Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr13g0406711 Helianthus annuus HOM05D006139 ORTHO05D007681 2.8e-31 137.9 66 100.0
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 4.1e-22 107.5 57 86.0
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 7.0e-22 106.7 57 87.7
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 1.0e-20 102.8 53 88.7
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.0e-20 102.8 53 88.7
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 2.9e-20 101.3 57 78.9
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 3.8e-20 100.9 53 86.8
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 5.0e-20 100.5 53 88.7
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 5.0e-20 100.5 58 79.3
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 5.0e-20 100.5 53 86.8
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 5.0e-20 100.5 52 88.5
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 6.6e-20 100.1 57 80.7
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 8.6e-20 99.8 57 78.9
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 1.1e-19 99.4 57 78.9
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 1.5e-19 99.0 58 79.3
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 1.5e-19 99.0 57 75.4
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 1.5e-19 99.0 58 79.3
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 1.9e-19 98.6 57 77.2
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 1.9e-19 98.6 53 84.9
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 1.9e-19 98.6 57 75.4
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 2.5e-19 98.2 57 77.2
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 2.5e-19 98.2 58 77.6
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 3.3e-19 97.8 58 75.9
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 3.3e-19 97.8 57 77.2
DCAR_005496 Daucus carota HOM05D006139 ORTHO05D007681 4.2e-19 97.4 53 79.2
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 5.5e-19 97.1 57 78.9
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 7.2e-19 96.7 53 83.0
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 9.5e-19 96.3 57 73.7
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 1.2e-18 95.9 53 83.0
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 1.2e-18 95.9 58 77.6
PGSC0003DMG400014069 Solanum tuberosum HOM05D006139 ORTHO05D007681 1.2e-18 95.9 57 75.4
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 1.6e-18 95.5 57 73.7
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 1.6e-18 95.5 58 77.6
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 2.1e-18 95.1 65 70.8
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 2.1e-18 95.1 57 73.7
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 2.1e-18 95.1 53 81.1
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 2.1e-18 95.1 57 73.7
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 2.1e-18 95.1 57 75.4
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 2.8e-18 94.7 57 75.4
Ca_11424_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 2.8e-18 94.7 58 75.9
Atru.chr2.2053 Acer truncatum HOM05D006139 ORTHO05D007681 3.6e-18 94.4 57 71.9
TPR.G8879 Trifolium pratense HOM05D006139 ORTHO05D007681 3.6e-18 94.4 58 75.9
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 4.7e-18 94.0 57 71.9
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 4.7e-18 94.0 57 70.2
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 8.0e-18 93.2 57 71.9
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 1.0e-17 92.8 57 73.7
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 1.0e-17 92.8 57 70.2
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 2.3e-17 91.7 57 73.7
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 2.3e-17 91.7 57 73.7
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 4.0e-17 90.9 57 71.9
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 6.8e-17 90.1 57 68.4
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 6.8e-17 90.1 58 72.4
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 8.9e-17 89.7 57 68.4
TPR.G8907 Trifolium pratense HOM05D006139 ORTHO05D007681 8.9e-17 89.7 54 77.8
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.5e-16 89.0 53 71.7
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 1.5e-16 89.0 53 75.5
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 1.5e-16 89.0 58 72.4
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 2.6e-16 88.2 53 79.2
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 2.6e-16 88.2 53 73.6
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 4.4e-16 87.4 57 73.7
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 5.7e-16 87.0 53 77.4
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 1.3e-15 85.9 53 71.7
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 1.7e-15 85.5 51 72.5
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 2.2e-15 85.1 51 70.6
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 3.7e-15 84.3 57 64.9
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 4.9e-15 84.0 47 80.9
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 6.3e-15 83.6 57 66.7
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 6.3e-15 83.6 57 66.7
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 6.3e-15 83.6 57 63.2
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 6.3e-15 83.6 53 69.8
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 6.3e-15 83.6 57 66.7
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 8.3e-15 83.2 56 67.9
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 8.3e-15 83.2 57 64.9
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 1.1e-14 82.8 57 63.2
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 1.1e-14 82.8 50 76.0
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 1.1e-14 82.8 53 75.5
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 1.4e-14 82.4 55 67.3
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 1.8e-14 82.0 57 64.9
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 1.8e-14 82.0 57 63.2
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 5.4e-14 80.5 57 61.4
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 5.4e-14 80.5 57 61.4
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 7.0e-14 80.1 58 65.5
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 1.2e-13 79.3 91 47.3
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 5.9e-13 77.0 58 60.3
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 1.3e-12 75.9 57 57.9
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 3.6e-10 67.8 60 60.0
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 4.9e-07 57.4 57 54.4
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 1.9e-06 55.5 36 72.2


User provided reference genes

Program Settings