Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001090 Vanilla planifolia HOM05D003387 ORTHO05D005400 3.7e-123 444.9 224 100.0
MBI16_g07738_MAGBIO Magnolia biondii HOM05D003387 ORTHO05D005400 1.3e-80 303.5 215 68.8
Nn1g06041 Nelumbo nucifera HOM05D003387 ORTHO05D005400 1.7e-80 303.1 222 67.6
SGA_v2.0_scaffold274G46519 Striga asiatica HOM05D003387 ORTHO05D005400 2.3e-80 302.8 218 65.6
Nn5g28791 Nelumbo nucifera HOM05D003387 ORTHO05D005400 1.1e-79 300.4 215 68.8
CiPaw.04G088200 Carya illinoinensis HOM05D003387 ORTHO05D005400 1.9e-79 299.7 215 66.5
Ciclev10001148m.g Citrus clementina HOM05D003387 ORTHO05D005400 1.9e-79 299.7 214 67.3
Cfa002795 Carpinus fangiana HOM05D003387 ORTHO05D005400 4.3e-79 298.5 215 67.0
CSS0049572 Camellia sinensis var. sinensis HOM05D003387 ORTHO05D005400 7.3e-79 297.7 216 68.5
Nitab4.5_0010347g0020 Nicotiana tabacum HOM05D003387 ORTHO05D005400 9.5e-79 297.4 218 65.6
THA.LOC104804671 Tarenaya hassleriana HOM05D003387 ORTHO05D005400 9.5e-79 297.4 215 66.0
Haze_25093 Corylus avellana HOM05D003387 ORTHO05D005400 1.2e-78 297.0 219 65.3
Manes.02G181600 Manihot esculenta HOM05D003387 ORTHO05D005400 1.2e-78 297.0 214 66.4
arahy.Tifrunner.gnm1.ann1.LGJ4PH Arachis hypogaea HOM05D003387 ORTHO05D005400 1.6e-78 296.6 215 66.5
Cc04_g09690 Coffea canephora HOM05D003387 ORTHO05D005400 1.6e-78 296.6 215 67.4
Duzib093G0739 Durio zibethinus HOM05D003387 ORTHO05D005400 1.6e-78 296.6 214 67.3
CSS0039159 Camellia sinensis var. sinensis HOM05D003387 ORTHO05D005400 2.1e-78 296.2 215 66.5
Gohir.A02G063500 Gossypium hirsutum HOM05D003387 ORTHO05D005400 2.1e-78 296.2 214 66.8
Cfa018305 Carpinus fangiana HOM05D003387 ORTHO05D005400 4.7e-78 295.0 215 65.6
Nitab4.5_0002445g0040 Nicotiana tabacum HOM05D003387 ORTHO05D005400 4.7e-78 295.0 215 66.5
PSO700G0143 Papaver somniferum HOM05D003387 ORTHO05D005400 4.7e-78 295.0 215 66.5
HPP92_002768 Vanilla planifolia HOM05D003387 ORTHO05D005400 6.2e-78 294.7 216 65.7
Duzib116G0668 Durio zibethinus HOM05D003387 ORTHO05D005400 8.0e-78 294.3 215 66.0
Eucgr.F02695 Eucalyptus grandis HOM05D003387 ORTHO05D005400 8.0e-78 294.3 215 66.0
Peaxi162Scf00076g00821 Petunia axillaris HOM05D003387 ORTHO05D005400 8.0e-78 294.3 215 66.5
PGR042G1308 Punica granatum HOM05D003387 ORTHO05D005400 8.0e-78 294.3 215 66.0
Atru.chr13.2064 Acer truncatum HOM05D003387 ORTHO05D005400 1.0e-77 293.9 214 64.5
Gorai.005G078200 Gossypium raimondii HOM05D003387 ORTHO05D005400 1.0e-77 293.9 214 66.4
Manes.18G093400 Manihot esculenta HOM05D003387 ORTHO05D005400 1.0e-77 293.9 214 65.9
Prupe.8G036700 Prunus persica HOM05D003387 ORTHO05D005400 1.0e-77 293.9 215 67.0
QL02p038708 Quercus lobata HOM05D003387 ORTHO05D005400 1.0e-77 293.9 221 63.8
Sp1g32390 Schrenkiella parvula HOM05D003387 ORTHO05D005400 1.0e-77 293.9 215 64.7
Thecc.08G155500 Theobroma cacao HOM05D003387 ORTHO05D005400 1.0e-77 293.9 214 66.8
AL1G51590 Arabidopsis lyrata HOM05D003387 ORTHO05D005400 1.4e-77 293.5 215 64.7
MD04G1044700 Malus domestica HOM05D003387 ORTHO05D005400 1.4e-77 293.5 215 67.4
PSO170G1597 Papaver somniferum HOM05D003387 ORTHO05D005400 1.4e-77 293.5 215 66.0
GSVIVG01034558001 Vitis vinifera HOM05D003387 ORTHO05D005400 1.4e-77 293.5 215 67.4
AT1G43190 Arabidopsis thaliana HOM05D003387 ORTHO05D005400 1.8e-77 293.1 215 64.2
Migut.K00003 Erythranthe guttata HOM05D003387 ORTHO05D005400 1.8e-77 293.1 215 65.1
Sopen10g031260 Solanum pennellii HOM05D003387 ORTHO05D005400 1.8e-77 293.1 215 65.6
TWI60G0696 Tripterygium wilfordii HOM05D003387 ORTHO05D005400 1.8e-77 293.1 215 66.0
BcaB04g17624 Brassica carinata HOM05D003387 ORTHO05D005400 3.1e-77 292.4 215 63.7
A08p06460 Brassica napus HOM05D003387 ORTHO05D005400 3.1e-77 292.4 215 63.7
BraA08t32655Z Brassica rapa HOM05D003387 ORTHO05D005400 3.1e-77 292.4 215 63.7
Carub.0001s3449 Capsella rubella HOM05D003387 ORTHO05D005400 3.1e-77 292.4 218 63.3
FAN15G3239 Fragaria x ananassa HOM05D003387 ORTHO05D005400 3.1e-77 292.4 215 66.5
FAN24G3173 Fragaria x ananassa HOM05D003387 ORTHO05D005400 3.1e-77 292.4 215 66.5
CANSAT25G0465 Cannabis sativa HOM05D003387 ORTHO05D005400 4.0e-77 292.0 215 66.5
CARHR035330 Cardamine hirsuta HOM05D003387 ORTHO05D005400 4.0e-77 292.0 215 64.2
FAN20G0358 Fragaria x ananassa HOM05D003387 ORTHO05D005400 4.0e-77 292.0 215 66.5
Solyc10g080720.2 Solanum lycopersicum HOM05D003387 ORTHO05D005400 4.0e-77 292.0 215 65.1
ClCG08G002590 Citrullus lanatus HOM05D003387 ORTHO05D005400 6.8e-77 291.2 216 65.3
DCAR_014445 Daucus carota HOM05D003387 ORTHO05D005400 6.8e-77 291.2 215 65.6
TWI34G1705 Tripterygium wilfordii HOM05D003387 ORTHO05D005400 6.8e-77 291.2 215 65.6
CiPaw.16G009800 Carya illinoinensis HOM05D003387 ORTHO05D005400 8.9e-77 290.8 215 64.7
Gohir.D02G069100 Gossypium hirsutum HOM05D003387 ORTHO05D005400 8.9e-77 290.8 214 65.4
Sed0017554 Sechium edule HOM05D003387 ORTHO05D005400 8.9e-77 290.8 215 65.1
PGSC0003DMG400023660 Solanum tuberosum HOM05D003387 ORTHO05D005400 8.9e-77 290.8 215 64.7
BolC8t47590H Brassica oleracea HOM05D003387 ORTHO05D005400 1.2e-76 290.4 222 62.2
Dinv25885 Davidia involucrata HOM05D003387 ORTHO05D005400 1.2e-76 290.4 215 65.6
Eucgr.F04205 Eucalyptus grandis HOM05D003387 ORTHO05D005400 1.2e-76 290.4 215 65.6
RcHm_v2.0_Chr6g0274691 Rosa chinensis HOM05D003387 ORTHO05D005400 1.2e-76 290.4 215 66.0
Haze_17786 Corylus avellana HOM05D003387 ORTHO05D005400 1.5e-76 290.0 215 64.2
FvH4_2g13280 Fragaria vesca HOM05D003387 ORTHO05D005400 1.5e-76 290.0 215 66.0
Hund26682 Selenicereus undatus HOM05D003387 ORTHO05D005400 1.5e-76 290.0 215 64.2
QL02p037730 Quercus lobata HOM05D003387 ORTHO05D005400 2.0e-76 289.7 213 65.3
Glyma.20G168400 Glycine max HOM05D003387 ORTHO05D005400 2.6e-76 289.3 215 66.0
Aqoxy2G00397 Aquilegia oxysepala HOM05D003387 ORTHO05D005400 3.4e-76 288.9 215 65.1
BcaC07g37311 Brassica carinata HOM05D003387 ORTHO05D005400 3.4e-76 288.9 215 63.3
C08p07450 Brassica napus HOM05D003387 ORTHO05D005400 3.4e-76 288.9 215 63.3
Cpa.g.sc49.99 Carica papaya HOM05D003387 ORTHO05D005400 3.4e-76 288.9 208 65.9
MELO3C024993.2 Cucumis melo HOM05D003387 ORTHO05D005400 3.4e-76 288.9 216 64.4
CsaV3_6G002770 Cucumis sativus L. HOM05D003387 ORTHO05D005400 3.4e-76 288.9 216 64.4
HanXRQChr05g0144181 Helianthus annuus HOM05D003387 ORTHO05D005400 3.4e-76 288.9 215 64.2
FAN27G0365 Fragaria x ananassa HOM05D003387 ORTHO05D005400 4.4e-76 288.5 215 66.0
PSO675G7282 Papaver somniferum HOM05D003387 ORTHO05D005400 4.4e-76 288.5 215 65.1
Actinidia29542 Actinidia chinensis HOM05D003387 ORTHO05D005400 7.5e-76 287.7 215 65.1
CiPaw.15G014400 Carya illinoinensis HOM05D003387 ORTHO05D005400 9.8e-76 287.3 215 64.7
CDE08G0132 Ceratophyllum demersum HOM05D003387 ORTHO05D005400 9.8e-76 287.3 215 63.7
ECA232G0053 Erigeron canadensis HOM05D003387 ORTHO05D005400 9.8e-76 287.3 216 63.4
Lsat_1_v5_gn_9_41940 Lactuca sativa HOM05D003387 ORTHO05D005400 9.8e-76 287.3 224 62.1
Medtr6g043520 Medicago truncatula HOM05D003387 ORTHO05D005400 9.8e-76 287.3 221 63.8
PSO541G1407 Papaver somniferum HOM05D003387 ORTHO05D005400 9.8e-76 287.3 215 64.7
Phvul.007G081900 Phaseolus vulgaris HOM05D003387 ORTHO05D005400 9.8e-76 287.3 215 65.1
Sed0013690 Sechium edule HOM05D003387 ORTHO05D005400 9.8e-76 287.3 217 63.1
Thhalv10004261m.g Eutrema salsugineum HOM05D003387 ORTHO05D005400 1.3e-75 287.0 215 63.3
VMungo0720G1662 Vigna mungo HOM05D003387 ORTHO05D005400 1.3e-75 287.0 215 65.1
arahy.Tifrunner.gnm1.ann1.9CFF48 Arachis hypogaea HOM05D003387 ORTHO05D005400 2.2e-75 286.2 216 64.4
arahy.Tifrunner.gnm1.ann1.K61U57 Arachis hypogaea HOM05D003387 ORTHO05D005400 2.2e-75 286.2 216 64.4
Potri.002G066000 Populus trichocarpa HOM05D003387 ORTHO05D005400 2.2e-75 286.2 214 64.5
Aa31LG6G9950 Aethionema arabicum HOM05D003387 ORTHO05D005400 2.9e-75 285.8 217 61.8
TAR376G0277 Trochodendron aralioides HOM05D003387 ORTHO05D005400 2.9e-75 285.8 214 65.9
COL.COLO4_03566 Corchorus olitorius HOM05D003387 ORTHO05D005400 3.7e-75 285.4 213 64.3
Medtr1g098530 Medicago truncatula HOM05D003387 ORTHO05D005400 3.7e-75 285.4 215 64.7
Ca_10675_v3 Cicer arietinum L. HOM05D003387 ORTHO05D005400 4.9e-75 285.0 215 64.7
Psat6g192160 Pisum sativum HOM05D003387 ORTHO05D005400 4.9e-75 285.0 215 64.7
Potri.005G194700 Populus trichocarpa HOM05D003387 ORTHO05D005400 4.9e-75 285.0 214 63.6
Sopen12g010100 Solanum pennellii HOM05D003387 ORTHO05D005400 4.9e-75 285.0 215 64.7
CDE06G0083 Ceratophyllum demersum HOM05D003387 ORTHO05D005400 6.4e-75 284.6 215 63.3
AUR62026677 Chenopodium quinoa HOM05D003387 ORTHO05D005400 6.4e-75 284.6 215 64.2
Glyma.02G080500 Glycine max HOM05D003387 ORTHO05D005400 6.4e-75 284.6 216 63.9
AUR62040585 Chenopodium quinoa HOM05D003387 ORTHO05D005400 8.3e-75 284.3 215 64.2
Lalb_Chr19g0130191 Lupinus albus HOM05D003387 ORTHO05D005400 8.3e-75 284.3 214 64.0
Glyma.16G165000 Glycine max HOM05D003387 ORTHO05D005400 1.4e-74 283.5 216 63.4
Lj5g0027187 Lotus japonicus HOM05D003387 ORTHO05D005400 1.4e-74 283.5 215 63.7
QL06p031240 Quercus lobata HOM05D003387 ORTHO05D005400 1.4e-74 283.5 213 63.8
Sabra05G0148200 Salix brachista HOM05D003387 ORTHO05D005400 1.4e-74 283.5 213 63.4
PGSC0003DMG400018824 Solanum tuberosum HOM05D003387 ORTHO05D005400 1.4e-74 283.5 215 64.7
TAR628G0869 Trochodendron aralioides HOM05D003387 ORTHO05D005400 1.4e-74 283.5 209 66.0
Zm00001eb289150 Zea mays HOM05D003387 ORTHO05D005400 1.4e-74 283.5 215 62.8
ATR0115G003 Amborella trichopoda HOM05D003387 ORTHO05D005400 1.9e-74 283.1 215 61.9
Solyc12g019750.3 Solanum lycopersicum HOM05D003387 ORTHO05D005400 1.9e-74 283.1 214 64.5
Glyma.10G223300 Glycine max HOM05D003387 ORTHO05D005400 3.2e-74 282.3 215 64.7
Zm00001eb348540 Zea mays HOM05D003387 ORTHO05D005400 3.2e-74 282.3 215 61.4
arahy.Tifrunner.gnm1.ann1.RF14FM Arachis hypogaea HOM05D003387 ORTHO05D005400 5.4e-74 281.6 201 66.2
EL10Ac1g01585 Beta vulgaris HOM05D003387 ORTHO05D005400 5.4e-74 281.6 215 63.3
ATR1126G056 Amborella trichopoda HOM05D003387 ORTHO05D005400 7.0e-74 281.2 211 63.5
Os05g0437300 Oryza sativa ssp. japonica HOM05D003387 ORTHO05D005400 1.2e-73 280.4 215 61.4
Psat1g100400 Pisum sativum HOM05D003387 ORTHO05D005400 1.2e-73 280.4 216 61.6
Ah.02g123810 Amaranthus hybridus HOM05D003387 ORTHO05D005400 1.6e-73 280.0 212 63.2
TPR.G28008 Trifolium pratense HOM05D003387 ORTHO05D005400 4.6e-73 278.5 216 62.0
Ah.05g168100 Amaranthus hybridus HOM05D003387 ORTHO05D005400 6.0e-73 278.1 223 61.9
EL10Ac6g15237 Beta vulgaris HOM05D003387 ORTHO05D005400 1.7e-72 276.6 212 62.3
TPR.G17034 Trifolium pratense HOM05D003387 ORTHO05D005400 2.3e-72 276.2 210 62.9
vmacro01482 Vaccinium macrocarpon HOM05D003387 ORTHO05D005400 2.3e-72 276.2 240 58.8
Ca_04511_v3 Cicer arietinum L. HOM05D003387 ORTHO05D005400 5.0e-72 275.0 216 62.0
Hund19618 Selenicereus undatus HOM05D003387 ORTHO05D005400 5.0e-72 275.0 203 64.0
SEGI_27673 Sequoiadendron giganteum HOM05D003387 ORTHO05D005400 1.1e-71 273.9 220 62.3
Sc16g0004050 Simmondsia chinensis HOM05D003387 ORTHO05D005400 1.1e-71 273.9 210 62.9
Phvul.004G092400 Phaseolus vulgaris HOM05D003387 ORTHO05D005400 5.6e-71 271.6 216 61.1
AUR62003637 Chenopodium quinoa HOM05D003387 ORTHO05D005400 1.2e-70 270.4 212 59.4
Lj7C377G3 Lonicera japonica HOM05D003387 ORTHO05D005400 1.2e-70 270.4 220 61.8
Lalb_Chr21g0305541 Lupinus albus HOM05D003387 ORTHO05D005400 2.1e-70 269.6 218 61.9
VMungo0464G0875 Vigna mungo HOM05D003387 ORTHO05D005400 2.1e-70 269.6 211 61.1
Lalb_Chr06g0161681 Lupinus albus HOM05D003387 ORTHO05D005400 1.8e-69 266.5 216 60.2
Mapoly0001s0481 Marchantia polymorpha HOM05D003387 ORTHO05D005400 6.8e-69 264.6 214 58.4
arahy.Tifrunner.gnm1.ann1.BQ9MTK Arachis hypogaea HOM05D003387 ORTHO05D005400 1.2e-68 263.8 231 57.1
Os01g0867800 Oryza sativa ssp. japonica HOM05D003387 ORTHO05D005400 4.4e-68 261.9 215 60.9
Pp3c14_17110 Physcomitrium patens HOM05D003387 ORTHO05D005400 7.5e-68 261.2 214 57.9
Lalb_Chr02g0141481 Lupinus albus HOM05D003387 ORTHO05D005400 1.7e-67 260.0 216 59.3
Pp3c14_14100 Physcomitrium patens HOM05D003387 ORTHO05D005400 2.9e-67 259.2 214 57.9
AagrBONN_evm.TU.Sc2ySwM_368.3328 Anthoceros agrestis HOM05D003387 ORTHO05D005400 9.2e-66 254.2 216 57.9
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 1.2e-65 253.8 192 64.6
THA.LOC104809206 Tarenaya hassleriana HOM05D003387 ORTHO05D005400 1.6e-65 253.4 221 57.9
CBR_g7995 Chara braunii HOM05D003387 ORTHO05D005400 1.1e-63 247.3 214 53.7
SMO146G0032 Selaginella moellendorffii HOM05D003387 ORTHO05D005400 6.8e-61 238.0 202 54.5
arahy.Tifrunner.gnm1.ann1.NR2FSQ Arachis hypogaea HOM05D003387 ORTHO05D005400 1.6e-49 200.3 186 54.8
Peaxi162Scf00249g00068 Petunia axillaris HOM05D003387 ORTHO05D031551 2.3e-48 196.4 213 50.7
Nitab4.5_0003909g0020 Nicotiana tabacum HOM05D003387 ORTHO05D005400 3.4e-44 182.6 215 47.0
Lj2g0008478 Lotus japonicus HOM05D003387 ORTHO05D005400 3.8e-43 179.1 215 45.6
SMO146G0120 Selaginella moellendorffii HOM05D003387 ORTHO05D002201 1.9e-39 166.8 213 43.2
Mapoly0051s0071 Marchantia polymorpha HOM05D003387 ORTHO05D255399 8.4e-35 151.4 175 46.3
Medtr6g037540 Medicago truncatula HOM05D003387 ORTHO05D030081 1.4e-34 150.6 127 55.9
SMO171G0107 Selaginella moellendorffii HOM05D003387 ORTHO05D002201 3.2e-34 149.4 199 43.7
GSVIVG01022282001 Vitis vinifera HOM05D003387 ORTHO05D005400 1.8e-29 133.7 85 78.8
Medtr6g037550 Medicago truncatula HOM05D003387 ORTHO05D005400 2.0e-28 130.2 91 70.3
arahy.Tifrunner.gnm1.ann1.M2ZNIJ Arachis hypogaea HOM05D003387 ORTHO05D031551 5.5e-26 122.1 82 73.2
MD00G1066300 Malus domestica HOM05D003387 ORTHO05D005400 7.1e-26 121.7 85 74.1
Medtr6g037510 Medicago truncatula HOM05D003387 ORTHO05D031551 1.8e-24 117.1 84 70.2
SMO171G0059 Selaginella moellendorffii HOM05D003387 ORTHO05D376012 4.3e-23 112.5 203 36.0
TPR.G28006 Trifolium pratense HOM05D003387 ORTHO05D030081 9.6e-23 111.3 96 54.2
MD00G1066200 Malus domestica HOM05D003387 ORTHO05D030081 8.5e-19 98.2 78 55.1
Medtr8g072130 Medicago truncatula HOM05D003387 ORTHO05D030081 1.4e-18 97.4 120 41.7
SalBow1G1267 Salvia bowleyana HOM05D003387 ORTHO05D005400 3.7e-14 82.8 49 81.6
Carub.0001s4466 Capsella rubella HOM05D003387 ORTHO05D114561 4.5e-12 75.9 74 54.1
Medtr6g037520 Medicago truncatula HOM05D003387 ORTHO05D257462 5.1e-08 62.4 47 55.3
Sed0019724 Sechium edule HOM05D000561 ORTHO05D000514 7.4e-07 58.5 111 32.4
PSO063G3279 Papaver somniferum HOM05D001628 ORTHO05D001568 9.7e-07 58.2 174 31.0
FAN09G4613 Fragaria x ananassa HOM05D000428 ORTHO05D000582 1.3e-06 57.8 191 25.7
AL4G46040 Arabidopsis lyrata HOM05D001628 ORTHO05D001568 1.7e-06 57.4 187 29.9
Oeu042950.1 Olea europaea HOM05D001628 ORTHO05D001568 1.7e-06 57.4 173 28.3
PSO135G0719 Papaver somniferum HOM05D001628 ORTHO05D001568 2.2e-06 57.0 174 30.5
SMO196G0024 Selaginella moellendorffii HOM05D003387 ORTHO05D375944 2.2e-06 57.0 81 35.8
FAN02G1116 Fragaria x ananassa HOM05D000428 ORTHO05D000582 4.8e-06 55.8 191 25.1
Potri.004G017200 Populus trichocarpa HOM05D000561 ORTHO05D000514 4.8e-06 55.8 95 34.7
Sabra04G0009500 Salix brachista HOM05D000561 ORTHO05D000514 4.8e-06 55.8 106 32.1
Sed0017502 Sechium edule HOM05D001628 ORTHO05D001568 4.8e-06 55.8 173 27.7
PGSC0003DMG400018875 Solanum tuberosum HOM05D001628 ORTHO05D001568 4.8e-06 55.8 176 30.1
FAN14G0770 Fragaria x ananassa HOM05D000428 ORTHO05D000582 6.3e-06 55.5 191 25.1
Actinidia10635 Actinidia chinensis HOM05D003387 ORTHO05D005400 8.2e-06 55.1 37 73.0
FvH4_6g17300 Fragaria vesca HOM05D000428 ORTHO05D000582 8.2e-06 55.1 191 25.1
Nitab4.5_0003517g0010 Nicotiana tabacum HOM05D001628 ORTHO05D001568 8.2e-06 55.1 172 26.2


User provided reference genes

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