Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0282541 Helianthus annuus HOM05D000216 ORTHO05D000634 3.5e-31 137.5 63 100.0
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 7.9e-23 109.8 49 100.0
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 7.9e-23 109.8 49 100.0
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 7.9e-23 109.8 49 100.0
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 7.9e-23 109.8 49 100.0
HanXRQChr14g0436631 Helianthus annuus HOM05D000216 ORTHO05D000634 7.9e-23 109.8 49 100.0
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 7.9e-23 109.8 49 100.0
Lsat_1_v5_gn_9_5941 Lactuca sativa HOM05D000216 ORTHO05D000634 7.9e-23 109.8 49 100.0
HanXRQChr03g0073121 Helianthus annuus HOM05D000216 ORTHO05D000634 6.7e-22 106.7 49 98.0
Hma1.2p1_0094F.1_g047104 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 1.6e-20 102.1 49 95.9
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 6.3e-20 100.1 49 91.8
Lj2A1237T129 Lonicera japonica HOM05D000216 ORTHO05D000634 1.1e-19 99.4 49 91.8
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 1.1e-19 99.4 49 91.8
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 1.1e-19 99.4 49 91.8
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 1.4e-19 99.0 49 91.8
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.4e-19 99.0 49 91.8
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.4e-19 99.0 49 91.8
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.4e-19 99.0 49 91.8
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.4e-19 99.0 49 91.8
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.4e-19 99.0 49 91.8
Solyc12g096910.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.4e-19 99.0 49 91.8
PGSC0003DMG400020296 Solanum tuberosum HOM05D000216 ORTHO05D000634 1.4e-19 99.0 49 91.8
AUR62030122 Chenopodium quinoa HOM05D000216 ORTHO05D000634 1.8e-19 98.6 51 86.3
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 1.8e-19 98.6 49 91.8
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 2.4e-19 98.2 49 89.8
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 2.4e-19 98.2 49 89.8
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 4.1e-19 97.4 49 89.8
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 5.3e-19 97.1 49 85.7
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 5.3e-19 97.1 49 89.8
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 9.0e-19 96.3 49 91.8
AUR62024082 Chenopodium quinoa HOM05D000216 ORTHO05D000634 1.2e-18 95.9 49 87.8
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.2e-18 95.9 49 89.8
Gohir.D13G143950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.2e-18 95.9 49 87.8
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 1.5e-18 95.5 49 87.8
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.5e-18 95.5 49 87.8
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.5e-18 95.5 49 87.8
CAN.G386.8 Capsicum annuum HOM05D000216 ORTHO05D001131 1.5e-18 95.5 49 89.8
Psat4g147920 Pisum sativum HOM05D000216 ORTHO05D000634 2.0e-18 95.1 49 85.7
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 2.6e-18 94.7 49 89.8
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 2.6e-18 94.7 49 89.8
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 2.6e-18 94.7 49 89.8
CAN.G939.14 Capsicum annuum HOM05D000216 ORTHO05D000634 3.4e-18 94.4 49 87.8
Eucgr.J01352 Eucalyptus grandis HOM05D000216 ORTHO05D000634 4.5e-18 94.0 49 85.7
Solyc10g011720.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.5e-18 94.0 49 87.8
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 5.9e-18 93.6 49 85.7
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 1.0e-17 92.8 49 87.8
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 1.0e-17 92.8 49 87.8
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 1.0e-17 92.8 49 87.8
BolSC44t60847H Brassica oleracea HOM05D000216 ORTHO05D000634 1.0e-17 92.8 49 87.8
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 1.0e-17 92.8 49 87.8
BraSC151t45695Z Brassica rapa HOM05D000216 ORTHO05D000634 1.0e-17 92.8 49 87.8
Nitab4.5_0005637g0010 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.0e-17 92.8 49 87.8
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 1.7e-17 92.0 49 85.7
CARHR281920 Cardamine hirsuta HOM05D000216 ORTHO05D000634 1.7e-17 92.0 49 85.7
Nitab4.5_0002868g0030 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.7e-17 92.0 49 87.8
Oeu012803.1 Olea europaea HOM05D000216 ORTHO05D000634 1.7e-17 92.0 49 83.7
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.7e-17 92.0 49 85.7
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.7e-17 92.0 49 85.7
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.7e-17 92.0 49 85.7
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.7e-17 92.0 49 85.7
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.7e-17 92.0 49 85.7
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.7e-17 92.0 49 85.7
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.7e-17 92.0 49 85.7
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.7e-17 92.0 49 85.7
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.7e-17 92.0 49 85.7
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.7e-17 92.0 49 85.7
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.7e-17 92.0 49 85.7
Gorai.004G245000 Gossypium raimondii HOM05D000216 ORTHO05D000634 2.9e-17 91.3 49 85.7
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 3.8e-17 90.9 45 93.3
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 6.5e-17 90.1 49 81.6
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 1.1e-16 89.4 49 81.6
arahy.Tifrunner.gnm1.ann1.ZJYB0J Arachis hypogaea HOM05D000216 ORTHO05D000473 1.1e-16 89.4 49 81.6
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 1.1e-16 89.4 49 81.6
Lalb_Chr04g0260931 Lupinus albus HOM05D000216 ORTHO05D002552 2.5e-16 88.2 50 84.0
Lalb_Chr09g0335371 Lupinus albus HOM05D000216 ORTHO05D000634 2.5e-16 88.2 50 84.0
Lalb_Chr22g0361661 Lupinus albus HOM05D000216 ORTHO05D000634 2.5e-16 88.2 50 84.0
Nitab4.5_0000172g0280 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.5e-16 88.2 49 83.7
BraSC140t45588Z Brassica rapa HOM05D000216 ORTHO05D000634 3.2e-16 87.8 46 87.0
Oeu062867.1 Olea europaea HOM05D000216 ORTHO05D000634 3.2e-16 87.8 49 83.7
Solyc01g017510.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.2e-16 87.8 49 83.7
Migut.D01415 Erythranthe guttata HOM05D000216 ORTHO05D000634 5.5e-16 87.0 45 88.9
CAN.G844.3 Capsicum annuum HOM05D000216 ORTHO05D000634 7.2e-16 86.7 49 79.6
Nitab4.5_0001761g0170 Nicotiana tabacum HOM05D000216 ORTHO05D000634 7.2e-16 86.7 45 88.9
Solyc03g095380.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 7.2e-16 86.7 49 79.6
Hund28153 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.2e-15 85.9 46 82.6
Hund28617 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.2e-15 85.9 43 88.4
Hund10654 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.6e-15 84.3 49 81.6
Thhalv10023328m.g Eutrema salsugineum HOM05D000216 ORTHO05D000634 7.9e-15 83.2 49 77.6
SGA_v2.0_scaffold119G32687 Striga asiatica HOM05D000216 ORTHO05D000634 7.9e-15 83.2 51 78.4
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 1.0e-14 82.8 49 73.5
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 3.0e-14 81.3 49 73.5
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 3.3e-13 77.8 49 69.4
Hund03955 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.9e-11 70.1 49 69.4
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 9.1e-11 69.7 33 90.9
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 3.4e-10 67.8 49 69.4
arahy.Tifrunner.gnm1.ann1.09TZAG Arachis hypogaea HOM05D000216 ORTHO05D000634 1.7e-09 65.5 37 73.0
Nitab4.5_0001783g0070 Nicotiana tabacum HOM05D000216 ORTHO05D002807 2.5e-08 61.6 32 81.2
Migut.M00502 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.6e-07 58.9 40 75.0
TPR.G7577 Trifolium pratense HOM05D000216 ORTHO05D000634 2.1e-07 58.5 45 60.0
arahy.Tifrunner.gnm1.ann1.KRC0HM Arachis hypogaea HOM05D000216 ORTHO05D000634 2.7e-07 58.2 32 75.0
HanXRQChr00c0300g0573171 Helianthus annuus HOM05D000216 ORTHO05D000634 4.6e-07 57.4 26 100.0
SMO086G0013 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 7.9e-07 56.6 48 52.1
EL10Ac5g12008 Beta vulgaris HOM05D000216 ORTHO05D000634 1.0e-06 56.2 34 73.5
Solyc01g017420.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.4e-06 55.8 49 59.2
EL10Ac5g11996 Beta vulgaris HOM05D000216 ORTHO05D000634 5.1e-06 53.9 34 70.6


User provided reference genes

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