Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.01G142851 Glycine max HOM05D004484 ORTHO05D005370 1.3e-85 319.7 165 100.0
Glyma.05G125700 Glycine max HOM05D004484 ORTHO05D005370 9.8e-73 276.9 164 87.2
Phvul.002G205800 Phaseolus vulgaris HOM05D004484 ORTHO05D005370 1.0e-69 266.9 164 84.8
Psat7g233440 Pisum sativum HOM05D004484 ORTHO05D005370 6.1e-67 257.7 164 82.3
Medtr4g023560 Medicago truncatula HOM05D004484 ORTHO05D005370 1.4e-66 256.5 164 81.7
Ca_19886_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 5.2e-66 254.6 164 80.5
Ca_27059_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 6.8e-66 254.2 164 80.5
Lalb_Chr13g0291731 Lupinus albus HOM05D004484 ORTHO05D005370 1.2e-65 253.4 164 79.9
TPR.G9845 Trifolium pratense HOM05D004484 ORTHO05D005370 4.4e-65 251.5 164 79.3
VMungo0251G1206 Vigna mungo HOM05D004484 ORTHO05D005370 7.5e-65 250.8 164 80.5
Lj3g0013484 Lotus japonicus HOM05D004484 ORTHO05D005370 1.7e-64 249.6 164 78.7
arahy.Tifrunner.gnm1.ann1.Q9SWB6 Arachis hypogaea HOM05D004484 ORTHO05D005370 4.1e-63 245.0 164 77.4
arahy.Tifrunner.gnm1.ann1.V1M046 Arachis hypogaea HOM05D004484 ORTHO05D005370 2.7e-62 242.3 164 76.8
arahy.Tifrunner.gnm1.ann1.6K85L9 Arachis hypogaea HOM05D004484 ORTHO05D005370 5.9e-62 241.1 164 76.2
arahy.Tifrunner.gnm1.ann1.HW1IVJ Arachis hypogaea HOM05D004484 ORTHO05D005370 5.9e-62 241.1 164 76.2
Lalb_Chr12g0208261 Lupinus albus HOM05D004484 ORTHO05D005370 1.6e-59 233.0 164 72.0
CANSAT56G1200 Cannabis sativa HOM05D004484 ORTHO05D005370 4.0e-58 228.4 164 72.0
CANSAT56G4533 Cannabis sativa HOM05D004484 ORTHO05D005370 4.0e-58 228.4 164 72.0
QL08p052472 Quercus lobata HOM05D004484 ORTHO05D005370 1.9e-55 219.5 164 68.3
Potri.014G069700 Populus trichocarpa HOM05D004484 ORTHO05D005370 4.6e-54 214.9 164 66.5
Atru.chr5.309 Acer truncatum HOM05D004484 ORTHO05D005370 7.8e-54 214.2 164 65.2
Cfa001721 Carpinus fangiana HOM05D004484 ORTHO05D005370 7.8e-54 214.2 164 65.9
Dinv32377 Davidia involucrata HOM05D004484 ORTHO05D005370 7.8e-54 214.2 164 66.5
Prupe.2G145600 Prunus persica HOM05D004484 ORTHO05D005370 7.8e-54 214.2 164 66.5
Thecc.01G376200 Theobroma cacao HOM05D004484 ORTHO05D005370 1.0e-53 213.8 164 68.9
MD07G1121000 Malus domestica HOM05D004484 ORTHO05D005370 1.7e-53 213.0 164 66.5
TWI23G0227 Tripterygium wilfordii HOM05D004484 ORTHO05D005370 5.0e-53 211.5 164 67.7
Aqoxy5G00403 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 6.6e-53 211.1 164 66.5
Nn1g01233 Nelumbo nucifera HOM05D004484 ORTHO05D005370 6.6e-53 211.1 164 65.2
Hund27347 Selenicereus undatus HOM05D004484 ORTHO05D005370 6.6e-53 211.1 164 65.2
ClCG05G002220 Citrullus lanatus HOM05D004484 ORTHO05D005370 1.1e-52 210.3 164 64.0
Lj7A528T57 Lonicera japonica HOM05D004484 ORTHO05D005370 1.1e-52 210.3 164 66.5
MBI12_g10758_MAGBIO Magnolia biondii HOM05D004484 ORTHO05D005370 1.5e-52 209.9 164 65.9
Manes.01G265900 Manihot esculenta HOM05D004484 ORTHO05D005370 1.9e-52 209.5 164 64.6
PSO478G5008 Papaver somniferum HOM05D004484 ORTHO05D005370 1.9e-52 209.5 164 65.9
Gohir.D11G085300 Gossypium hirsutum HOM05D004484 ORTHO05D005370 2.5e-52 209.1 164 65.9
Gorai.007G091100 Gossypium raimondii HOM05D004484 ORTHO05D005370 2.5e-52 209.1 164 65.9
TAR629G2468 Trochodendron aralioides HOM05D004484 ORTHO05D005370 2.5e-52 209.1 164 66.5
Hma1.2p1_0086F.1_g044870 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 4.3e-52 208.4 164 64.6
GSVIVG01027610001 Vitis vinifera HOM05D004484 ORTHO05D005370 5.6e-52 208.0 164 64.0
CiPaw.01G262000 Carya illinoinensis HOM05D004484 ORTHO05D005370 7.3e-52 207.6 164 65.9
Cc02_g36700 Coffea canephora HOM05D004484 ORTHO05D005370 7.3e-52 207.6 164 65.2
Potri.002G148200 Populus trichocarpa HOM05D004484 ORTHO05D005370 1.2e-51 206.8 164 64.6
MELO3C006188.2 Cucumis melo HOM05D004484 ORTHO05D005370 3.6e-51 205.3 164 62.8
Gohir.A11G080700 Gossypium hirsutum HOM05D004484 ORTHO05D005370 3.6e-51 205.3 164 64.6
Sc02g0002590 Simmondsia chinensis HOM05D004484 ORTHO05D005370 3.6e-51 205.3 164 64.6
EL10Ac1g00900 Beta vulgaris HOM05D004484 ORTHO05D005370 1.1e-50 203.8 164 61.6
AUR62004221 Chenopodium quinoa HOM05D004484 ORTHO05D005370 1.8e-50 203.0 164 62.2
THA.LOC104817247 Tarenaya hassleriana HOM05D004484 ORTHO05D005370 1.8e-50 203.0 164 62.2
MSTRG.20748 Avicennia marina HOM05D004484 ORTHO05D005370 2.3e-50 202.6 164 64.0
Ah.13g073490 Amaranthus hybridus HOM05D004484 ORTHO05D005370 3.1e-50 202.2 164 62.8
PGR042G0667 Punica granatum HOM05D004484 ORTHO05D005370 4.0e-50 201.8 164 62.2
Cpa.g.sc18.115 Carica papaya HOM05D004484 ORTHO05D005370 6.8e-50 201.1 164 62.2
CsaV3_3G009680 Cucumis sativus L. HOM05D004484 ORTHO05D005370 6.8e-50 201.1 164 61.6
Nitab4.5_0000457g0330 Nicotiana tabacum HOM05D004484 ORTHO05D005370 6.8e-50 201.1 164 62.2
RcHm_v2.0_Chr1g0350581 Rosa chinensis HOM05D004484 ORTHO05D005370 1.5e-49 199.9 164 61.6
Sed0020955 Sechium edule HOM05D004484 ORTHO05D005370 2.0e-49 199.5 164 62.8
COL.COLO4_07018 Corchorus olitorius HOM05D004484 ORTHO05D005370 4.4e-49 198.4 164 63.4
PGSC0003DMG400012761 Solanum tuberosum HOM05D004484 ORTHO05D005370 7.5e-49 197.6 164 61.0
CAN.G388.13 Capsicum annuum HOM05D004484 ORTHO05D005370 1.3e-48 196.8 164 61.6
FAN06G3319 Fragaria x ananassa HOM05D004484 ORTHO05D005370 2.2e-48 196.1 164 60.4
FAN01G0628 Fragaria x ananassa HOM05D004484 ORTHO05D005370 2.9e-48 195.7 164 59.8
Oeu055487.1 Olea europaea HOM05D004484 ORTHO05D005370 3.7e-48 195.3 164 60.4
FAN10G1483 Fragaria x ananassa HOM05D004484 ORTHO05D005370 6.4e-48 194.5 164 59.8
FvH4_7g11900 Fragaria vesca HOM05D004484 ORTHO05D005370 8.3e-48 194.1 164 59.8
FAN06G1787 Fragaria x ananassa HOM05D004484 ORTHO05D005370 8.3e-48 194.1 164 59.8
Nitab4.5_0005372g0070 Nicotiana tabacum HOM05D004484 ORTHO05D005370 8.3e-48 194.1 164 61.0
Eucgr.E01418 Eucalyptus grandis HOM05D004484 ORTHO05D005370 1.9e-47 193.0 164 58.5
Peaxi162Scf00021g01723 Petunia axillaris HOM05D004484 ORTHO05D005370 1.9e-47 193.0 164 58.5
SHI13523 Sapria himalayana HOM05D004484 ORTHO05D005370 2.4e-47 192.6 164 61.0
SGA_v2.0_scaffold153G37012 Striga asiatica HOM05D004484 ORTHO05D005370 3.2e-47 192.2 164 60.4
CARHR037700 Cardamine hirsuta HOM05D004484 ORTHO05D005370 9.2e-47 190.7 164 59.1
FAN10G2369 Fragaria x ananassa HOM05D004484 ORTHO05D005370 1.6e-46 189.9 164 58.5
DCAR_015907 Daucus carota HOM05D004484 ORTHO05D005370 3.5e-46 188.7 164 60.4
CSS0036976 Camellia sinensis var. sinensis HOM05D004484 ORTHO05D005370 6.0e-46 188.0 164 61.6
AL1G54570 Arabidopsis lyrata HOM05D004484 ORTHO05D005370 1.3e-45 186.8 164 57.3
COL.COLO4_12548 Corchorus olitorius HOM05D004484 ORTHO05D005370 1.3e-45 186.8 164 62.2
Migut.B01635 Erythranthe guttata HOM05D004484 ORTHO05D005370 1.7e-45 186.4 164 58.5
BolC8t47375H Brassica oleracea HOM05D004484 ORTHO05D005370 2.3e-45 186.0 164 57.3
Carub.0001s3716 Capsella rubella HOM05D004484 ORTHO05D005370 3.0e-45 185.7 164 56.7
C08p05620 Brassica napus HOM05D004484 ORTHO05D005370 3.9e-45 185.3 164 57.3
Ciclev10019016m.g Citrus clementina HOM05D004484 ORTHO05D005370 3.9e-45 185.3 164 57.9
Sp1g35020 Schrenkiella parvula HOM05D004484 ORTHO05D005370 5.1e-45 184.9 164 56.1
BcaB04g17469 Brassica carinata HOM05D004484 ORTHO05D005370 6.6e-45 184.5 165 57.0
BraSC267t45947Z Brassica rapa HOM05D004484 ORTHO05D005370 8.6e-45 184.1 164 56.7
Solyc01g091350.4 Solanum lycopersicum HOM05D004484 ORTHO05D005370 8.6e-45 184.1 162 56.2
Sopen01g037090 Solanum pennellii HOM05D004484 ORTHO05D005370 8.6e-45 184.1 162 56.2
BcaC07g37180 Brassica carinata HOM05D004484 ORTHO05D005370 1.9e-44 183.0 164 56.7
A08p05330 Brassica napus HOM05D004484 ORTHO05D005370 1.9e-44 183.0 164 56.7
AT1G48050 Arabidopsis thaliana HOM05D004484 ORTHO05D005370 2.5e-44 182.6 164 54.9
Aqoxy3G02138 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 4.3e-44 181.8 164 55.5
ECA234G1700 Erigeron canadensis HOM05D004484 ORTHO05D005370 4.3e-44 181.8 165 59.4
Lj9C569T11 Lonicera japonica HOM05D004484 ORTHO05D005370 4.3e-44 181.8 168 58.3
ATR0049G077 Amborella trichopoda HOM05D004484 ORTHO05D005370 1.6e-43 179.9 164 55.5
Aa31LG10G5650 Aethionema arabicum HOM05D004484 ORTHO05D005370 3.6e-43 178.7 164 57.3
Zm00001eb064930 Zea mays HOM05D004484 ORTHO05D005370 6.2e-43 177.9 164 57.9
HanXRQChr16g0520161 Helianthus annuus HOM05D004484 ORTHO05D005370 8.1e-43 177.6 165 55.2
GSVIVG01027609001 Vitis vinifera HOM05D004484 ORTHO05D005370 1.8e-42 176.4 166 56.6
Sabra14G0049400 Salix brachista HOM05D004484 ORTHO05D005370 4.0e-42 175.3 164 56.7
arahy.Tifrunner.gnm1.ann1.5492A7 Arachis hypogaea HOM05D004484 ORTHO05D005370 6.4e-40 167.9 156 63.5
unitig_749.g13780 Utricularia gibba HOM05D004484 ORTHO05D005370 1.1e-39 167.2 164 54.3
HPP92_027818 Vanilla planifolia HOM05D004484 ORTHO05D005370 1.4e-39 166.8 164 52.4
arahy.Tifrunner.gnm1.ann1.5WGS6V Arachis hypogaea HOM05D004484 ORTHO05D005370 2.1e-38 162.9 147 66.0
arahy.Tifrunner.gnm1.ann1.T9R8PC Arachis hypogaea HOM05D004484 ORTHO05D005370 7.8e-38 161.0 144 64.6
vmacro13399 Vaccinium macrocarpon HOM05D004484 ORTHO05D005370 2.3e-37 159.5 134 59.7
arahy.Tifrunner.gnm1.ann1.03ZR4A Arachis hypogaea HOM05D004484 ORTHO05D005370 5.1e-37 158.3 127 70.1
Lsat_1_v5_gn_4_43240 Lactuca sativa HOM05D004484 ORTHO05D005370 2.5e-36 156.0 164 53.7
Haze_16815 Corylus avellana HOM05D004484 ORTHO05D005370 4.3e-36 155.2 160 51.9
FAN03G1897 Fragaria x ananassa HOM05D004484 ORTHO05D005370 8.9e-34 147.5 164 50.0
AUR62013627 Chenopodium quinoa HOM05D004484 ORTHO05D005370 2.0e-33 146.4 126 59.5
PGR119G1536 Punica granatum HOM05D004484 ORTHO05D005370 3.2e-31 139.0 159 48.4
Thhalv10011351m.g Eutrema salsugineum HOM05D004484 ORTHO05D005370 9.3e-31 137.5 133 49.6
Glyma.06G243934 Glycine max HOM05D004484 ORTHO05D005370 6.6e-29 131.3 81 84.0
Pp3c22_11100 Physcomitrium patens HOM05D004484 ORTHO05D005370 1.1e-28 130.6 164 41.5
Glyma.06G244302 Glycine max HOM05D004484 ORTHO05D005370 7.3e-28 127.9 117 63.2
SMO367G0514 Selaginella moellendorffii HOM05D004484 ORTHO05D005370 1.6e-27 126.7 165 44.8
Mapoly0129s0012 Marchantia polymorpha HOM05D004484 ORTHO05D005370 1.2e-25 120.6 165 40.0
CBR_g30081 Chara braunii HOM05D004484 ORTHO05D005370 3.0e-21 105.9 168 37.5
SHI38094 Sapria himalayana HOM05D004484 ORTHO05D005370 3.3e-20 102.4 102 53.9
AagrBONN_evm.TU.Sc2ySwM_368.3373 Anthoceros agrestis HOM05D004484 ORTHO05D005370 1.3e-19 100.5 167 33.5
Hma1.2p1_0701F.1_g205850 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 7.6e-17 91.3 77 55.8
SHI38095 Sapria himalayana HOM05D004484 ORTHO05D005370 5.6e-12 75.1 54 63.0
Carub.0004s0917 Capsella rubella HOM05D004484 ORTHO05D005370 4.8e-11 72.0 92 43.5
Hma1.2p1_0086F.1_g044880 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 1.0e-08 64.3 39 74.4
MCO15G158 Micromonas commoda HOM05D004484 ORTHO05D005370 2.9e-08 62.8 149 30.2
CDE04G3156 Ceratophyllum demersum HOM05D004484 ORTHO05D005370 2.5e-07 59.7 41 65.9
SHI38996 Sapria himalayana HOM05D004484 ORTHO05D005370 1.6e-06 57.0 43 58.1


User provided reference genes

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