Gene: Os08g0519800
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os08g0519800
- Transcript Identifier Os08t0519800-01
- Gene Type Coding gene
- Location chr08 : 25837795-25844099 : positive
Gene Family Information
- ID HOM05D000810
- #Genes/#Species 729/97
- Phylogenetic origin
- ID ORTHO05D003737
- #Genes/#Species 207/90
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Os08t0519800-01
- MSU-ID LOC_Os08g40830.2
- MSU-ID LOC_Os08g40830.1
- MSU-ID LOC_Os08g40830.3
- uniprot Q6YZW8
Descriptions
- Description Similar to Maternal pumilio protein. Splice isoform E.
- Description Pumilio RNA-binding repeat domain containing protein.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006417 | IEA | GOA Database | regulation of translation | |
| GO:0010608 | IBA | GOA Database | posttranscriptional regulation of gene expression | |
| GO:0061158 | ISO | PLAZA Integrative Orthology | 3'-UTR-mediated mRNA destabilization | AT3G20250 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT3G20250 |
| GO:0009819 | ISO | PLAZA Integrative Orthology | drought recovery | AT3G20250 |
| GO:0006970 | ISO | PLAZA Integrative Orthology | response to osmotic stress | AT3G20250 |
| GO:0051607 | ISO | PLAZA Integrative Orthology | defense response to virus | AT3G20250 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003729 | IBA | GOA Database | mRNA binding | |
| GO:0003727 | ISO | PLAZA Integrative Orthology | single-stranded RNA binding | AT3G20250 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IBA | GOA Database | cytoplasm | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G20250 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT3G20250 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |