Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01035176001 Vitis vinifera HOM05D000810 ORTHO05D003737 1.2e-228 796.2 401 100.0
GSVIVG01029553001 Vitis vinifera HOM05D000810 ORTHO05D003737 3.7e-166 588.6 357 84.6
Dinv20332 Davidia involucrata HOM05D000810 ORTHO05D003737 5.6e-90 335.5 367 52.6
Atru.chr1.2653_Atru.chr1.2654 Acer truncatum HOM05D000810 ORTHO05D003737 4.2e-85 319.3 368 51.1
Prupe.3G023300 Prunus persica HOM05D000810 ORTHO05D003737 3.5e-84 316.2 355 49.9
QL05p088870 Quercus lobata HOM05D000810 ORTHO05D003737 6.0e-84 315.5 360 50.3
Haze_16184 Corylus avellana HOM05D000810 ORTHO05D003737 1.8e-83 313.9 356 50.0
Ciclev10030613m.g Citrus clementina HOM05D000810 ORTHO05D003737 2.8e-81 306.6 349 51.6
Nn8g40980 Nelumbo nucifera HOM05D000810 ORTHO05D003737 1.4e-80 304.3 368 48.9
Cfa003438 Carpinus fangiana HOM05D000810 ORTHO05D003737 6.9e-80 302.0 354 49.2
Manes.06G179701 Manihot esculenta HOM05D000810 ORTHO05D003737 9.0e-80 301.6 355 50.7
TAR636G3620 Trochodendron aralioides HOM05D000810 ORTHO05D003737 4.5e-79 299.3 364 49.7
Thecc.06G056100 Theobroma cacao HOM05D000810 ORTHO05D003737 9.3e-77 291.6 356 47.5
Actinidia38811 Actinidia chinensis HOM05D000810 ORTHO05D003737 1.2e-76 291.2 342 50.6
vmacro18740 Vaccinium macrocarpon HOM05D000810 ORTHO05D003737 2.7e-76 290.0 335 50.4
Cpa.g.sc176.3 Carica papaya HOM05D000810 ORTHO05D003737 4.6e-76 289.3 360 49.7
CSS0002363 Camellia sinensis var. sinensis HOM05D000810 ORTHO05D003737 1.8e-75 287.3 339 49.9
MD17G1161900 Malus domestica HOM05D000810 ORTHO05D003737 2.5e-74 283.5 362 44.5
MBI13_g31547_MAGBIO Magnolia biondii HOM05D000810 ORTHO05D003737 8.2e-73 278.5 364 46.7
Actinidia21890 Actinidia chinensis HOM05D000810 ORTHO05D003737 1.1e-72 278.1 342 48.5
CiPaw.01G208700 Carya illinoinensis HOM05D000810 ORTHO05D003737 2.4e-72 276.9 361 46.0
MD09G1165700 Malus domestica HOM05D000810 ORTHO05D003737 2.0e-71 273.9 352 44.9
Rhsim08G0250700 Rhododendron simsii HOM05D000810 ORTHO05D003737 3.2e-69 266.5 341 47.2
Aqoxy7G02728 Aquilegia oxysepala HOM05D000810 ORTHO05D003737 3.9e-67 259.6 368 44.0
COL.COLO4_31145 Corchorus olitorius HOM05D000810 ORTHO05D003737 3.9e-67 259.6 343 46.1
TWI12G0419 Tripterygium wilfordii HOM05D000810 ORTHO05D003737 6.7e-67 258.8 331 48.0
FAN02G1409 Fragaria x ananassa HOM05D000810 ORTHO05D003737 1.3e-65 254.6 341 42.5
PGR102G1419 Punica granatum HOM05D000810 ORTHO05D003737 2.8e-65 253.4 324 46.0
FvH4_6g36910 Fragaria vesca HOM05D000810 ORTHO05D003737 3.1e-64 250.0 331 44.1
FAN14G0087 Fragaria x ananassa HOM05D000810 ORTHO05D003737 3.1e-64 250.0 331 44.1
FAN09G0580 Fragaria x ananassa HOM05D000810 ORTHO05D003737 5.3e-64 249.2 341 42.2
RcHm_v2.0_Chr2g0149341 Rosa chinensis HOM05D000810 ORTHO05D003737 2.6e-63 246.9 353 42.8
Gohir.D02G114000 Gossypium hirsutum HOM05D000810 ORTHO05D003737 1.0e-62 245.0 346 44.5
Gohir.A03G088700 Gossypium hirsutum HOM05D000810 ORTHO05D003737 1.3e-62 244.6 346 44.8
Gorai.005G128800 Gossypium raimondii HOM05D000810 ORTHO05D003737 5.0e-62 242.7 346 44.2
Potri.008G004300 Populus trichocarpa HOM05D000810 ORTHO05D003737 1.1e-61 241.5 341 45.2
MBI16_g18212_MAGBIO Magnolia biondii HOM05D000810 ORTHO05D003737 4.6e-60 236.1 342 43.0
TWI75G0866 Tripterygium wilfordii HOM05D000810 ORTHO05D003737 6.1e-60 235.7 347 44.7
Dinv26444 Davidia involucrata HOM05D000810 ORTHO05D003737 2.3e-59 233.8 369 40.9
PSO079G0035 Papaver somniferum HOM05D000810 ORTHO05D003737 6.7e-59 232.3 355 42.8
GSVIVG01031557001 Vitis vinifera HOM05D000810 ORTHO05D003737 4.4e-58 229.6 340 41.2
PSO423G0285 Papaver somniferum HOM05D000810 ORTHO05D003737 2.8e-57 226.9 358 43.3
Cc04_g00050 Coffea canephora HOM05D000810 ORTHO05D003737 6.3e-57 225.7 359 41.2
Sabra08G0001900 Salix brachista HOM05D000810 ORTHO05D003737 8.2e-57 225.3 411 39.2
Manes.14G158384 Manihot esculenta HOM05D000810 ORTHO05D003737 6.9e-56 222.2 345 40.3
ClCG07G014670 Citrullus lanatus HOM05D000810 ORTHO05D003737 1.7e-54 217.6 355 39.2
MELO3C026713.2 Cucumis melo HOM05D000810 ORTHO05D003737 1.1e-53 214.9 350 39.4
Hma1.2p1_0517F.1_g170840 Hydrangea macrophylla HOM05D000810 ORTHO05D003737 2.5e-53 213.8 344 41.6
CsaV3_3G030470 Cucumis sativus L. HOM05D000810 ORTHO05D003737 3.2e-53 213.4 348 38.5
Peaxi162Scf00038g02643 Petunia axillaris HOM05D000810 ORTHO05D003737 7.2e-53 212.2 336 42.0
CiPaw.08G033900 Carya illinoinensis HOM05D000810 ORTHO05D003737 1.8e-51 207.6 340 39.4
Sed0026498 Sechium edule HOM05D000810 ORTHO05D003737 3.9e-51 206.5 365 36.7
PGSC0003DMG400009166 Solanum tuberosum HOM05D000810 ORTHO05D003737 3.9e-51 206.5 348 40.8
CANSAT01G1333 Cannabis sativa HOM05D000810 ORTHO05D003737 6.7e-51 205.7 355 38.9
TAR625G0247 Trochodendron aralioides HOM05D000810 ORTHO05D003737 2.0e-50 204.1 193 53.9
QL11p004807 Quercus lobata HOM05D000810 ORTHO05D003737 4.4e-50 203.0 325 39.7
Eucgr.F04032 Eucalyptus grandis HOM05D000810 ORTHO05D003737 9.7e-50 201.8 339 40.7
Dinv25403 Davidia involucrata HOM05D000810 ORTHO05D003737 1.7e-49 201.1 365 37.0
Lj8A573G8 Lonicera japonica HOM05D000810 ORTHO05D003737 3.7e-49 199.9 331 40.8
Cfa013430 Carpinus fangiana HOM05D000810 ORTHO05D003737 4.8e-49 199.5 354 38.4
Haze_21980 Corylus avellana HOM05D000810 ORTHO05D003737 1.4e-48 198.0 340 38.8
Potri.003G009900 Populus trichocarpa HOM05D000810 ORTHO05D003737 4.1e-48 196.4 336 37.8
CAN.G790.11 Capsicum annuum HOM05D000810 ORTHO05D003737 5.3e-48 196.1 355 39.4
Lj9A543G60 Lonicera japonica HOM05D000810 ORTHO05D003737 1.2e-47 194.9 351 40.2
Sopen03g041720 Solanum pennellii HOM05D000810 ORTHO05D003737 2.6e-47 193.7 359 39.8
Solyc03g123980.4 Solanum lycopersicum HOM05D000810 ORTHO05D003737 4.5e-47 193.0 359 39.8
Ciclev10007330m.g Citrus clementina HOM05D000810 ORTHO05D003737 5.0e-46 189.5 351 35.9
Oeu038102.1 Olea europaea HOM05D000810 ORTHO05D003737 2.1e-44 184.1 331 38.1
CiPaw.07G195000 Carya illinoinensis HOM05D000810 ORTHO05D003737 1.0e-43 181.8 330 37.9
Thecc.09G181000 Theobroma cacao HOM05D000810 ORTHO05D003737 2.3e-43 180.6 358 37.2
Lalb_Chr18g0052511 Lupinus albus HOM05D000810 ORTHO05D003737 3.0e-43 180.3 325 38.5
TWI63G0404 Tripterygium wilfordii HOM05D000810 ORTHO05D003737 3.0e-43 180.3 339 38.1
TPR.G9021 Trifolium pratense HOM05D000810 ORTHO05D003737 1.2e-42 178.3 321 36.1
Prupe.1G079300 Prunus persica HOM05D000810 ORTHO05D003737 2.0e-42 177.6 342 35.7
Glyma.09G057800 Glycine max HOM05D000810 ORTHO05D003737 3.7e-41 173.3 329 36.8
Glyma.15G163900 Glycine max HOM05D000810 ORTHO05D003737 8.2e-41 172.2 317 36.3
Duzib150G1381 Durio zibethinus HOM05D000810 ORTHO05D003737 1.1e-40 171.8 360 35.0
Ca_02041_v3 Cicer arietinum L. HOM05D000810 ORTHO05D003737 1.4e-40 171.4 331 36.6
Medtr2g036900 Medicago truncatula HOM05D000810 ORTHO05D003737 4.1e-40 169.9 331 37.5
Oeu049629.1 Olea europaea HOM05D000810 ORTHO05D003737 7.0e-40 169.1 312 38.8
Potri.006G165100 Populus trichocarpa HOM05D000810 ORTHO05D003737 1.6e-39 167.9 331 36.3
Lalb_Chr15g0084081 Lupinus albus HOM05D000810 ORTHO05D003737 2.0e-39 167.5 319 36.7
Psat1g145760 Pisum sativum HOM05D000810 ORTHO05D003737 2.7e-39 167.2 345 35.4
Lj6g0014025 Lotus japonicus HOM05D000810 ORTHO05D003737 3.5e-39 166.8 324 37.0
Phvul.009G237900 Phaseolus vulgaris HOM05D000810 ORTHO05D003737 1.7e-38 164.5 317 36.0
MD13G1245500 Malus domestica HOM05D000810 ORTHO05D003737 8.5e-38 162.2 367 33.2
THA.LOC104817845 Tarenaya hassleriana HOM05D000810 ORTHO05D003737 1.1e-37 161.8 331 36.9
CANSAT11G1792 Cannabis sativa HOM05D000810 ORTHO05D003737 9.4e-37 158.7 343 34.7
arahy.Tifrunner.gnm1.ann1.6TJY4I Arachis hypogaea HOM05D000810 ORTHO05D003737 1.6e-36 157.9 321 34.3
arahy.Tifrunner.gnm1.ann1.C9BI3G Arachis hypogaea HOM05D000810 ORTHO05D003737 2.7e-36 157.1 323 35.3
VMungo1309G1597 Vigna mungo HOM05D000810 ORTHO05D003737 8.0e-36 155.6 327 36.4
ATR0626G013 Amborella trichopoda HOM05D000810 ORTHO05D003737 1.4e-35 154.8 352 35.8
Hma1.2p1_0022F.1_g014710 Hydrangea macrophylla HOM05D000810 ORTHO05D003737 9.8e-34 148.7 349 32.7
HPP92_026148 Vanilla planifolia HOM05D000810 ORTHO05D003737 2.4e-32 144.1 360 33.3
MSTRG.10873 Avicennia marina HOM05D000810 ORTHO05D003737 3.1e-32 143.7 326 35.6
Lj4g0008073 Lotus japonicus HOM05D000810 ORTHO05D003737 1.6e-31 141.4 330 34.5
Atru.chr1.2648 Acer truncatum HOM05D000810 ORTHO05D003737 2.7e-31 140.6 125 59.2
Phvul.003G143000 Phaseolus vulgaris HOM05D000810 ORTHO05D003737 3.8e-30 136.7 332 36.1
Glyma.13G099300 Glycine max HOM05D000810 ORTHO05D003737 8.6e-30 135.6 319 36.4
SEGI_09065 Sequoiadendron giganteum HOM05D000810 ORTHO05D003737 2.1e-28 131.0 401 31.7
Migut.I01203 Erythranthe guttata HOM05D000810 ORTHO05D003737 1.4e-27 128.3 332 30.1
SGA_v2.0_scaffold122G33262 Striga asiatica HOM05D000810 ORTHO05D003737 2.3e-27 127.5 337 32.0
Oeu064536.1 Olea europaea HOM05D000810 ORTHO05D003737 3.0e-27 127.1 340 30.3
Sc12g0011200 Simmondsia chinensis HOM05D000810 ORTHO05D003737 3.0e-27 127.1 303 36.6
AT3G20250 Arabidopsis thaliana HOM05D000810 ORTHO05D003737 6.8e-27 125.9 338 32.5
Aa31LG8G7060 Aethionema arabicum HOM05D000810 ORTHO05D003737 4.9e-25 119.8 318 31.4
EL10Ac8g18318 Beta vulgaris HOM05D000810 ORTHO05D003737 1.8e-24 117.9 345 30.4
DCAR_028613 Daucus carota HOM05D000810 ORTHO05D003737 5.9e-23 112.8 309 29.8
MSTRG.19385 Avicennia marina HOM05D000810 ORTHO05D003737 7.8e-23 112.5 337 28.5
AL3G33950 Arabidopsis lyrata HOM05D000810 ORTHO05D003737 2.3e-22 110.9 342 30.7
Carub.0003s2018 Capsella rubella HOM05D000810 ORTHO05D003737 3.8e-22 110.2 333 31.5
AUR62021332 Chenopodium quinoa HOM05D000810 ORTHO05D003737 6.6e-22 109.4 324 30.9
AUR62033247 Chenopodium quinoa HOM05D000810 ORTHO05D003737 1.1e-21 108.6 181 40.3
Hund26319 Selenicereus undatus HOM05D000810 ORTHO05D003737 4.3e-21 106.7 249 33.3
A05p28730 Brassica napus HOM05D000810 ORTHO05D003737 1.2e-20 105.1 323 31.0
C05p44140 Brassica napus HOM05D000810 ORTHO05D003737 1.2e-20 105.1 324 31.2
Sc14g0001380 Simmondsia chinensis HOM05D000810 ORTHO05D003737 1.2e-20 105.1 340 30.6
BolC5t33136H Brassica oleracea HOM05D000810 ORTHO05D003737 2.8e-20 104.0 324 31.2
Sp3g18270 Schrenkiella parvula HOM05D000810 ORTHO05D003737 1.4e-19 101.7 330 30.0
Thhalv10020002m.g Eutrema salsugineum HOM05D000810 ORTHO05D003737 1.8e-19 101.3 331 29.6
VMungo1215G1751 Vigna mungo HOM05D000810 ORTHO05D003737 2.3e-19 100.9 337 32.3
Ah.14g083660 Amaranthus hybridus HOM05D000476 ORTHO05D004987 4.0e-19 100.1 340 28.5
FAN07G1793 Fragaria x ananassa HOM05D000810 ORTHO05D003737 5.2e-19 99.8 186 36.0
A05p28680 Brassica napus HOM05D000810 ORTHO05D003737 1.2e-18 98.6 297 30.6
Nitab4.5_0005664g0050 Nicotiana tabacum HOM05D000810 ORTHO05D003737 3.2e-16 90.5 147 42.9
BcaC05g28339 Brassica carinata HOM05D000810 ORTHO05D003737 9.2e-16 89.0 321 30.2
BraA05t21750Z Brassica rapa HOM05D000810 ORTHO05D003737 1.6e-15 88.2 185 37.3
AUR62025670 Chenopodium quinoa HOM05D000810 ORTHO05D003737 2.7e-15 87.4 178 32.6
AUR62001335 Chenopodium quinoa HOM05D000810 ORTHO05D003737 1.0e-14 85.5 178 34.3
Nitab4.5_0005739g0010 Nicotiana tabacum HOM05D000810 ORTHO05D003737 2.3e-14 84.3 144 41.7
THA.LOC104803051 Tarenaya hassleriana HOM05D000810 ORTHO05D003737 3.0e-14 84.0 276 29.7
Migut.J00818 Erythranthe guttata HOM05D000810 ORTHO05D003737 1.9e-13 81.3 199 31.7
C05p44080 Brassica napus HOM05D000810 ORTHO05D003737 2.5e-13 80.9 186 35.5
RcHm_v2.0_Chr4g0400221 Rosa chinensis HOM05D000810 ORTHO05D003737 5.6e-13 79.7 343 27.4
Zm00001eb174630 Zea mays HOM05D000810 ORTHO05D003737 7.3e-13 79.3 332 25.9
CARHR095860 Cardamine hirsuta HOM05D000810 ORTHO05D003737 9.5e-13 79.0 162 38.3
ECA240G3975 Erigeron canadensis HOM05D000810 ORTHO05D003737 1.2e-12 78.6 278 28.8
Pp3c8_3320 Physcomitrium patens HOM05D000810 ORTHO05D001064 2.1e-12 77.8 395 26.1
Pp3c8_3323 Physcomitrium patens HOM05D000810 ORTHO05D001064 2.1e-12 77.8 395 26.1
CARHR233350 Cardamine hirsuta HOM05D000810 ORTHO05D003737 2.8e-12 77.4 184 35.3
Lsat_1_v5_gn_8_69540 Lactuca sativa HOM05D000810 ORTHO05D003737 3.6e-12 77.0 124 38.7
EL10Ac7g18152 Beta vulgaris HOM05D000810 ORTHO05D003737 6.2e-12 76.3 174 33.3
Os08g0519800 Oryza sativa ssp. japonica HOM05D000810 ORTHO05D003737 8.0e-12 75.9 341 26.4
Thhalv10024383m.g Eutrema salsugineum HOM05D000810 ORTHO05D003737 1.1e-11 75.5 178 34.3
Mapoly0051s0008 Marchantia polymorpha HOM05D000810 ORTHO05D001064 1.1e-11 75.5 398 25.6
AT4G25880 Arabidopsis thaliana HOM05D000810 ORTHO05D003737 1.4e-11 75.1 228 32.0
FvH4_4g07600 Fragaria vesca HOM05D000810 ORTHO05D003737 8.9e-11 72.4 341 26.1
FAN12G2318 Fragaria x ananassa HOM05D000810 ORTHO05D003737 1.2e-10 72.0 194 28.4
Hund18592 Selenicereus undatus HOM05D000810 ORTHO05D003737 1.2e-10 72.0 306 28.4
AL7G27130 Arabidopsis lyrata HOM05D000810 ORTHO05D003737 2.6e-10 70.9 235 31.5
FAN22G1110 Fragaria x ananassa HOM05D000810 ORTHO05D003737 1.3e-09 68.6 196 28.1
HanXRQChr05g0140941 Helianthus annuus HOM05D000810 ORTHO05D003737 3.7e-09 67.0 164 32.9
Glyma.17G060766 Glycine max HOM05D000810 ORTHO05D003737 6.4e-09 66.2 230 32.6
HanXRQChr11g0340771 Helianthus annuus HOM05D000810 ORTHO05D003737 6.4e-09 66.2 132 33.3
Ah.08g217800 Amaranthus hybridus HOM05D000810 ORTHO05D003737 8.3e-09 65.9 148 29.7
A01p17140 Brassica napus HOM05D000810 ORTHO05D003737 1.1e-08 65.5 180 35.0
BraA01t01670Z Brassica rapa HOM05D000810 ORTHO05D003737 1.1e-08 65.5 180 35.0
C01p21470 Brassica napus HOM05D000810 ORTHO05D003737 4.1e-08 63.5 184 33.7
BolC1t02067H Brassica oleracea HOM05D000810 ORTHO05D003737 4.1e-08 63.5 184 33.7
Aa31LG3G270 Aethionema arabicum HOM05D000810 ORTHO05D003737 9.2e-08 62.4 137 34.3
FAN17G2966 Fragaria x ananassa HOM05D000810 ORTHO05D003737 9.2e-08 62.4 347 25.6
A03p41650 Brassica napus HOM05D000810 ORTHO05D003737 1.6e-07 61.6 253 29.2
BraA03t13317Z Brassica rapa HOM05D000810 ORTHO05D003737 1.6e-07 61.6 270 28.5
BraA05t21744Z Brassica rapa HOM05D000810 ORTHO05D003737 2.0e-07 61.2 268 25.7
Pp3c3_36740 Physcomitrium patens HOM05D000810 ORTHO05D001064 2.0e-07 61.2 400 24.2
Pp3c8_2770 Physcomitrium patens HOM05D000810 ORTHO05D001064 6.0e-07 59.7 109 31.2
Pp3c8_2780 Physcomitrium patens HOM05D000810 ORTHO05D001064 6.0e-07 59.7 109 31.2
Pp3c3_36940 Physcomitrium patens HOM05D000810 ORTHO05D001064 7.8e-07 59.3 419 23.6
Pp3c3_36952 Physcomitrium patens HOM05D000810 ORTHO05D001064 7.8e-07 59.3 419 23.6
Pp3c3_36960 Physcomitrium patens HOM05D000810 ORTHO05D001064 7.8e-07 59.3 419 23.6
Pp3c3_36976 Physcomitrium patens HOM05D000810 ORTHO05D001064 7.8e-07 59.3 419 23.6
CBR_g38449 Chara braunii HOM05D000810 ORTHO05D001064 1.7e-06 58.2 55 54.5
C03p51000 Brassica napus HOM05D000810 ORTHO05D003737 3.0e-06 57.4 197 28.9
BcaC01g03571 Brassica carinata HOM05D000810 ORTHO05D003737 5.0e-06 56.6 197 28.9
Lsat_1_v5_gn_7_56480 Lactuca sativa HOM05D000810 ORTHO05D003737 6.6e-06 56.2 158 30.4


User provided reference genes

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