Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01007685001 Vitis vinifera HOM05D004842 ORTHO05D005929 5.5e-247 857.4 515 100.0
CSS0028462 Camellia sinensis var. sinensis HOM05D004842 ORTHO05D005929 1.4e-237 826.2 513 95.9
Dinv33198 Davidia involucrata HOM05D004842 ORTHO05D005929 4.3e-236 821.2 513 95.9
Hma1.2p1_0150F.1_g066770 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 6.3e-235 817.4 513 90.6
Nn1g01353 Nelumbo nucifera HOM05D004842 ORTHO05D005929 7.7e-233 810.4 513 95.1
Actinidia01552 Actinidia chinensis HOM05D004842 ORTHO05D005929 8.5e-232 807.0 513 94.0
Lj9C410G7 Lonicera japonica HOM05D004842 ORTHO05D005929 1.4e-231 806.2 513 94.9
TAR374G0778 Trochodendron aralioides HOM05D004842 ORTHO05D005929 3.2e-231 805.1 513 93.6
Cc10_g16460 Coffea canephora HOM05D004842 ORTHO05D005929 4.2e-231 804.7 515 93.2
Aqoxy7G00451 Aquilegia oxysepala HOM05D004842 ORTHO05D005929 9.4e-231 803.5 511 94.7
Cfa008117 Carpinus fangiana HOM05D004842 ORTHO05D005929 9.4e-231 803.5 513 93.6
HanXRQChr15g0492161 Helianthus annuus HOM05D004842 ORTHO05D005929 1.0e-229 800.0 513 92.0
Cpa.g.sc20.22 Carica papaya HOM05D004842 ORTHO05D005929 1.4e-229 799.7 512 92.4
CiPaw.03G017600 Carya illinoinensis HOM05D004842 ORTHO05D005929 1.4e-229 799.7 513 94.0
CDE03G0432 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 2.3e-229 798.9 513 93.2
CsaV3_2G033060 Cucumis sativus L. HOM05D004842 ORTHO05D005929 2.3e-229 798.9 513 88.1
HanXRQChr04g0123031 Helianthus annuus HOM05D004842 ORTHO05D005929 2.3e-229 798.9 513 91.8
Potri.011G156900 Populus trichocarpa HOM05D004842 ORTHO05D005929 6.7e-229 797.3 511 92.4
CDE04G2825 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 8.8e-229 797.0 513 93.2
Phvul.002G251300 Phaseolus vulgaris HOM05D004842 ORTHO05D005929 8.8e-229 797.0 513 92.6
Lsat_1_v5_gn_0_10701 Lactuca sativa HOM05D004842 ORTHO05D005929 1.1e-228 796.6 513 92.8
Prupe.1G547900 Prunus persica HOM05D004842 ORTHO05D005929 1.1e-228 796.6 513 92.6
Eucgr.E01768 Eucalyptus grandis HOM05D004842 ORTHO05D005929 1.5e-228 796.2 511 93.9
PGR031G3502 Punica granatum HOM05D004842 ORTHO05D005929 1.5e-228 796.2 511 89.2
Sabra11G0143100 Salix brachista HOM05D004842 ORTHO05D005929 1.5e-228 796.2 511 92.4
Glyma.08G128700 Glycine max HOM05D004842 ORTHO05D005929 2.6e-228 795.4 513 92.6
Ca_21945_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 4.4e-228 794.7 513 92.2
DCAR_005757 Daucus carota HOM05D004842 ORTHO05D005929 5.7e-228 794.3 513 93.0
Gohir.A13G118200 Gossypium hirsutum HOM05D004842 ORTHO05D005929 5.7e-228 794.3 510 90.0
CANSAT25G2510 Cannabis sativa HOM05D004842 ORTHO05D005929 7.4e-228 793.9 513 91.4
ClCG11G008790 Citrullus lanatus HOM05D004842 ORTHO05D005929 7.4e-228 793.9 509 87.8
PGSC0003DMG400005186 Solanum tuberosum HOM05D004842 ORTHO05D005929 7.4e-228 793.9 515 91.5
TWI14G0987 Tripterygium wilfordii HOM05D004842 ORTHO05D005929 2.2e-227 792.3 512 92.6
Sopen06g023340 Solanum pennellii HOM05D004842 ORTHO05D005929 2.8e-227 792.0 515 91.3
MSTRG.25488 Avicennia marina HOM05D004842 ORTHO05D005929 3.7e-227 791.6 515 92.2
Thecc.08G195800 Theobroma cacao HOM05D004842 ORTHO05D005929 3.7e-227 791.6 510 89.0
Atru.chr13.2273 Acer truncatum HOM05D004842 ORTHO05D005929 4.8e-227 791.2 512 92.6
MSTRG.1576 Avicennia marina HOM05D004842 ORTHO05D005929 4.8e-227 791.2 515 90.7
ECA232G0634 Erigeron canadensis HOM05D004842 ORTHO05D005929 4.8e-227 791.2 513 90.6
Gohir.D13G122000 Gossypium hirsutum HOM05D004842 ORTHO05D005929 8.2e-227 790.4 510 92.4
Solyc06g064830.3 Solanum lycopersicum HOM05D004842 ORTHO05D005929 8.2e-227 790.4 515 91.1
Duzib177G0537 Durio zibethinus HOM05D004842 ORTHO05D005929 2.4e-226 788.9 510 88.4
Lj6g0012354 Lotus japonicus HOM05D004842 ORTHO05D005929 3.1e-226 788.5 513 91.4
Hund07225 Selenicereus undatus HOM05D004842 ORTHO05D005929 3.1e-226 788.5 513 92.4
Migut.C01340 Erythranthe guttata HOM05D004842 ORTHO05D005929 5.3e-226 787.7 515 92.4
Lalb_Chr11g0075451 Lupinus albus HOM05D004842 ORTHO05D005929 5.3e-226 787.7 515 91.3
THA.LOC104813908 Tarenaya hassleriana HOM05D004842 ORTHO05D005929 1.2e-225 786.6 512 92.2
Psat5g178560 Pisum sativum HOM05D004842 ORTHO05D005929 2.0e-225 785.8 513 91.2
Gorai.013G136700 Gossypium raimondii HOM05D004842 ORTHO05D005929 4.5e-225 784.6 510 92.0
Sed0014706 Sechium edule HOM05D004842 ORTHO05D005929 4.5e-225 784.6 513 87.3
MD08G1215900 Malus domestica HOM05D004842 ORTHO05D005929 3.8e-224 781.6 513 89.7
SalBow8G3404 Salvia bowleyana HOM05D004842 ORTHO05D005929 5.0e-224 781.2 538 87.7
VMungo0251G2201 Vigna mungo HOM05D004842 ORTHO05D005929 5.0e-224 781.2 504 92.3
AUR62006879 Chenopodium quinoa HOM05D004842 ORTHO05D005929 2.5e-223 778.9 513 85.8
PSO478G2485 Papaver somniferum HOM05D004842 ORTHO05D005929 5.5e-223 777.7 513 91.4
PSO782G1233 Papaver somniferum HOM05D004842 ORTHO05D005929 7.2e-223 777.3 513 91.2
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 9.4e-223 776.9 513 90.4
ATR0757G167 Amborella trichopoda HOM05D004842 ORTHO05D005929 1.6e-222 776.2 513 92.0
Nitab4.5_0006477g0030 Nicotiana tabacum HOM05D004842 ORTHO05D005929 6.1e-222 774.2 504 92.1
SGA_v2.0_scaffold24G10617 Striga asiatica HOM05D004842 ORTHO05D005929 8.0e-222 773.9 527 80.5
Aa31LG7G3010 Aethionema arabicum HOM05D004842 ORTHO05D005929 1.0e-221 773.5 511 90.6
Medtr3g052220 Medicago truncatula HOM05D004842 ORTHO05D005929 1.0e-221 773.5 513 88.3
Glyma.05G170500 Glycine max HOM05D004842 ORTHO05D005929 1.8e-221 772.7 513 91.0
Thhalv10018372m.g Eutrema salsugineum HOM05D004842 ORTHO05D005929 2.3e-221 772.3 515 88.0
Rhsim12G0003800 Rhododendron simsii HOM05D004842 ORTHO05D005929 3.0e-221 771.9 504 90.1
SHI07326 Sapria himalayana HOM05D004842 ORTHO05D005929 1.1e-220 770.0 515 89.3
QL09p004408 Quercus lobata HOM05D004842 ORTHO05D005929 2.0e-220 769.2 512 86.3
Ciclev10010841m.g Citrus clementina HOM05D004842 ORTHO05D005929 4.4e-220 768.1 512 91.4
Sp5g28910 Schrenkiella parvula HOM05D004842 ORTHO05D005929 5.7e-220 767.7 511 85.1
COL.COLO4_26800 Corchorus olitorius HOM05D004842 ORTHO05D005929 2.2e-219 765.8 535 83.9
MD15G1400300 Malus domestica HOM05D004842 ORTHO05D005929 6.3e-219 764.2 513 90.4
SGA_v2.0_scaffold118G32576 Striga asiatica HOM05D004842 ORTHO05D005929 1.1e-218 763.5 504 90.5
Os01g0322800 Oryza sativa ssp. japonica HOM05D004842 ORTHO05D005929 2.4e-218 762.3 514 87.7
RcHm_v2.0_Chr7g0230731 Rosa chinensis HOM05D004842 ORTHO05D005929 4.1e-218 761.5 513 85.0
BcaB03g15725 Brassica carinata HOM05D004842 ORTHO05D005929 1.3e-216 756.5 511 83.8
CARHR066790 Cardamine hirsuta HOM05D004842 ORTHO05D005929 5.0e-216 754.6 511 82.8
Carub.0002s2047 Capsella rubella HOM05D004842 ORTHO05D005929 1.5e-215 753.1 511 85.5
FvH4_5g32860 Fragaria vesca HOM05D004842 ORTHO05D005929 1.9e-215 752.7 513 83.8
FAN18G3613 Fragaria x ananassa HOM05D004842 ORTHO05D005929 1.9e-215 752.7 513 83.8
MBI04_g37683_MAGBIO Magnolia biondii HOM05D004842 ORTHO05D005929 4.2e-215 751.5 515 87.8
arahy.Tifrunner.gnm1.ann1.907RVD Arachis hypogaea HOM05D004842 ORTHO05D005929 1.6e-214 749.6 513 89.1
A07p39580 Brassica napus HOM05D004842 ORTHO05D005929 1.8e-213 746.1 511 85.9
C06p47870 Brassica napus HOM05D004842 ORTHO05D005929 1.5e-212 743.0 509 85.9
BolC6t39822H Brassica oleracea HOM05D004842 ORTHO05D005929 1.5e-212 743.0 509 85.9
BcaB03g15078 Brassica carinata HOM05D004842 ORTHO05D005929 3.3e-212 741.9 511 85.5
FAN04G0777 Fragaria x ananassa HOM05D004842 ORTHO05D005929 2.2e-211 739.2 541 79.7
Mapoly0044s0021 Marchantia polymorpha HOM05D004842 ORTHO05D005929 2.8e-211 738.8 513 85.8
Dinv07060 Davidia involucrata HOM05D004842 ORTHO05D005929 1.8e-210 736.1 513 78.2
AL2G33520 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 3.1e-210 735.3 500 86.0
Nitab4.5_0001799g0050 Nicotiana tabacum HOM05D004842 ORTHO05D005929 4.1e-210 734.9 511 88.8
Nitab4.5_0006564g0010 Nicotiana tabacum HOM05D004842 ORTHO05D005929 3.5e-209 731.9 485 91.1
FAN08G0446 Fragaria x ananassa HOM05D004842 ORTHO05D005929 6.5e-208 727.6 513 82.5
unitig_748.g7731 Utricularia gibba HOM05D004842 ORTHO05D005929 4.0e-205 718.4 553 73.8
AUR62000532 Chenopodium quinoa HOM05D004842 ORTHO05D005929 6.8e-205 717.6 513 77.6
BraA07t31507Z Brassica rapa HOM05D004842 ORTHO05D005929 1.2e-204 716.8 520 82.9
AagrBONN_evm.TU.Sc2ySwM_369.510 Anthoceros agrestis HOM05D004842 ORTHO05D005929 5.7e-204 714.5 556 78.6
AT1G73720 Arabidopsis thaliana HOM05D004842 ORTHO05D005929 2.8e-203 712.2 511 85.1
arahy.Tifrunner.gnm1.ann1.VU3SB5 Arachis hypogaea HOM05D004842 ORTHO05D005929 1.6e-201 706.4 534 80.5
Pp3c7_2610 Physcomitrium patens HOM05D004842 ORTHO05D005929 5.9e-201 704.5 513 82.7
TAR375G0910 Trochodendron aralioides HOM05D004842 ORTHO05D005929 1.3e-200 703.4 463 95.0
Pp3c11_23660 Physcomitrium patens HOM05D004842 ORTHO05D005929 2.3e-200 702.6 513 80.3
Peaxi162Scf00688g00227 Petunia axillaris HOM05D004842 ORTHO05D005929 3.0e-197 692.2 484 87.4
Sc20g0002260 Simmondsia chinensis HOM05D004842 ORTHO05D005929 2.2e-195 686.0 467 90.6
CBR_g5735 Chara braunii HOM05D004842 ORTHO05D005929 8.3e-195 684.1 513 80.5
CANSAT21G1785 Cannabis sativa HOM05D004842 ORTHO05D005929 4.1e-194 681.8 524 81.5
SMO119G0417 Selaginella moellendorffii HOM05D004842 ORTHO05D005929 1.7e-192 676.4 511 73.6
Nitab4.5_0000748g0110 Nicotiana tabacum HOM05D004842 ORTHO05D005929 1.2e-190 670.2 515 83.7
vmacro00929 Vaccinium macrocarpon HOM05D004842 ORTHO05D005929 2.8e-182 642.5 435 88.5
Manes.01G021200 Manihot esculenta HOM05D004842 ORTHO05D005929 6.2e-182 641.3 430 93.0
COL.COLO4_24626 Corchorus olitorius HOM05D004842 ORTHO05D005929 1.1e-178 630.6 428 90.2
BcaC08g46793 Brassica carinata HOM05D004842 ORTHO05D005929 8.7e-160 567.8 518 67.6
SEGI_07677 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 4.7e-158 562.0 414 86.2
Cre01.g020400 Chlamydomonas reinhardtii HOM05D004842 ORTHO05D005929 1.9e-154 550.1 511 67.5
EL10Ac4g09640 Beta vulgaris HOM05D004842 ORTHO05D005929 9.6e-143 511.1 272 93.0
TPR.G33753 Trifolium pratense HOM05D004842 ORTHO05D005929 7.6e-132 474.9 253 93.3
Hma1.2p1_1698F.1_g298123 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 2.5e-127 459.9 322 87.0
Zm00001eb130810 Zea mays HOM05D004842 ORTHO05D005929 1.0e-120 438.0 313 78.9
EL10Ac4g09644 Beta vulgaris HOM05D004842 ORTHO05D005929 2.6e-116 423.3 388 61.9
arahy.Tifrunner.gnm1.ann1.6AWP8P Arachis hypogaea HOM05D004842 ORTHO05D005929 1.9e-106 390.6 209 94.7
arahy.Tifrunner.gnm1.ann1.UIX0GM Arachis hypogaea HOM05D004842 ORTHO05D005929 4.2e-106 389.4 209 94.3
Lj9C233G3 Lonicera japonica HOM05D004842 ORTHO05D005929 3.7e-94 349.7 365 75.3
Actinidia15960 Actinidia chinensis HOM05D004842 ORTHO05D005929 1.0e-80 305.1 257 82.9
PRCOL_00002301 Prasinoderma coloniale HOM05D004842 ORTHO05D005929 1.9e-74 284.3 528 48.7
EL10Ac4g09638 Beta vulgaris HOM05D004842 ORTHO05D005929 3.3e-66 256.9 175 85.1
Haze_13915 Corylus avellana HOM05D004842 ORTHO05D005929 9.8e-63 245.4 133 94.0
C06p33880 Brassica napus HOM05D004842 ORTHO05D005929 4.1e-61 240.0 526 34.8
PSO384G0554 Papaver somniferum HOM05D004842 ORTHO05D005929 2.7e-44 184.1 99 85.9
Ca_03946_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 1.9e-42 177.9 108 76.9
Haze_27333 Corylus avellana HOM05D004842 ORTHO05D005929 2.8e-41 174.1 254 40.6
Cpa.g.c40110 Carica papaya HOM05D004842 ORTHO05D005929 1.7e-38 164.9 80 96.2
SEGI_19922 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 2.5e-34 151.0 79 94.9
Sabra16G0312200 Salix brachista HOM05D004842 ORTHO05D005929 2.1e-33 147.9 178 52.2
BolC2t07949H Brassica oleracea HOM05D004842 ORTHO05D005929 3.1e-32 144.1 137 62.0
RcHm_v2.0_Chr6g0269341 Rosa chinensis HOM05D004842 ORTHO05D005929 6.9e-32 142.9 107 72.0
AL6G46370 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 7.6e-31 139.4 294 31.3
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 1.3e-27 128.6 70 87.1
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 7.4e-26 122.9 69 84.1
C05p58610 Brassica napus HOM05D004842 ORTHO05D009094 8.1e-25 119.4 64 84.4
BolC4t22950H Brassica oleracea HOM05D004842 ORTHO05D005929 8.1e-25 119.4 64 84.4
Duzib211G0352 Durio zibethinus HOM05D004842 ORTHO05D005929 9.3e-21 105.9 56 83.9
Glyma.04G106300 Glycine max HOM05D004842 ORTHO05D005929 7.9e-20 102.8 74 67.6
Glyma.04G149500 Glycine max HOM05D004842 ORTHO05D005929 7.9e-20 102.8 74 67.6
BolC6t38501H Brassica oleracea HOM05D004842 ORTHO05D005929 3.0e-19 100.9 56 76.8
TPR.G15252 Trifolium pratense HOM05D004842 ORTHO05D005929 3.9e-19 100.5 50 84.0
Actinidia15959 Actinidia chinensis HOM05D004842 ORTHO05D005929 1.1e-16 92.4 47 97.9
ECA238G3245 Erigeron canadensis HOM05D000757 ORTHO05D000622 3.1e-16 90.9 44 88.6
Actinidia15961 Actinidia chinensis HOM05D004842 ORTHO05D005929 4.5e-15 87.0 126 42.1
ECA248G1356 Erigeron canadensis HOM05D006056 ORTHO05D007136 5.8e-15 86.7 44 84.1
TPR.G33759 Trifolium pratense HOM05D004842 ORTHO05D005929 1.1e-13 82.4 134 76.1
Sed0018019 Sechium edule HOM05D004842 ORTHO05D005929 5.5e-13 80.1 105 46.7
Cfa012955 Carpinus fangiana HOM05D002874 ORTHO05D003250 3.0e-11 74.3 36 86.1
Oeu002300.1 Olea europaea HOM05D004842 ORTHO05D005929 1.2e-07 62.4 60 56.7
C04p47590 Brassica napus HOM05D007212 ORTHO05D009094 1.0e-06 59.3 35 71.4
TPR.G36494 Trifolium pratense HOM05D009291 ORTHO05D010716 1.3e-06 58.9 29 82.8
Actinidia23032 Actinidia chinensis HOM05D004842 ORTHO05D008384 2.2e-06 58.2 74 52.7
Lsat_1_v5_gn_3_52840 Lactuca sativa HOM05D004842 ORTHO05D005929 3.8e-06 57.4 35 71.4


User provided reference genes

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