Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_027471 Vanilla planifolia HOM05D005462 ORTHO05D006718 1.4e-60 236.1 117 100.0
ATR0772G220 Amborella trichopoda HOM05D005462 ORTHO05D006718 1.2e-32 143.3 82 76.8
MBI01_g28354_MAGBIO Magnolia biondii HOM05D005462 ORTHO05D006718 1.7e-31 139.4 105 65.7
Oeu033986.1 Olea europaea HOM05D005462 ORTHO05D006718 5.0e-31 137.9 76 77.6
TAR636G3557 Trochodendron aralioides HOM05D005462 ORTHO05D006718 8.6e-31 137.1 93 65.6
Aqoxy4G02697 Aquilegia oxysepala HOM05D005462 ORTHO05D006718 1.9e-30 136.0 84 69.0
SEGI_04507 Sequoiadendron giganteum HOM05D005462 ORTHO05D006718 2.5e-30 135.6 92 67.4
Nn2g14251 Nelumbo nucifera HOM05D005462 ORTHO05D006718 7.3e-30 134.0 96 63.5
PSO384G2581 Papaver somniferum HOM05D005462 ORTHO05D006718 9.5e-30 133.7 103 56.3
MSTRG.27558 Avicennia marina HOM05D005462 ORTHO05D006718 2.1e-29 132.5 76 72.4
PSO339G2458 Papaver somniferum HOM05D005462 ORTHO05D006718 2.8e-29 132.1 103 57.3
Dinv08599 Davidia involucrata HOM05D005462 ORTHO05D006718 8.0e-29 130.6 104 58.7
Hma1.2p1_0834F.1_g225780 Hydrangea macrophylla HOM05D005462 ORTHO05D006718 2.3e-28 129.0 77 71.4
Hund06792 Selenicereus undatus HOM05D005462 ORTHO05D006718 2.3e-28 129.0 76 69.7
Sc09g0005160 Simmondsia chinensis HOM05D005462 ORTHO05D006718 3.0e-28 128.6 78 69.2
EL10Ac3g07311 Beta vulgaris HOM05D005462 ORTHO05D006718 4.0e-28 128.3 76 71.1
EL10Ac3g07337 Beta vulgaris HOM05D005462 ORTHO05D006718 4.0e-28 128.3 76 71.1
SalBow3G0159 Salvia bowleyana HOM05D005462 ORTHO05D006718 5.2e-28 127.9 76 72.4
AUR62021021 Chenopodium quinoa HOM05D005462 ORTHO05D006718 6.8e-28 127.5 76 71.1
EL10Ac3g07314 Beta vulgaris HOM05D005462 ORTHO05D006718 1.2e-27 126.7 76 69.7
SGA_v2.0_scaffold329G48874 Striga asiatica HOM05D005462 ORTHO05D006718 1.2e-27 126.7 76 71.1
HanXRQChr11g0321421 Helianthus annuus HOM05D005462 ORTHO05D006718 1.5e-27 126.3 102 61.8
Cpa.g.sc54.12 Carica papaya HOM05D005462 ORTHO05D006718 2.6e-27 125.6 74 71.6
AUR62018420 Chenopodium quinoa HOM05D005462 ORTHO05D006718 2.6e-27 125.6 76 69.7
ECA232G2701 Erigeron canadensis HOM05D005462 ORTHO05D006718 2.6e-27 125.6 96 59.4
Solyc11g006680.3 Solanum lycopersicum HOM05D005462 ORTHO05D006718 3.4e-27 125.2 78 64.1
Sopen11g002610 Solanum pennellii HOM05D005462 ORTHO05D006718 3.4e-27 125.2 78 64.1
PGSC0003DMG401007600 Solanum tuberosum HOM05D005462 ORTHO05D006718 3.4e-27 125.2 78 64.1
Migut.F00860 Erythranthe guttata HOM05D005462 ORTHO05D006718 5.8e-27 124.4 75 70.7
CSS0018603 Camellia sinensis var. sinensis HOM05D005462 ORTHO05D006718 1.7e-26 122.9 76 65.8
Actinidia03844 Actinidia chinensis HOM05D005462 ORTHO05D006718 2.2e-26 122.5 76 65.8
Manes.07G085300 Manihot esculenta HOM05D005462 ORTHO05D006718 2.2e-26 122.5 76 65.8
Peaxi162Scf00125g00414 Petunia axillaris HOM05D005462 ORTHO05D006718 2.9e-26 122.1 98 51.0
RcHm_v2.0_Chr1g0336351 Rosa chinensis HOM05D005462 ORTHO05D006718 2.9e-26 122.1 76 64.5
TWI15G0792 Tripterygium wilfordii HOM05D005462 ORTHO05D006718 2.9e-26 122.1 76 67.1
TPR.G19815 Trifolium pratense HOM05D005462 ORTHO05D006718 3.7e-26 121.7 82 63.4
Zm00001eb434090 Zea mays HOM05D005462 ORTHO05D006718 3.7e-26 121.7 75 70.7
COL.COLO4_07193 Corchorus olitorius HOM05D005462 ORTHO05D006718 8.3e-26 120.6 100 57.0
Potri.008G017400 Populus trichocarpa HOM05D005462 ORTHO05D006718 8.3e-26 120.6 76 65.8
Atru.chr12.1058 Acer truncatum HOM05D005462 ORTHO05D006718 1.4e-25 119.8 76 65.8
Eucgr.G02683 Eucalyptus grandis HOM05D005462 ORTHO05D006718 1.4e-25 119.8 98 55.1
CsaV3_5G035270 Cucumis sativus L. HOM05D005462 ORTHO05D006718 1.9e-25 119.4 75 68.0
FvH4_7g06690 Fragaria vesca HOM05D005462 ORTHO05D006718 1.9e-25 119.4 76 63.2
FAN03G2522 Fragaria x ananassa HOM05D005462 ORTHO05D006718 1.9e-25 119.4 76 63.2
FAN06G4410 Fragaria x ananassa HOM05D005462 ORTHO05D006718 1.9e-25 119.4 76 63.2
Os04g0684500 Oryza sativa ssp. japonica HOM05D005462 ORTHO05D006718 1.9e-25 119.4 75 68.0
Medtr1g048080 Medicago truncatula HOM05D005462 ORTHO05D006718 2.4e-25 119.0 77 63.6
Prupe.2G071400 Prunus persica HOM05D005462 ORTHO05D006718 2.4e-25 119.0 75 64.0
Nitab4.5_0003787g0050 Nicotiana tabacum HOM05D005462 ORTHO05D006718 3.2e-25 118.6 80 63.8
Ca_13242_v3 Cicer arietinum L. HOM05D005462 ORTHO05D006718 4.1e-25 118.2 100 54.0
Ca_30156_v3 Cicer arietinum L. HOM05D005462 ORTHO05D006718 4.1e-25 118.2 100 54.0
FAN10G0457 Fragaria x ananassa HOM05D005462 ORTHO05D006718 4.1e-25 118.2 76 63.2
Ah.04g150500 Amaranthus hybridus HOM05D005462 ORTHO05D006718 5.4e-25 117.9 76 65.8
CANSAT56G2776 Cannabis sativa HOM05D005462 ORTHO05D006718 5.4e-25 117.9 76 64.5
DCAR_028403 Daucus carota HOM05D005462 ORTHO05D006718 5.4e-25 117.9 80 60.0
Gohir.D13G010200 Gossypium hirsutum HOM05D005462 ORTHO05D006718 5.4e-25 117.9 86 58.1
Gorai.013G010900 Gossypium raimondii HOM05D005462 ORTHO05D006718 5.4e-25 117.9 86 58.1
ClCG05G021870 Citrullus lanatus HOM05D005462 ORTHO05D006718 7.0e-25 117.5 106 53.8
HPP92_013816 Vanilla planifolia HOM05D005462 ORTHO05D006718 7.0e-25 117.5 59 88.1
Aa31LG11G5620 Aethionema arabicum HOM05D005462 ORTHO05D000003 9.2e-25 117.1 102 52.0
PGR142G1862 Punica granatum HOM05D005462 ORTHO05D006718 9.2e-25 117.1 90 56.7
Ciclev10014488m.g Citrus clementina HOM05D005462 ORTHO05D006718 1.2e-24 116.7 95 55.8
THA.LOC104823152 Tarenaya hassleriana HOM05D005462 ORTHO05D006718 1.2e-24 116.7 76 61.8
CiPaw.13G042600 Carya illinoinensis HOM05D005462 ORTHO05D006718 1.6e-24 116.3 78 64.1
Sabra08G0010900 Salix brachista HOM05D005462 ORTHO05D006718 1.6e-24 116.3 76 63.2
Lj6g0019256 Lotus japonicus HOM05D005462 ORTHO05D006718 2.7e-24 115.5 77 59.7
Sed0013359 Sechium edule HOM05D005462 ORTHO05D006718 3.5e-24 115.2 73 67.1
Haze_03474 Corylus avellana HOM05D005462 ORTHO05D006718 6.0e-24 114.4 76 65.8
MD07G1061700 Malus domestica HOM05D005462 ORTHO05D006718 6.0e-24 114.4 76 60.5
Gohir.A13G009500 Gossypium hirsutum HOM05D005462 ORTHO05D006718 7.8e-24 114.0 85 57.6
PGSC0003DMG400016997 Solanum tuberosum HOM05D005462 ORTHO05D006718 1.0e-23 113.6 74 66.2
MELO3C012341.2 Cucumis melo HOM05D005462 ORTHO05D006718 1.3e-23 113.2 81 61.7
Lsat_1_v5_gn_9_47180 Lactuca sativa HOM05D005462 ORTHO05D006718 1.3e-23 113.2 76 61.8
Thecc.10G115600 Theobroma cacao HOM05D005462 ORTHO05D006718 1.3e-23 113.2 86 58.1
Cfa010538 Carpinus fangiana HOM05D005462 ORTHO05D006718 1.7e-23 112.8 76 64.5
Glyma.20G074200 Glycine max HOM05D005462 ORTHO05D006718 1.7e-23 112.8 86 58.1
CAN.G186.57 Capsicum annuum HOM05D005462 ORTHO05D006718 2.3e-23 112.5 73 64.4
Duzib128G2019 Durio zibethinus HOM05D005462 ORTHO05D006718 2.3e-23 112.5 98 54.1
Solyc04g009720.1 Solanum lycopersicum HOM05D005462 ORTHO05D006718 3.0e-23 112.1 74 64.9
VMungo0720G0270 Vigna mungo HOM05D005462 ORTHO05D006718 3.9e-23 111.7 78 60.3
Sopen04g004840 Solanum pennellii HOM05D005462 ORTHO05D006718 1.5e-22 109.8 74 63.5
AL6G14460 Arabidopsis lyrata HOM05D005462 ORTHO05D006718 5.6e-22 107.8 76 60.5
arahy.Tifrunner.gnm1.ann1.D9T4RB Arachis hypogaea HOM05D005462 ORTHO05D006718 5.6e-22 107.8 86 59.3
arahy.Tifrunner.gnm1.ann1.LTKS6Y Arachis hypogaea HOM05D005462 ORTHO05D006718 5.6e-22 107.8 86 59.3
Carub.0006s0369 Capsella rubella HOM05D005462 ORTHO05D006718 5.6e-22 107.8 76 60.5
Potri.010G241300 Populus trichocarpa HOM05D005462 ORTHO05D006718 5.6e-22 107.8 76 56.6
Thhalv10012596m.g Eutrema salsugineum HOM05D005462 ORTHO05D006718 7.3e-22 107.5 76 60.5
Lalb_Chr01g0010721 Lupinus albus HOM05D005462 ORTHO05D006718 7.3e-22 107.5 76 61.8
Phvul.007G234900 Phaseolus vulgaris HOM05D005462 ORTHO05D006718 7.3e-22 107.5 80 57.5
Sp6g38020 Schrenkiella parvula HOM05D005462 ORTHO05D006718 9.5e-22 107.1 76 60.5
C09p72080 Brassica napus HOM05D005462 ORTHO05D006718 1.6e-21 106.3 78 57.7
AT5G04810 Arabidopsis thaliana HOM05D005462 ORTHO05D006718 2.1e-21 105.9 74 62.2
A10p31410 Brassica napus HOM05D005462 ORTHO05D006718 2.8e-21 105.5 78 57.7
QL04p046981 Quercus lobata HOM05D005462 ORTHO05D006718 2.8e-21 105.5 89 55.1
BraA10t45187Z Brassica rapa HOM05D005462 ORTHO05D006718 6.2e-21 104.4 78 56.4
BcaC06g32185 Brassica carinata HOM05D005462 ORTHO05D006718 1.4e-20 103.2 75 58.7
BolC9t59953H Brassica oleracea HOM05D005462 ORTHO05D006718 1.8e-20 102.8 76 56.6
Peaxi162Scf00195g01111 Petunia axillaris HOM05D005462 ORTHO05D006718 1.5e-19 99.8 70 62.9
Pp3c5_10110 Physcomitrium patens HOM05D005462 ORTHO05D006718 3.7e-18 95.1 84 53.6
Mapoly0061s0009 Marchantia polymorpha HOM05D005462 ORTHO05D006718 1.9e-17 92.8 77 49.4
Pp3c16_280 Physcomitrium patens HOM05D005462 ORTHO05D006718 1.6e-16 89.7 119 38.7
AagrBONN_evm.TU.Sc2ySwM_362.2024 Anthoceros agrestis HOM05D005462 ORTHO05D006718 3.5e-16 88.6 72 54.2
GSVIVG01034651001 Vitis vinifera HOM05D005462 ORTHO05D006718 6.0e-16 87.8 52 65.4
SMO165G0125 Selaginella moellendorffii HOM05D005462 ORTHO05D006718 3.9e-15 85.1 70 50.0
SMO272G0004 Selaginella moellendorffii HOM05D005462 ORTHO05D006718 1.1e-14 83.6 70 50.0
CBR_g70711 Chara braunii HOM05D005462 ORTHO05D006718 1.6e-13 79.7 73 49.3
CBR_g46449 Chara braunii HOM05D002004 ORTHO05D002089 1.2e-11 73.6 72 44.4
Oeu033283.1 Olea europaea HOM05D005462 ORTHO05D006718 7.3e-06 54.3 118 29.7


User provided reference genes

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