Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 0.0e+00 1228.8 624 100.0
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 1.2e-293 1012.7 628 80.7
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 5.2e-292 1007.3 628 81.4
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 9.1e-289 996.5 629 79.7
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 7.2e-286 986.9 662 76.7
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 6.1e-285 983.8 629 78.4
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 2.6e-283 978.4 627 79.6
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 4.4e-283 977.6 636 79.2
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 6.3e-282 973.8 603 81.1
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 3.1e-281 971.5 629 78.7
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 1.3e-279 966.1 627 77.7
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 4.7e-277 957.6 629 76.6
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 8.0e-277 956.8 627 76.4
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 2.3e-276 955.3 628 76.3
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 4.0e-276 954.5 628 76.8
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 1.3e-274 949.5 627 75.6
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 1.3e-274 949.5 626 77.2
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 4.9e-274 947.6 629 76.5
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 6.4e-274 947.2 629 77.1
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 4.1e-273 944.5 628 76.4
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 1.2e-272 943.0 628 75.6
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 3.5e-272 941.4 629 76.0
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 3.5e-272 941.4 629 76.5
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 6.6e-271 937.2 628 76.4
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 1.2e-269 932.9 720 68.2
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 1.2e-269 932.9 627 75.8
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 1.6e-269 932.6 605 77.4
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 6.8e-268 927.2 629 75.8
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 1.2e-267 926.4 626 75.1
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 1.5e-267 926.0 628 74.4
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 5.8e-267 924.1 628 76.0
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 1.7e-266 922.5 628 75.8
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 1.7e-266 922.5 627 74.0
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 2.2e-266 922.2 627 74.2
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 3.7e-266 921.4 626 74.0
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 4.9e-266 921.0 628 74.4
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.4e-265 919.5 628 74.2
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 7.0e-265 917.1 630 73.2
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 1.2e-264 916.4 630 73.5
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 3.3e-262 908.3 635 73.9
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 5.8e-259 897.5 629 73.3
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 3.7e-258 894.8 632 72.2
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 2.1e-256 889.0 630 71.1
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 1.6e-253 879.4 627 71.0
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 2.1e-253 879.0 627 71.9
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 1.8e-252 875.9 629 70.7
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 1.2e-251 873.2 626 70.8
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 9.9e-251 870.2 628 70.4
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 1.3e-250 869.8 626 70.8
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 3.8e-250 868.2 629 70.1
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 4.9e-250 867.8 627 69.7
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 6.4e-250 867.5 589 76.2
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 4.2e-249 864.8 629 70.9
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 1.6e-248 862.8 627 71.3
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 5.1e-247 857.8 627 68.7
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 3.3e-246 855.1 627 68.6
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 4.7e-245 851.3 627 68.4
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 1.1e-244 850.1 628 69.3
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 3.1e-244 848.6 627 68.1
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 9.0e-244 847.0 630 67.5
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 1.5e-243 846.3 626 67.9
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 3.8e-242 841.6 639 69.0
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 3.8e-242 841.6 640 69.1
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 4.9e-242 841.3 628 69.9
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 2.5e-238 828.9 636 69.3
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 8.1e-237 823.9 596 72.5
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 9.9e-235 817.0 642 66.0
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 3.8e-234 815.1 494 83.0
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 5.4e-233 811.2 630 66.0
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 6.7e-231 804.3 627 65.7
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 5.6e-230 801.2 626 69.0
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 6.2e-229 797.7 632 65.0
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 2.0e-227 792.7 610 67.4
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 2.0e-227 792.7 738 60.4
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 6.4e-226 787.7 639 65.9
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 7.1e-225 784.3 644 66.5
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 5.1e-223 778.1 628 65.4
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 1.2e-200 703.7 588 63.9
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 1.8e-199 699.9 625 62.4
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 6.7e-199 698.0 650 61.1
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 3.3e-198 695.7 644 59.9
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 4.7e-184 648.7 626 54.2
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 1.7e-173 613.6 427 74.2
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 1.6e-163 580.5 437 66.8
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 1.2e-160 570.9 566 52.5
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 8.9e-159 564.7 566 51.9
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 2.3e-151 540.0 635 47.2
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 1.2e-150 537.7 441 64.2
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 1.9e-145 520.4 569 52.2
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 1.9e-137 493.8 625 44.3
Atru.chr2.2053 Acer truncatum HOM05D006139 ORTHO05D007681 5.6e-137 492.3 307 79.8
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 8.1e-136 488.4 627 47.8
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 1.1e-135 488.0 625 44.2
PGSC0003DMG400014069 Solanum tuberosum HOM05D006139 ORTHO05D007681 1.1e-127 461.5 290 79.7
TPR.G8868 Trifolium pratense HOM05D006139 ORTHO05D007681 7.6e-118 428.7 285 74.4
TPR.G8879 Trifolium pratense HOM05D006139 ORTHO05D007681 9.9e-118 428.3 295 71.9
SHI27652 Sapria himalayana HOM05D006139 ORTHO05D007681 6.4e-117 425.6 360 62.8
Atru.chr2.2052 Acer truncatum HOM05D006139 ORTHO05D007681 1.4e-116 424.5 271 80.4
Ca_11423_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 4.2e-92 343.2 244 73.8
DCAR_005496 Daucus carota HOM05D006139 ORTHO05D007681 6.7e-90 335.9 232 73.7
TPR.G8907 Trifolium pratense HOM05D006139 ORTHO05D007681 1.5e-89 334.7 227 74.4
SEGI_35314 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 4.8e-88 329.7 272 63.6
DCAR_005495 Daucus carota HOM05D006139 ORTHO05D007681 6.5e-85 319.3 242 70.2
unitig_578.g15953 Utricularia gibba HOM05D006139 ORTHO05D007681 2.7e-67 260.8 239 59.0
Ah.03g143030 Amaranthus hybridus HOM05D006139 ORTHO05D007681 2.6e-65 254.2 185 71.4
Os07g0184900 Oryza sativa ssp. japonica HOM05D006139 ORTHO05D007681 1.6e-59 235.0 158 72.2
Cre13.g607500 Chlamydomonas reinhardtii HOM05D006139 ORTHO05D007681 1.4e-58 231.9 698 29.4
FAN22G0061 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.2e-56 224.6 165 70.3
unitig_578.g15954 Utricularia gibba HOM05D006139 ORTHO05D004041 2.8e-51 207.6 162 66.7
Ca_11425_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 5.2e-50 203.4 134 79.1
Hund20183 Selenicereus undatus HOM05D006139 ORTHO05D007681 3.4e-49 200.7 187 61.0
arahy.Tifrunner.gnm1.ann1.6RHH59 Arachis hypogaea HOM05D006139 ORTHO05D007681 1.2e-46 192.2 132 72.7
Cfa021664 Carpinus fangiana HOM05D006139 ORTHO05D007681 6.6e-45 186.4 603 28.5
CANSAT78G0600 Cannabis sativa HOM05D006139 ORTHO05D007681 7.0e-39 166.4 118 71.2
Ca_11424_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 6.8e-34 149.8 106 68.9
AUR62043732 Chenopodium quinoa HOM05D006139 ORTHO05D007681 2.8e-27 127.9 92 68.5
MCO14G338 Micromonas commoda HOM05D006139 ORTHO05D007681 4.7e-27 127.1 700 23.7
SEGI_31905 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 1.9e-20 105.1 73 60.3
BolC4t22161H Brassica oleracea HOM05D006139 ORTHO05D007681 4.7e-19 100.5 83 60.2
HanXRQChr13g0406711 Helianthus annuus HOM05D006139 ORTHO05D007681 1.5e-17 95.5 57 78.9
Ah.03g143010 Amaranthus hybridus HOM05D006139 ORTHO05D007681 2.6e-17 94.7 125 47.2
CARHR154100 Cardamine hirsuta HOM05D006139 ORTHO05D007681 3.8e-16 90.9 66 66.7
Potri.006G132501 Populus trichocarpa HOM05D006139 ORTHO05D007681 3.8e-16 90.9 77 66.2
vmacro12608 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 4.2e-15 87.4 64 71.9
Zm00001eb114470 Zea mays HOM05D006139 ORTHO05D007681 5.6e-12 77.0 65 61.5
SEGI_11325 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 3.1e-10 71.2 77 48.1
Dinv25612 Davidia involucrata HOM05D000447 ORTHO05D007681 9.0e-10 69.7 123 40.7
Eucgr.L02132 Eucalyptus grandis HOM05D006139 ORTHO05D007681 2.2e-08 65.1 44 75.0


User provided reference genes

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