Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 1.9e-248 862.1 432 100.0
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 8.3e-172 607.4 439 68.3
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 5.4e-171 604.7 440 68.2
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 1.5e-168 596.7 437 66.1
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 1.9e-168 596.3 439 67.4
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 5.5e-168 594.7 438 67.1
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 6.1e-167 591.3 436 67.4
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 4.0e-166 588.6 437 66.6
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 6.8e-166 587.8 437 66.8
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 1.2e-165 587.0 438 66.4
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 2.6e-165 585.9 436 65.4
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 4.4e-165 585.1 436 65.4
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 2.2e-164 582.8 436 65.1
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 8.3e-164 580.9 440 63.0
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 1.1e-163 580.5 439 65.4
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 1.8e-163 579.7 472 62.9
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 2.4e-163 579.3 436 64.9
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 2.4e-163 579.3 437 65.2
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 3.1e-163 578.9 439 64.9
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 4.1e-163 578.6 437 65.2
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 5.4e-163 578.2 437 66.6
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 2.0e-162 576.2 438 64.8
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 2.0e-162 576.2 439 65.6
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 5.9e-162 574.7 439 65.8
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 1.7e-161 573.2 438 66.4
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 2.3e-161 572.8 444 64.9
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 5.0e-161 571.6 436 65.6
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 6.6e-161 571.2 439 64.9
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 8.6e-161 570.9 437 64.3
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 8.6e-161 570.9 437 65.0
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 1.1e-160 570.5 413 67.6
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 1.5e-160 570.1 439 65.6
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 3.3e-160 568.9 438 64.6
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 1.6e-159 566.6 436 65.1
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 2.1e-159 566.2 438 64.2
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 2.8e-159 565.8 438 66.0
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.8e-159 565.8 438 66.0
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 3.6e-159 565.5 437 63.2
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 6.1e-159 564.7 439 64.9
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 8.0e-159 564.3 437 64.1
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 8.0e-159 564.3 439 64.2
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 4.4e-157 558.5 439 63.8
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 1.3e-156 557.0 469 60.8
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 1.9e-155 553.1 438 63.2
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 3.2e-155 552.4 438 62.1
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 9.2e-155 550.8 442 62.4
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 4.6e-154 548.5 437 63.2
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 1.7e-153 546.6 438 63.7
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 5.0e-153 545.0 438 63.7
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 1.1e-152 543.9 438 61.9
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 9.8e-149 530.8 442 61.8
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 8.3e-148 527.7 438 60.3
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 8.3e-148 527.7 435 62.5
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 1.4e-147 526.9 437 59.5
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 1.4e-147 526.9 435 59.8
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 2.4e-147 526.2 437 60.0
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 2.7e-146 522.7 437 59.0
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 3.5e-146 522.3 438 60.0
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 6.0e-146 521.5 437 59.5
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 7.8e-146 521.2 437 59.3
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 4.3e-144 515.4 437 58.8
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 7.3e-144 514.6 437 58.6
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 1.2e-143 513.8 437 59.3
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 4.0e-142 508.8 441 60.5
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.4e-139 500.4 436 60.3
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 5.4e-139 498.4 436 60.6
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 3.5e-138 495.7 444 59.2
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.3e-137 493.0 448 59.2
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 6.6e-137 491.5 456 57.2
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 1.2e-135 487.3 399 62.7
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 4.4e-133 478.8 440 55.9
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 1.7e-132 476.9 435 55.6
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 1.7e-132 476.9 438 55.7
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 1.9e-131 473.4 439 55.8
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 2.4e-131 473.0 440 56.6
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 1.6e-130 470.3 444 56.3
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 3.6e-127 459.1 550 48.2
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 6.2e-127 458.4 452 56.6
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 4.0e-126 455.7 439 56.9
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 3.8e-124 449.1 436 54.4
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 3.2e-123 446.0 435 53.3
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 2.1e-122 443.4 436 56.0
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 5.6e-120 435.3 436 55.0
Atru.chr2.2053 Acer truncatum HOM05D006139 ORTHO05D007681 4.0e-118 429.1 308 69.2
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 8.4e-116 421.4 304 67.4
PGSC0003DMG400014069 Solanum tuberosum HOM05D006139 ORTHO05D007681 9.3e-115 417.9 289 69.6
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 1.9e-112 410.2 308 65.3
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 3.8e-108 396.0 461 49.9
TPR.G8879 Trifolium pratense HOM05D006139 ORTHO05D007681 5.5e-107 392.1 296 66.2
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 5.1e-105 385.6 445 47.9
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 9.6e-104 381.3 398 51.3
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 2.8e-103 379.8 437 47.1
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 1.2e-93 347.8 437 43.7
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 5.7e-80 302.4 433 40.9
DCAR_005496 Daucus carota HOM05D006139 ORTHO05D007681 8.2e-79 298.5 232 65.5
TPR.G8907 Trifolium pratense HOM05D006139 ORTHO05D007681 5.3e-78 295.8 225 66.7
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 6.1e-74 282.3 213 63.8
SHI27652 Sapria himalayana HOM05D006139 ORTHO05D007681 1.1e-59 235.0 217 53.0
Ah.03g143030 Amaranthus hybridus HOM05D006139 ORTHO05D007681 5.7e-56 222.6 185 62.2
FAN22G0061 Fragaria x ananassa HOM05D006139 ORTHO05D007681 9.1e-54 215.3 169 65.7
unitig_578.g15954 Utricularia gibba HOM05D006139 ORTHO05D004041 7.2e-51 205.7 163 62.0
Ca_11425_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 2.2e-47 194.1 134 70.9
Cre13.g607500 Chlamydomonas reinhardtii HOM05D006139 ORTHO05D007681 4.9e-47 193.0 407 33.7
arahy.Tifrunner.gnm1.ann1.6RHH59 Arachis hypogaea HOM05D006139 ORTHO05D007681 1.8e-41 174.5 128 63.3
TPR.G8868 Trifolium pratense HOM05D006139 ORTHO05D007681 4.1e-38 163.3 142 54.9
SEGI_35314 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 5.4e-38 162.9 145 55.9
Cfa021664 Carpinus fangiana HOM05D006139 ORTHO05D007681 8.6e-36 155.6 459 28.1
CANSAT78G0600 Cannabis sativa HOM05D006139 ORTHO05D007681 5.8e-32 142.9 118 54.2
Ca_11424_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 2.3e-28 131.0 105 62.9
MCO14G338 Micromonas commoda HOM05D006139 ORTHO05D007681 4.7e-26 123.2 416 27.2
SEGI_31905 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 7.1e-22 109.4 73 67.1
Atru.chr2.2052 Acer truncatum HOM05D006139 ORTHO05D007681 5.6e-19 99.8 82 59.8
BolC4t22161H Brassica oleracea HOM05D006139 ORTHO05D007681 3.4e-16 90.5 71 57.7
HanXRQChr13g0406711 Helianthus annuus HOM05D006139 ORTHO05D007681 5.4e-14 83.2 53 75.5
Potri.006G132501 Populus trichocarpa HOM05D006139 ORTHO05D007681 1.0e-12 79.0 77 53.2
Os07g0184900 Oryza sativa ssp. japonica HOM05D006139 ORTHO05D007681 3.3e-11 73.9 59 55.9
DCAR_005495 Daucus carota HOM05D006139 ORTHO05D007681 6.2e-10 69.7 55 63.6
vmacro12608 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 6.9e-09 66.2 64 59.4
Ca_11423_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 9.0e-09 65.9 58 55.2
Dinv25612 Davidia involucrata HOM05D000447 ORTHO05D007681 4.4e-08 63.5 79 48.1
unitig_578.g15953 Utricularia gibba HOM05D006139 ORTHO05D007681 8.4e-07 59.3 58 50.0


User provided reference genes

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