Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G1436 Fragaria x ananassa HOM05D005175 ORTHO05D006302 3.4e-61 238.0 112 100.0
FAN15G2140 Fragaria x ananassa HOM05D005175 ORTHO05D006302 1.8e-41 172.6 124 71.0
FvH4_2g35660 Fragaria vesca HOM05D005175 ORTHO05D006302 1.7e-39 166.0 115 70.4
RcHm_v2.0_Chr6g0306141 Rosa chinensis HOM05D005175 ORTHO05D006302 2.8e-39 165.2 115 70.4
Prupe.1G449000 Prunus persica HOM05D005175 ORTHO05D006302 8.2e-39 163.7 115 68.7
FAN20G1449 Fragaria x ananassa HOM05D005175 ORTHO05D006302 1.1e-38 163.3 115 70.4
MD01G1039900 Malus domestica HOM05D005175 ORTHO05D006302 2.6e-37 158.7 115 67.8
Dinv14260 Davidia involucrata HOM05D005175 ORTHO05D006302 1.0e-36 156.8 115 67.8
Hma1.2p1_0049F.1_g028670 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 1.3e-36 156.4 115 66.1
Hma1.2p1_0049F.1_g028680 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 1.3e-36 156.4 115 66.1
QL12p029089 Quercus lobata HOM05D005175 ORTHO05D006302 5.0e-36 154.5 117 65.0
CANSAT11G2394 Cannabis sativa HOM05D005175 ORTHO05D006302 6.5e-36 154.1 115 66.1
CSS0003070 Camellia sinensis var. sinensis HOM05D005175 ORTHO05D006302 1.1e-35 153.3 115 63.5
CSS0010535 Camellia sinensis var. sinensis HOM05D005175 ORTHO05D006302 1.1e-35 153.3 115 63.5
Lj8C577G3 Lonicera japonica HOM05D005175 ORTHO05D006302 1.1e-35 153.3 117 66.7
Lj8C586G3 Lonicera japonica HOM05D005175 ORTHO05D006302 1.1e-35 153.3 117 66.7
Atru.chr7.2095 Acer truncatum HOM05D005175 ORTHO05D006302 1.9e-35 152.5 115 65.2
Atru.chr7.2109 Acer truncatum HOM05D005175 ORTHO05D006302 1.9e-35 152.5 115 65.2
Duzib150G1530 Durio zibethinus HOM05D005175 ORTHO05D006302 1.9e-35 152.5 115 65.2
Rhsim02G0179100 Rhododendron simsii HOM05D005175 ORTHO05D006302 1.9e-35 152.5 115 64.3
Lsat_1_v5_gn_1_47181 Lactuca sativa HOM05D005175 ORTHO05D006302 2.5e-35 152.1 115 63.5
MD15G1311800 Malus domestica HOM05D005175 ORTHO05D006302 2.5e-35 152.1 115 64.3
Cfa013314 Carpinus fangiana HOM05D005175 ORTHO05D006302 3.2e-35 151.8 115 64.3
CiPaw.11G052500 Carya illinoinensis HOM05D005175 ORTHO05D006302 4.2e-35 151.4 115 63.5
Manes.01G107300 Manihot esculenta HOM05D005175 ORTHO05D006302 5.5e-35 151.0 115 64.3
Sopen08g020660 Solanum pennellii HOM05D005175 ORTHO05D006302 9.4e-35 150.2 116 65.5
HanXRQChr01g0029811 Helianthus annuus HOM05D005175 ORTHO05D006302 1.2e-34 149.8 115 64.3
Solyc08g066700.3 Solanum lycopersicum HOM05D005175 ORTHO05D006302 1.2e-34 149.8 115 65.2
Gohir.A13G186200 Gossypium hirsutum HOM05D005175 ORTHO05D006302 1.6e-34 149.4 115 64.3
Thecc.09G044300 Theobroma cacao HOM05D005175 ORTHO05D006302 1.6e-34 149.4 115 64.3
Gohir.D13G193000 Gossypium hirsutum HOM05D005175 ORTHO05D006302 2.1e-34 149.1 115 63.5
Gorai.013G218900 Gossypium raimondii HOM05D005175 ORTHO05D006302 2.1e-34 149.1 115 63.5
PGSC0003DMG400004310 Solanum tuberosum HOM05D005175 ORTHO05D006302 2.1e-34 149.1 115 64.3
Cc08_g09460 Coffea canephora HOM05D005175 ORTHO05D006302 2.7e-34 148.7 115 64.3
CAN.G1674.2 Capsicum annuum HOM05D005175 ORTHO05D006302 3.6e-34 148.3 115 64.3
MBI04_g27064_MAGBIO Magnolia biondii HOM05D005175 ORTHO05D006302 3.6e-34 148.3 115 62.6
TAR626G1708 Trochodendron aralioides HOM05D005175 ORTHO05D006302 4.7e-34 147.9 115 63.5
TAR636G0460 Trochodendron aralioides HOM05D005175 ORTHO05D006302 4.7e-34 147.9 115 63.5
GSVIVG01035631001 Vitis vinifera HOM05D005175 ORTHO05D006302 4.7e-34 147.9 115 65.2
Hma1.2p1_0184F.1_g081320 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 6.1e-34 147.5 77 85.7
Potri.018G043600 Populus trichocarpa HOM05D005175 ORTHO05D006302 6.1e-34 147.5 115 64.3
Sed0006550 Sechium edule HOM05D005175 ORTHO05D006302 6.1e-34 147.5 115 65.2
MELO3C011145.2 Cucumis melo HOM05D005175 ORTHO05D006302 7.9e-34 147.1 115 65.2
CsaV3_2G030910 Cucumis sativus L. HOM05D005175 ORTHO05D006302 7.9e-34 147.1 115 65.2
Hma1.2p1_0774F.1_g216370 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 7.9e-34 147.1 75 88.0
Peaxi162Scf00227g00213 Petunia axillaris HOM05D005175 ORTHO05D006302 7.9e-34 147.1 113 62.8
PGR044G2490 Punica granatum HOM05D005175 ORTHO05D006302 7.9e-34 147.1 118 62.7
Thhalv10002689m.g Eutrema salsugineum HOM05D005175 ORTHO05D006302 1.0e-33 146.7 115 62.6
AUR62043392 Chenopodium quinoa HOM05D005175 ORTHO05D006302 1.4e-33 146.4 103 70.9
ClCG08G012270 Citrullus lanatus HOM05D005175 ORTHO05D006302 1.4e-33 146.4 115 65.2
ECA248G2598 Erigeron canadensis HOM05D005175 ORTHO05D006302 1.8e-33 146.0 115 61.7
Sabra18G0043700 Salix brachista HOM05D005175 ORTHO05D006302 1.8e-33 146.0 115 63.5
EL10Ac2g04031 Beta vulgaris HOM05D005175 ORTHO05D006302 2.3e-33 145.6 115 62.6
Thhalv10002814m.g Eutrema salsugineum HOM05D005175 ORTHO05D006302 2.3e-33 145.6 115 61.7
AL5G25000 Arabidopsis lyrata HOM05D005175 ORTHO05D006302 3.0e-33 145.2 115 62.6
CARHR154650 Cardamine hirsuta HOM05D005175 ORTHO05D006302 3.0e-33 145.2 115 61.7
Eucgr.C02924 Eucalyptus grandis HOM05D005175 ORTHO05D006302 3.0e-33 145.2 115 61.7
PSO782G3154 Papaver somniferum HOM05D005175 ORTHO05D006302 3.0e-33 145.2 115 63.5
Carub.0005s1205 Capsella rubella HOM05D005175 ORTHO05D006302 3.9e-33 144.8 115 61.7
AUR62009295 Chenopodium quinoa HOM05D005175 ORTHO05D006302 3.9e-33 144.8 103 70.9
Nitab4.5_0007810g0010 Nicotiana tabacum HOM05D005175 ORTHO05D006302 3.9e-33 144.8 75 89.3
Nitab4.5_0007838g0040 Nicotiana tabacum HOM05D005175 ORTHO05D006302 3.9e-33 144.8 75 89.3
PSO566G0264 Papaver somniferum HOM05D005175 ORTHO05D006302 5.1e-33 144.4 115 63.5
vmacro11061 Vaccinium macrocarpon HOM05D005175 ORTHO05D006302 5.1e-33 144.4 75 86.7
THA.LOC104814772 Tarenaya hassleriana HOM05D005175 ORTHO05D006302 6.7e-33 144.1 115 60.0
AT3G46210 Arabidopsis thaliana HOM05D005175 ORTHO05D006302 8.8e-33 143.7 115 61.7
BcaC01g01925 Brassica carinata HOM05D005175 ORTHO05D006302 8.8e-33 143.7 115 60.9
DCAR_004475 Daucus carota HOM05D005175 ORTHO05D006302 8.8e-33 143.7 75 88.0
Nn7g37002 Nelumbo nucifera HOM05D005175 ORTHO05D006302 8.8e-33 143.7 115 62.6
Sp5g15420 Schrenkiella parvula HOM05D005175 ORTHO05D006302 8.8e-33 143.7 115 60.9
BolC3t19335H Brassica oleracea HOM05D005175 ORTHO05D006302 4.4e-32 141.4 75 84.0
Duzib168G0626 Durio zibethinus HOM05D005175 ORTHO05D006302 4.4e-32 141.4 115 61.7
Sc09g0009230 Simmondsia chinensis HOM05D005175 ORTHO05D006302 4.4e-32 141.4 115 60.9
Ciclev10009310m.g Citrus clementina HOM05D005175 ORTHO05D006302 5.7e-32 141.0 115 60.0
COL.COLO4_17864 Corchorus olitorius HOM05D005175 ORTHO05D006302 5.7e-32 141.0 74 85.1
Lj2g0027256 Lotus japonicus HOM05D005175 ORTHO05D006302 5.7e-32 141.0 116 62.1
C03p70530 Brassica napus HOM05D005175 ORTHO05D006302 7.4e-32 140.6 74 85.1
BraA06t25187Z Brassica rapa HOM05D005175 ORTHO05D006302 7.4e-32 140.6 75 84.0
Glyma.09G261100 Glycine max HOM05D005175 ORTHO05D006302 7.4e-32 140.6 115 60.9
Hma1.2p1_0774F.1_g216280 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 9.7e-32 140.2 75 84.0
Hund19520 Selenicereus undatus HOM05D005175 ORTHO05D006302 1.3e-31 139.8 72 91.7
Aqoxy7G01494 Aquilegia oxysepala HOM05D005175 ORTHO05D006302 2.2e-31 139.0 115 61.7
CDE02G3559 Ceratophyllum demersum HOM05D005175 ORTHO05D006302 2.8e-31 138.7 115 59.1
Lj1g0020257 Lotus japonicus HOM05D005175 ORTHO05D006302 3.7e-31 138.3 116 61.2
TPR.G26940 Trifolium pratense HOM05D005175 ORTHO05D006302 3.7e-31 138.3 115 61.7
Medtr7g076910 Medicago truncatula HOM05D005175 ORTHO05D006302 4.8e-31 137.9 115 59.1
Ah.15g099330 Amaranthus hybridus HOM05D005175 ORTHO05D006302 6.3e-31 137.5 115 59.1
A06p20990 Brassica napus HOM05D005175 ORTHO05D006302 6.3e-31 137.5 75 82.7
RcHm_v2.0_Chr6g0305271 Rosa chinensis HOM05D005175 ORTHO05D006302 6.3e-31 137.5 75 86.7
AL1G56380 Arabidopsis lyrata HOM05D005175 ORTHO05D006302 8.2e-31 137.1 75 81.3
Aqoxy5G03197 Aquilegia oxysepala HOM05D005175 ORTHO05D006302 1.1e-30 136.7 117 58.1
Glyma.18G230900 Glycine max HOM05D005175 ORTHO05D006302 1.4e-30 136.3 115 58.3
TWI32G0813 Tripterygium wilfordii HOM05D005175 ORTHO05D006302 2.4e-30 135.6 114 59.6
Ca_07899_v3 Cicer arietinum L. HOM05D005175 ORTHO05D006302 3.1e-30 135.2 115 57.4
Phvul.008G066200 Phaseolus vulgaris HOM05D005175 ORTHO05D006302 4.1e-30 134.8 115 61.7
Psat3g109920 Pisum sativum HOM05D005175 ORTHO05D006302 4.1e-30 134.8 118 56.8
Psat3g124840 Pisum sativum HOM05D005175 ORTHO05D006302 4.1e-30 134.8 118 56.8
AUR62041709 Chenopodium quinoa HOM05D005175 ORTHO05D006302 2.6e-29 132.1 103 67.0
Lalb_Chr08g0233831 Lupinus albus HOM05D005175 ORTHO05D006302 2.6e-29 132.1 113 57.5
HPP92_018407 Vanilla planifolia HOM05D005175 ORTHO05D006302 7.7e-29 130.6 112 57.1
MSTRG.11700 Avicennia marina HOM05D005175 ORTHO05D006302 3.8e-28 128.3 121 54.5
Psat0s4355g0080 Pisum sativum HOM05D005175 ORTHO05D006302 3.8e-28 128.3 72 80.6
Migut.A00211 Erythranthe guttata HOM05D005175 ORTHO05D006302 5.0e-28 127.9 121 54.5
Zm00001eb210560 Zea mays HOM05D005175 ORTHO05D006302 6.5e-28 127.5 119 53.8
Os03g0854200 Oryza sativa ssp. japonica HOM05D005175 ORTHO05D006302 8.5e-28 127.1 115 54.8
Ciclev10010872m.g Citrus clementina HOM05D005175 ORTHO05D006302 1.6e-21 106.3 75 70.7
Mapoly0050s0095 Marchantia polymorpha HOM05D005175 ORTHO05D006302 5.9e-21 104.4 111 49.5
Pp3c4_10290 Physcomitrium patens HOM05D005175 ORTHO05D006302 1.7e-20 102.8 118 44.9
AagrBONN_evm.TU.Sc2ySwM_369.362 Anthoceros agrestis HOM05D005175 ORTHO05D006302 1.5e-19 99.8 117 46.2
AagrBONN_evm.TU.Sc2ySwM_228.4701 Anthoceros agrestis HOM05D005175 ORTHO05D006302 5.5e-19 97.8 117 45.3
Zm00001eb389000 Zea mays HOM05D001423 ORTHO05D004006 1.6e-18 96.3 68 63.2
SEGI_05611 Sequoiadendron giganteum HOM05D005175 ORTHO05D006302 4.7e-18 94.7 115 48.7
Zm00001eb265700 Zea mays HOM05D003504 ORTHO05D004006 4.7e-18 94.7 68 61.8
Zm00001eb292470 Zea mays HOM05D001423 ORTHO05D000709 1.2e-16 90.1 68 57.4
Dinv27896 Davidia involucrata HOM05D005175 ORTHO05D006302 4.4e-16 88.2 43 90.7
CBR_g16978 Chara braunii HOM05D005175 ORTHO05D006302 6.3e-15 84.3 114 39.5
ATR0705G208 Amborella trichopoda HOM05D005175 ORTHO05D006302 3.5e-13 78.6 80 50.0
Cre14.g624500 Chlamydomonas reinhardtii HOM05D005175 ORTHO05D006302 2.9e-12 75.5 70 51.4
FAN28G1291 Fragaria x ananassa HOM05D005175 ORTHO05D006302 9.4e-11 70.5 37 86.5
AL9U12120 Arabidopsis lyrata HOM05D005175 ORTHO05D006302 1.4e-09 66.6 33 90.9
FAN09G0664 Fragaria x ananassa HOM05D005175 ORTHO05D006302 3.0e-09 65.5 33 90.9
AL2G32490 Arabidopsis lyrata HOM05D005175 ORTHO05D021408 3.4e-08 62.0 40 70.0
Cre06.g284500 Chlamydomonas reinhardtii HOM05D004050 ORTHO05D005162 1.7e-07 59.7 60 50.0
Gohir.A06G093501 Gossypium hirsutum HOM05D005175 ORTHO05D006302 4.8e-07 58.2 33 75.8
MCO03G324 Micromonas commoda HOM05D005175 ORTHO05D006302 1.4e-06 56.6 111 34.2
Gorai.010G107600 Gossypium raimondii HOM05D005175 ORTHO05D006302 2.4e-06 55.8 33 72.7


User provided reference genes

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