Gene: PGR102G1419

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR102G1419
  • Transcript Identifier PGR102G1419.02
  • Gene Type Coding gene
  • Location NC_045129.1 : 12791580-12795995 : negative

Gene Family Information

  • ID HOM05D000810
  • #Genes/#Species 729/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031385962.1
  • name LOC116199647
  • name XM_031530102.1
  • id gene-LOC116199647
  • uniprot A0A218WAX4

Descriptions

  • product pumilio homolog 5, transcript variant X1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006417
IEA
GOA Databaseregulation of translation
GO:0061158
ISO
PLAZA Integrative Orthology3'-UTR-mediated mRNA destabilization AT3G20250
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT3G20250
GO:0009819
ISO
PLAZA Integrative Orthologydrought recovery AT3G20250
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT3G20250
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT3G20250

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003727
ISO
PLAZA Integrative Orthologysingle-stranded RNA binding AT3G20250
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G20250

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G20250
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT3G20250

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001313 Pumilio RNA-binding repeat
IPR016024 Armadillo-type fold
IPR011989 Armadillo-like helical
IPR012940 Nucleic acid binding NABP
IPR033712 Pumilio, RNA binding domain
Mapman id Description
35.1 not assigned.annotated