Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_019772 Vanilla planifolia HOM05D005149 ORTHO05D006251 7.8e-250 866.7 443 100.0
TAR633G2177 Trochodendron aralioides HOM05D005149 ORTHO05D006251 1.4e-166 590.1 436 69.5
Aqoxy1G01331 Aquilegia oxysepala HOM05D005149 ORTHO05D006251 1.2e-165 587.0 441 66.9
MBI19_g30303_MAGBIO Magnolia biondii HOM05D005149 ORTHO05D006251 1.1e-160 570.5 441 67.1
CSS0030945 Camellia sinensis var. sinensis HOM05D005149 ORTHO05D006251 6.3e-159 564.7 445 67.4
PSO339G6394 Papaver somniferum HOM05D005149 ORTHO05D006251 8.2e-159 564.3 449 65.9
RcHm_v2.0_Chr1g0331361 Rosa chinensis HOM05D005149 ORTHO05D006251 1.8e-158 563.1 442 64.9
Actinidia17467 Actinidia chinensis HOM05D005149 ORTHO05D006251 1.0e-156 557.4 445 66.5
CANSAT56G0938 Cannabis sativa HOM05D005149 ORTHO05D006251 1.3e-156 557.0 447 64.7
MD02G1263600 Malus domestica HOM05D005149 ORTHO05D006251 1.7e-156 556.6 448 65.6
FAN17G1198 Fragaria x ananassa HOM05D005149 ORTHO05D006251 1.5e-155 553.5 442 64.3
ECA246G4563 Erigeron canadensis HOM05D005149 ORTHO05D006251 7.2e-155 551.2 443 64.1
Hma1.2p1_0327F.1_g126330 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 7.2e-155 551.2 418 69.4
FAN12G0991 Fragaria x ananassa HOM05D005149 ORTHO05D006251 1.2e-154 550.4 442 64.0
FvH4_7g05040 Fragaria vesca HOM05D005149 ORTHO05D006251 3.6e-154 548.9 441 63.0
HanXRQChr06g0174201 Helianthus annuus HOM05D005149 ORTHO05D006251 6.1e-154 548.1 447 63.8
MD07G1054600 Malus domestica HOM05D005149 ORTHO05D006251 2.3e-153 546.2 423 66.9
FAN03G2277 Fragaria x ananassa HOM05D005149 ORTHO05D006251 7.5e-152 541.2 441 62.8
Sc09g0004900 Simmondsia chinensis HOM05D005149 ORTHO05D006251 1.3e-151 540.4 439 62.9
Hund06827 Selenicereus undatus HOM05D005149 ORTHO05D006251 2.8e-151 539.3 442 62.7
Thecc.10G129400 Theobroma cacao HOM05D005149 ORTHO05D006251 4.8e-151 538.5 455 62.4
Migut.N01878 Erythranthe guttata HOM05D005149 ORTHO05D006251 1.4e-150 537.0 439 63.6
Gohir.A11G310500 Gossypium hirsutum HOM05D005149 ORTHO05D006251 1.4e-150 537.0 447 62.6
Gohir.A09G246100 Gossypium hirsutum HOM05D005149 ORTHO05D006251 7.0e-150 534.6 447 62.2
Gohir.D13G181800 Gossypium hirsutum HOM05D005149 ORTHO05D006251 9.1e-150 534.3 447 62.4
Psat0s3059g0040 Pisum sativum HOM05D005149 ORTHO05D006251 9.1e-150 534.3 443 63.2
Haze_03404 Corylus avellana HOM05D005149 ORTHO05D006251 1.6e-149 533.5 441 63.7
FvH4_4g11870 Fragaria vesca HOM05D005149 ORTHO05D006251 4.5e-149 531.9 442 62.9
FAN07G2641 Fragaria x ananassa HOM05D005149 ORTHO05D006251 5.9e-149 531.6 442 62.9
Gorai.013G207400 Gossypium raimondii HOM05D005149 ORTHO05D006251 5.9e-149 531.6 447 62.0
CiPaw.13G047200 Carya illinoinensis HOM05D005149 ORTHO05D006251 7.7e-149 531.2 453 61.4
Lj3g0016494 Lotus japonicus HOM05D005149 ORTHO05D006251 1.0e-148 530.8 443 62.3
MSTRG.5085 Avicennia marina HOM05D005149 ORTHO05D006251 6.5e-148 528.1 443 62.1
CsaV3_6G035780 Cucumis sativus L. HOM05D005149 ORTHO05D006251 6.5e-148 528.1 443 62.5
Phvul.011G187600 Phaseolus vulgaris HOM05D005149 ORTHO05D006251 6.5e-148 528.1 445 62.5
Glyma.08G228000 Glycine max HOM05D005149 ORTHO05D006251 1.1e-147 527.3 445 62.9
Lalb_Chr03g0032361 Lupinus albus HOM05D005149 ORTHO05D006251 3.2e-147 525.8 437 64.3
MELO3C011385.2 Cucumis melo HOM05D005149 ORTHO05D006251 4.2e-147 525.4 431 63.6
Lj7C543G12 Lonicera japonica HOM05D005149 ORTHO05D006251 7.2e-147 524.6 500 58.0
PGSC0003DMG400027500 Solanum tuberosum HOM05D005149 ORTHO05D006251 7.2e-147 524.6 445 61.1
EL10Ac4g08774 Beta vulgaris HOM05D005149 ORTHO05D006251 1.2e-146 523.9 438 62.3
Os01g0813500 Oryza sativa ssp. japonica HOM05D005149 ORTHO05D006251 1.6e-146 523.5 457 59.5
Gorai.006G271200 Gossypium raimondii HOM05D005149 ORTHO05D006251 2.1e-146 523.1 449 61.5
Gohir.D09G246700 Gossypium hirsutum HOM05D005149 ORTHO05D006251 6.1e-146 521.5 449 61.0
arahy.Tifrunner.gnm1.ann1.PFS9H6 Arachis hypogaea HOM05D005149 ORTHO05D006251 1.0e-145 520.8 465 60.2
arahy.Tifrunner.gnm1.ann1.Q8TWNW Arachis hypogaea HOM05D005149 ORTHO05D006251 1.0e-145 520.8 465 60.2
Medtr8g044150 Medicago truncatula HOM05D005149 ORTHO05D006251 1.4e-145 520.4 445 61.8
Ca_12171_v3 Cicer arietinum L. HOM05D005149 ORTHO05D006251 1.8e-145 520.0 439 62.0
Manes.07G084100 Manihot esculenta HOM05D005149 ORTHO05D006251 1.8e-145 520.0 449 60.6
Ah.04g162660 Amaranthus hybridus HOM05D005149 ORTHO05D006251 2.3e-145 519.6 443 61.9
Solyc01g096910.3 Solanum lycopersicum HOM05D005149 ORTHO05D006251 3.0e-145 519.2 443 61.4
FAN12G2325 Fragaria x ananassa HOM05D005149 ORTHO05D006251 6.8e-145 518.1 457 60.2
PGR142G4466 Punica granatum HOM05D005149 ORTHO05D006251 8.8e-145 517.7 452 61.3
Sed0022214 Sechium edule HOM05D005149 ORTHO05D006251 8.8e-145 517.7 436 62.4
Sopen01g040620 Solanum pennellii HOM05D005149 ORTHO05D006251 8.8e-145 517.7 443 61.2
TWI38G0882 Tripterygium wilfordii HOM05D005149 ORTHO05D006251 1.5e-144 516.9 434 62.9
Cfa010450 Carpinus fangiana HOM05D005149 ORTHO05D006251 1.7e-143 513.5 448 61.6
Lalb_Chr19g0132531 Lupinus albus HOM05D005149 ORTHO05D006251 2.2e-143 513.1 434 63.6
vmacro20844 Vaccinium macrocarpon HOM05D005149 ORTHO05D006251 2.8e-143 512.7 438 63.7
Zm00001eb149970 Zea mays HOM05D005149 ORTHO05D006251 8.3e-143 511.1 450 61.3
Potri.010G246400 Populus trichocarpa HOM05D005149 ORTHO05D006251 1.4e-142 510.4 455 60.7
Ciclev10015236m.g Citrus clementina HOM05D005149 ORTHO05D006251 5.4e-142 508.4 448 60.3
DCAR_023093 Daucus carota HOM05D005149 ORTHO05D006251 5.4e-142 508.4 398 66.8
Atru.chr12.1229 Acer truncatum HOM05D005149 ORTHO05D006251 9.1e-142 507.7 437 61.3
Oeu058668.1 Olea europaea HOM05D005149 ORTHO05D006251 1.6e-141 506.9 422 63.0
CDE04G0393 Ceratophyllum demersum HOM05D005149 ORTHO05D006251 6.6e-140 501.5 434 59.9
AT5G04920 Arabidopsis thaliana HOM05D005149 ORTHO05D006251 9.5e-139 497.7 446 60.1
QL04p050393 Quercus lobata HOM05D005149 ORTHO05D006251 2.8e-138 496.1 455 58.7
AL6G14620 Arabidopsis lyrata HOM05D005149 ORTHO05D006251 1.4e-137 493.8 437 60.4
Carub.0006s0386 Capsella rubella HOM05D005149 ORTHO05D006251 5.2e-137 491.9 444 59.9
AUR62014307 Chenopodium quinoa HOM05D005149 ORTHO05D006251 5.2e-137 491.9 452 59.1
Sp6g37880 Schrenkiella parvula HOM05D005149 ORTHO05D006251 8.9e-137 491.1 438 60.0
THA.LOC104816483 Tarenaya hassleriana HOM05D005149 ORTHO05D006251 1.2e-136 490.7 449 58.1
Dinv24594 Davidia involucrata HOM05D005149 ORTHO05D006251 1.7e-135 486.9 447 59.5
FAN01G0635 Fragaria x ananassa HOM05D005149 ORTHO05D006251 4.9e-135 485.3 436 58.5
Eucgr.G02641 Eucalyptus grandis HOM05D005149 ORTHO05D006251 8.3e-135 484.6 404 62.1
Thhalv10013568m.g Eutrema salsugineum HOM05D005149 ORTHO05D006251 1.8e-134 483.4 444 58.8
unitig_749.g13551 Utricularia gibba HOM05D005149 ORTHO05D006251 1.8e-134 483.4 438 58.2
Aa31LG11G5780 Aethionema arabicum HOM05D005149 ORTHO05D006251 2.4e-134 483.0 446 57.8
Carub.0010s0002 Capsella rubella HOM05D005149 ORTHO05D006251 3.2e-134 482.6 444 58.6
SGA_v2.0_scaffold196G40993 Striga asiatica HOM05D005149 ORTHO05D006251 2.0e-133 479.9 532 52.3
BraA10t45165Z Brassica rapa HOM05D005149 ORTHO05D006251 3.5e-133 479.2 441 58.3
A10p31210 Brassica napus HOM05D005149 ORTHO05D006251 5.9e-133 478.4 446 58.3
BolC9t59932H Brassica oleracea HOM05D005149 ORTHO05D006251 7.8e-133 478.0 440 58.4
C09p71830 Brassica napus HOM05D005149 ORTHO05D006251 1.1e-131 474.2 440 58.2
CARHR208340 Cardamine hirsuta HOM05D005149 ORTHO05D006251 1.5e-131 473.8 438 58.4
AUR62034100 Chenopodium quinoa HOM05D005149 ORTHO05D006251 1.5e-131 473.8 441 58.3
Peaxi162Scf00647g00319 Petunia axillaris HOM05D005149 ORTHO05D006251 2.5e-131 473.0 432 59.5
Lsat_1_v5_gn_3_25820 Lactuca sativa HOM05D005149 ORTHO05D006251 5.8e-128 461.8 412 61.7
SalBow4G1949 Salvia bowleyana HOM05D005149 ORTHO05D006251 9.8e-128 461.1 425 60.5
BcaC06g32201 Brassica carinata HOM05D005149 ORTHO05D006251 1.9e-126 456.8 444 57.7
CAN.G134.53 Capsicum annuum HOM05D005149 ORTHO05D006251 2.3e-121 439.9 352 64.5
Prupe.2G061300 Prunus persica HOM05D005149 ORTHO05D006251 6.8e-121 438.3 433 55.0
Mapoly0072s0023 Marchantia polymorpha HOM05D005149 ORTHO05D006251 2.6e-120 436.4 433 52.2
Zm00001eb369140 Zea mays HOM05D005149 ORTHO05D006251 5.8e-120 435.3 322 68.9
Pp3c23_21630 Physcomitrium patens HOM05D005149 ORTHO05D006251 6.4e-119 431.8 437 53.5
Nn2g14694 Nelumbo nucifera HOM05D005149 ORTHO05D006251 1.9e-118 430.3 351 65.8
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 4.1e-118 429.1 414 56.5
SHI21243 Sapria himalayana HOM05D005149 ORTHO05D006251 1.3e-116 424.1 414 57.0
Sed0016259 Sechium edule HOM05D005149 ORTHO05D006251 1.5e-115 420.6 458 55.0
TPR.G35740 Trifolium pratense HOM05D005149 ORTHO05D006251 4.7e-114 415.6 262 77.9
GSVIVG01010707001 Vitis vinifera HOM05D005149 ORTHO05D006251 6.2e-114 415.2 262 77.1
AagrBONN_evm.TU.Sc2ySwM_369.549 Anthoceros agrestis HOM05D005149 ORTHO05D006251 1.4e-113 414.1 408 53.4
GSVIVG01027217001 Vitis vinifera HOM05D005149 ORTHO05D006251 4.1e-110 402.5 249 77.9
Cc02_g32050 Coffea canephora HOM05D005149 ORTHO05D006251 2.6e-104 383.3 253 73.5
Duzib106G0431 Durio zibethinus HOM05D005149 ORTHO05D006251 1.4e-102 377.5 449 49.7
SMO011G0007 Selaginella moellendorffii HOM05D005149 ORTHO05D006251 2.1e-101 373.6 410 51.5
Nitab4.5_0005056g0010 Nicotiana tabacum HOM05D005149 ORTHO05D006251 1.2e-96 357.8 424 49.8
Hma1.2p1_0327F.1_g126340 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 4.6e-93 345.9 228 74.1
CBR_g40666 Chara braunii HOM05D005149 ORTHO05D006251 1.3e-90 337.8 490 41.6
ATR0068G114 Amborella trichopoda HOM05D005149 ORTHO05D006251 3.5e-77 293.1 279 58.8
SEGI_09620 Sequoiadendron giganteum HOM05D005149 ORTHO05D006251 2.5e-75 287.0 275 55.3
Gohir.D13G182000 Gossypium hirsutum HOM05D005149 ORTHO05D006251 9.6e-75 285.0 318 52.5
Rhsim01G0121200 Rhododendron simsii HOM05D005149 ORTHO05D006251 1.6e-74 284.3 283 60.1
Sabra08G0007600 Salix brachista HOM05D005149 ORTHO05D006251 1.6e-74 284.3 372 47.0
ClCG08G010780 Citrullus lanatus HOM05D005149 ORTHO05D006251 1.4e-70 271.2 281 55.5
Nn2g14693 Nelumbo nucifera HOM05D005149 ORTHO05D006251 7.9e-69 265.4 246 54.9
VMungo1127G0494 Vigna mungo HOM05D005149 ORTHO05D006251 4.3e-67 259.6 320 49.7
CDE02G4629 Ceratophyllum demersum HOM05D005149 ORTHO05D006251 5.5e-62 242.7 393 40.5
CAN.G134.55 Capsicum annuum HOM05D005149 ORTHO05D006251 1.5e-59 234.6 248 54.4
MCO16G624 Micromonas commoda HOM05D005149 ORTHO05D006251 2.0e-59 234.2 440 38.0
Cre03.g159750 Chlamydomonas reinhardtii HOM05D005149 ORTHO05D006251 1.6e-53 214.5 279 44.4
Hma1.2p1_0327F.1_g126320 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 2.6e-51 207.2 214 57.5
SEGI_10345 Sequoiadendron giganteum HOM05D005149 ORTHO05D006251 2.8e-50 203.8 136 69.9
Cpa.g.sc54.64 Carica papaya HOM05D005149 ORTHO05D006251 1.1e-49 201.8 210 52.9
PRCOL_00005700 Prasinoderma coloniale HOM05D005149 ORTHO05D006251 2.0e-48 197.6 253 43.9
Gorai.013G207600 Gossypium raimondii HOM05D005149 ORTHO05D006251 1.2e-37 161.8 106 76.4
Cpa.g.c41130 Carica papaya HOM05D005149 ORTHO05D006251 8.0e-37 159.1 86 82.6
Glyma.15G221000 Glycine max HOM05D005149 ORTHO05D006251 3.4e-35 153.7 98 79.6
Migut.O00436 Erythranthe guttata HOM05D005149 ORTHO05D006251 1.8e-33 147.9 182 47.3
Cpa.g.sc54.66 Carica papaya HOM05D005149 ORTHO05D006251 2.4e-33 147.5 204 45.1
VMungo1127G1160 Vigna mungo HOM05D005149 ORTHO05D000001 3.2e-30 137.1 74 83.8
COL.COLO4_28905 Corchorus olitorius HOM05D005149 ORTHO05D006251 1.2e-29 135.2 89 68.5
ATR0068G025 Amborella trichopoda HOM05D005149 ORTHO05D006251 1.6e-29 134.8 87 71.3
MD12G1098600 Malus domestica HOM05D005149 ORTHO05D006251 5.2e-28 129.8 85 72.9
Cfa024879 Carpinus fangiana HOM05D005149 ORTHO05D006251 7.5e-27 125.9 330 28.2
AagrBONN_evm.TU.Sc2ySwM_369.516 Anthoceros agrestis HOM05D005149 ORTHO05D006251 5.6e-22 109.8 187 42.2
arahy.Tifrunner.gnm1.ann1.UR2VUR Arachis hypogaea HOM05D005149 ORTHO05D006251 3.7e-18 97.1 66 65.2
BolC2t06178H Brassica oleracea HOM05D005149 ORTHO05D006251 1.7e-15 88.2 69 68.1
AagrBONN_evm.TU.Sc2ySwM_117.426 Anthoceros agrestis HOM05D005149 ORTHO05D006251 2.3e-15 87.8 187 38.0
BcaB04g17834 Brassica carinata HOM05D005149 ORTHO05D017514 2.3e-15 87.8 92 52.2
MBI14_g16397_MAGBIO Magnolia biondii HOM05D005149 ORTHO05D006251 8.0e-13 79.3 51 64.7
BcaC03g13138 Brassica carinata HOM05D005149 ORTHO05D006251 1.8e-12 78.2 82 54.9
Rhsim04G0076600 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.0e-11 74.7 66 56.1


User provided reference genes

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