e-58 227.3 123 89.4
MELO3C014555.2 Cucumis melo HOM05D006044 ORTHO05D007653 6.8e-58 227.3 124 91.1
Hma1.2p1_0214F.1_g090800 Hydrangea macrophylla HOM05D006044 ORTHO05D007653 6.8e-58 227.3 124 91.9
A10p25610 Brassica napus HOM05D006044 ORTHO05D007653 8.9e-58 226.9 123 89.4
BraA10t44628Z Brassica rapa HOM05D006044 ORTHO05D007653 8.9e-58 226.9 123 89.4
CDE09G0744 Ceratophyllum demersum HOM05D006044 ORTHO05D007653 8.9e-58 226.9 123 90.2
Potri.009G067500 Populus trichocarpa HOM05D006044 ORTHO05D007653 8.9e-58 226.9 121 91.7
TWI75G0655 Tripterygium wilfordii HOM05D006044 ORTHO05D007653 8.9e-58 226.9 123 91.1
Sp6g31450 Schrenkiella parvula HOM05D006044 ORTHO05D007653 1.2e-57 226.5 123 90.2
Thhalv10015024m.g Eutrema salsugineum HOM05D006044 ORTHO05D007653 1.5e-57 226.1 123 89.4
SalBow1G1993 Salvia bowleyana HOM05D006044 ORTHO05D000010 1.5e-57 226.1 120 94.2
CiPaw.14G111700 Carya illinoinensis HOM05D006044 ORTHO05D007653 2.0e-57 225.7 120 91.7
Hma1.2p1_1357F.1_g277915 Hydrangea macrophylla HOM05D006044 ORTHO05D007653 2.0e-57 225.7 120 92.5
Prupe.1G400800 Prunus persica HOM05D006044 ORTHO05D007653 2.0e-57 225.7 123 89.4
SalBow8G2527 Salvia bowleyana HOM05D006044 ORTHO05D007653 2.0e-57 225.7 121 93.4
SEGI_07566 Sequoiadendron giganteum HOM05D006044 ORTHO05D007653 2.0e-57 225.7 123 90.2
BcaB01g05427 Brassica carinata HOM05D006044 ORTHO05D007653 2.6e-57 225.3 123 89.4
Carub.0006s1069 Capsella rubella HOM05D006044 ORTHO05D007653 2.6e-57 225.3 123 90.2
Ciclev10017186m.g Citrus clementina HOM05D006044 ORTHO05D007653 2.6e-57 225.3 123 89.4
Migut.N02377 Erythranthe guttata HOM05D006044 ORTHO05D007653 2.6e-57 225.3 119 91.6
MD08G1047500 Malus domestica HOM05D006044 ORTHO05D007653 2.6e-57 225.3 123 89.4
Sabra09G0050500 Salix brachista HOM05D006044 ORTHO05D007653 2.6e-57 225.3 121 88.4
AL6G22970 Arabidopsis lyrata HOM05D006044 ORTHO05D007653 3.4e-57 224.9 123 89.4
AT5G12190 Arabidopsis thaliana HOM05D006044 ORTHO05D007653 3.4e-57 224.9 123 89.4
Ah.05g173120 Amaranthus hybridus HOM05D006044 ORTHO05D007653 4.4e-57 224.6 121 90.9
Cfa009890 Carpinus fangiana HOM05D006044 ORTHO05D007653 4.4e-57 224.6 120 90.8
Haze_23252 Corylus avellana HOM05D006044 ORTHO05D007653 4.4e-57 224.6 120 90.8
SGA_v2.0_scaffold310G48206 Striga asiatica HOM05D006044 ORTHO05D007653 5.7e-57 224.2 119 91.6
SGA_v2.0_scaffold3G01443 Striga asiatica HOM05D006044 ORTHO05D007653 5.7e-57 224.2 119 91.6
EL10Ac1g00766 Beta vulgaris HOM05D006044 ORTHO05D007653 9.8e-57 223.4 121 90.9
EL10Ac5g12840 Beta vulgaris HOM05D006044 ORTHO05D007653 9.8e-57 223.4 121 90.9
AagrBONN_evm.TU.Sc2ySwM_117.1592 Anthoceros agrestis HOM05D006044 ORTHO05D007653 2.2e-56 222.2 123 87.8
unitig_699.g19149 Utricularia gibba HOM05D006044 ORTHO05D007653 2.9e-56 221.9 119 93.3
AUR62013740 Chenopodium quinoa HOM05D006044 ORTHO05D007653 3.7e-56 221.5 121 90.1
AUR62023411 Chenopodium quinoa HOM05D006044 ORTHO05D007653 3.7e-56 221.5 121 90.1
Dinv09443 Davidia involucrata HOM05D006044 ORTHO05D007653 3.7e-56 221.5 116 94.8
MBI19_g20794_MAGBIO Magnolia biondii HOM05D006044 ORTHO05D007653 3.7e-56 221.5 120 90.0
Mapoly0207s0011 Marchantia polymorpha HOM05D006044 ORTHO05D007653 6.4e-56 220.7 122 87.7
Aqoxy2G00401 Aquilegia oxysepala HOM05D006044 ORTHO05D007653 8.3e-56 220.3 120 90.0
Pp3c1_15740 Physcomitrium patens HOM05D006044 ORTHO05D007653 8.3e-56 220.3 119 89.9
CDE08G0916 Ceratophyllum demersum HOM05D006044 ORTHO05D007653 1.1e-55 219.9 123 89.4
Dinv37467 Davidia involucrata HOM05D006044 ORTHO05D007653 1.1e-55 219.9 116 94.0
Nn017s41474 Nelumbo nucifera HOM05D006044 ORTHO05D007653 7.0e-55 217.2 116 92.2
CBR_g501 Chara braunii HOM05D006044 ORTHO05D007653 4.6e-54 214.5 120 88.3
BcaNung07015 Brassica carinata HOM05D006044 ORTHO05D007653 7.8e-54 213.8 115 91.3
Ca_07394_v3 Cicer arietinum L. HOM05D006044 ORTHO05D007653 7.8e-54 213.8 123 86.2
HPP92_019149 Vanilla planifolia HOM05D006044 ORTHO05D007653 7.8e-54 213.8 119 86.6
Os03g0811700 Oryza sativa ssp. japonica HOM05D006044 ORTHO05D007653 3.9e-53 211.5 122 85.2
Zm00001eb062150 Zea mays HOM05D006044 ORTHO05D007653 8.6e-53 210.3 122 84.4
Zm00001eb212190 Zea mays HOM05D006044 ORTHO05D007653 1.1e-52 209.9 122 84.4
CARHR200930 Cardamine hirsuta HOM05D006044 ORTHO05D007653 6.2e-51 204.1 123 81.3
CSS0031497 Camellia sinensis var. sinensis HOM05D006044 ORTHO05D007653 5.8e-49 197.6 137 74.5
Aqoxy2G00402 Aquilegia oxysepala HOM05D006044 ORTHO05D007653 2.2e-48 195.7 123 75.6
AL3G46680 Arabidopsis lyrata HOM05D006044 ORTHO05D007653 1.9e-47 192.6 114 79.8
SMO143G0133 Selaginella moellendorffii HOM05D006044 ORTHO05D007653 7.8e-46 187.2 114 79.8
MD13G1049300 Malus domestica HOM05D006044 ORTHO05D007653 1.6e-43 179.5 104 83.7
Cre03.g158950 Chlamydomonas reinhardtii HOM05D006044 ORTHO05D007653 1.4e-42 176.4 119 72.3
Duzib170G0372 Durio zibethinus HOM05D006044 ORTHO05D007653 8.3e-40 167.2 85 94.1
MCO15G700 Micromonas commoda HOM05D006044 ORTHO05D007653 5.4e-39 164.5 93 83.9
EL10Ac9g21533 Beta vulgaris HOM05D006044 ORTHO05D007653 7.3e-36 154.1 89 86.5
PRCOL_00006242 Prasinoderma coloniale HOM05D006044 ORTHO05D007653 1.1e-31 140.2 109 59.6
Haze_26695 Corylus avellana HOM05D006044 ORTHO05D007653 2.5e-28 129.0 109 52.3
AT2G14870 Arabidopsis thaliana HOM05D006044 ORTHO05D007653 2.4e-23 112.5 70 72.9
SGA_v2.0_scaffold34G13906 Striga asiatica HOM05D006044 ORTHO05D007653 1.9e-20 102.8 96 56.2
SalBow1G3729 Salvia bowleyana HOM05D006044 ORTHO05D357234 1.9e-15 86.3 42 95.2
SGA_v2.0_scaffold5G02950 Striga asiatica HOM05D006044 ORTHO05D007653 4.2e-15 85.1 59 67.8
SGA_v2.0_scaffold198G41064 Striga asiatica HOM05D006044 ORTHO05D400222 4.9e-08 61.6 102 40.2
Pp3c14_2340 Physcomitrium patens HOM05D006044 ORTHO05D318821 1.4e-07 60.1 31 87.1
PGR102G3118 Punica granatum HOM05D002411 ORTHO05D002564 5.5e-07 58.2 84 39.3
unitig_699.g19203 Utricularia gibba HOM05D005326 ORTHO05D006734 5.5e-07 58.2 124 28.2
Gorai.003G183300 Gossypium raimondii HOM05D000142 ORTHO05D003173 1.6e-06 56.6 84 35.7
COL.COLO4_11167 Corchorus olitorius HOM05D002411 ORTHO05D002564 2.1e-06 56.2 86 34.9
Dinv40333 Davidia involucrata HOM05D001413 ORTHO05D001385 2.1e-06 56.2 81 35.8
Sed0014227 Sechium edule HOM05D000604 ORTHO05D004856 2.7e-06 55.8 112 34.8
Duzib150G0537 Durio zibethinus HOM05D002411 ORTHO05D002564 3.5e-06 55.5 75 36.0
Duzib168G0560 Durio zibethinus HOM05D002411 ORTHO05D002564 3.5e-06 55.5 75 36.0
Glyma.14G115100 Glycine max HOM05D005326 ORTHO05D006734 3.5e-06 55.5 99 31.3
Thecc.09G359100 Theobroma cacao HOM05D002411 ORTHO05D002564 3.5e-06 55.5 75 36.0
Potri.005G024600 Populus trichocarpa HOM05D001413 ORTHO05D001385 4.6e-06 55.1 64 45.3
SGA_v2.0_scaffold25G10780 Striga asiatica HOM05D000142 ORTHO05D001253 4.6e-06 55.1 78 35.9
Dinv30820 Davidia involucrata HOM05D001413 ORTHO05D001385 6.0e-06 54.7 86 36.0
Migut.N00441 Erythranthe guttata HOM05D005326 ORTHO05D006734 6.0e-06 54.7 99 34.3
Mapoly0042s0009 Marchantia polymorpha HOM05D000142 ORTHO05D001253 6.0e-06 54.7 96 33.3
QL11p020733 Quercus lobata HOM05D003264 ORTHO05D003276 6.0e-06 54.7 104 31.7
Sed0004939 Sechium edule HOM05D003264 ORTHO05D003276 6.0e-06 54.7 106 30.2
SMO276G0012 Selaginella moellendorffii HOM05D003264 ORTHO05D003276 6.0e-06 54.7 92 29.3
Migut.M00474 Erythranthe guttata HOM05D000604 ORTHO05D004856 7.9e-06 54.3 112 34.8
Migut.M00477 Erythranthe guttata HOM05D000604 ORTHO05D004856 7.9e-06 54.3 112 34.8
Migut.M00563 Erythranthe guttata HOM05D000604 ORTHO05D004856 7.9e-06 54.3 112 34.8
Gohir.A03G000053 Gossypium hirsutum HOM05D000142 ORTHO05D003173 7.9e-06 54.3 84 34.5


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